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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:16.6 nTPM
HPA Brain:41.3 nTPM
GTEx:16.6 nTPM
Pig:13.1 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

41.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 19.3
2226 Male, age 75, left hemisphere 21.9
1961 Female, age 42, unknown 16.7
Dorsomedial nucleus
nTPM: 26.8
2017 Female, age 42, unknown 28.9
2041 Female, age 72, unknown 27.4
1989 Male, age 62, unknown 24.1
Lateral hypothalamic area
nTPM: 29.3
2271 Male, age 75, both hemispheres 31.5
2412 Male, age 62, unknown 29.7
2228 Male, age 66, unknown 28.2
1791 Male, age 80, right hemisphere 27.5
Mammillary body
nTPM: 41.3
1945 Male, age 80, right hemisphere 51.5
1834 Female, age 42, unknown 48.5
1948 Female, age 72, unknown 44.8
1923 Female, age 72, unknown 34.4
2413 Male, age 66, unknown 27.5
Paraventricular nucleus
nTPM: 40.9
2700 Male, age 62, unknown 40.9
Preoptic area
nTPM: 32.1
2414 Female, age 72, unknown 43.9
1861 Female, age 42, unknown 28.0
1907 Male, age 80, right hemisphere 24.4
Supraoptic nucleus
nTPM: 31.6
1894 Female, age 72, unknown 33.0
2043 Male, age 62, unknown 32.4
2835 Female, age 72, unknown 29.4
Ventromedial nucleus
nTPM: 22.4
1982 Female, age 72, unknown 26.1
1822 Female, age 42, unknown 18.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

16.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 16.6
Samples: 257

Max nTPM: 146.6
Min nTPM: 4.2
Std nTPM: 13.5
Median nTPM: 13.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 146.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 91.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 85.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 83.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 73.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 50.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 42.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 41.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 35.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 34.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 34.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 33.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 32.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 30.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 30.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 29.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 29.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 29.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 29.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 28.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 28.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 25.4
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 25.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 24.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 24.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 23.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 23.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 23.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 23.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 22.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 22.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 22.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 22.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 21.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 21.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 21.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 21.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 21.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 20.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 20.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 20.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 20.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 20.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 19.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 19.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 19.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 19.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 19.5
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 19.5
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 19.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 19.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 19.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 19.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 19.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 19.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 19.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 18.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 18.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 18.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 18.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 18.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 18.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 18.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 18.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 18.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 18.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 18.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 18.3
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 18.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 17.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 17.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 17.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 17.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 17.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 17.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 17.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 17.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 17.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 17.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 17.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 17.1
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 16.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 16.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 16.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 16.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 16.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 16.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 16.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 16.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 16.2
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 16.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 16.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 16.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 15.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 15.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 15.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 15.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 15.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 15.4
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 15.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 15.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 15.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 15.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 14.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 14.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 14.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 14.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 14.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 14.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 14.6
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 14.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 14.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 14.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 14.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 14.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 14.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 14.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 14.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 14.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 14.3
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 14.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 14.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 14.0
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 13.9
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 13.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 13.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 13.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 13.8
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 13.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 13.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 13.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 13.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 13.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 13.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 13.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 13.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 13.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 13.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 13.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 13.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 13.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 13.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 13.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 13.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 13.0
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 12.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 12.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 12.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 12.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 12.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 12.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 12.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 12.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 12.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 12.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 12.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 12.5
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 12.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 12.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 12.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 12.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 12.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 12.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 12.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 11.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 11.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 11.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 11.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 11.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 11.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 11.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 11.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 11.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 11.3
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 11.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 11.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 11.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 11.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 11.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 11.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 11.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 11.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 11.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 11.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 10.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 10.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 10.8
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 10.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 10.7
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 10.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 10.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 10.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 10.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 10.6
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 10.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 10.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 10.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 10.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 10.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 10.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 10.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 10.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 10.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 10.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 10.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 10.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 10.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 10.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 9.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 9.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 9.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 9.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 9.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 9.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 9.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 9.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 9.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 9.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 9.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 9.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 9.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 9.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 9.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 9.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 9.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 9.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 8.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 8.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 8.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 8.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 8.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 8.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 8.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 8.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 8.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 8.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 8.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 8.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 8.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 8.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 8.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 8.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 7.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 7.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 7.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 7.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 7.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 6.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 6.3
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 6.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 5.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 5.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 5.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 5.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 5.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 4.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 4.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

13.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 13.1
Samples: 4

Max nTPM: 16.1
Min nTPM: 11.5
Sample A Female 16.1
Sample B Female 11.5
Sample C Male 12.7
Sample D Male 12.2

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