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  • TISSUE

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  • UFM1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:37.5 nTPM
HPA Brain:58.3 nTPM
GTEx:37.5 nTPM
Pig:86.1 nTPM
Mouse:18.9 nTPM
Allen mouse:0.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

58.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 45.3
2226 Male, age 75, left hemisphere 48.5
1961 Female, age 42, unknown 42.1
Dorsomedial nucleus
nTPM: 42.6
2041 Female, age 72, unknown 51.2
2017 Female, age 42, unknown 44.7
1989 Male, age 62, unknown 31.8
Lateral hypothalamic area
nTPM: 51.5
1791 Male, age 80, right hemisphere 55.0
2412 Male, age 62, unknown 54.1
2228 Male, age 66, unknown 50.8
2271 Male, age 75, both hemispheres 46.0
Mammillary body
nTPM: 48.1
1923 Female, age 72, unknown 52.4
1948 Female, age 72, unknown 49.3
1945 Male, age 80, right hemisphere 48.3
2413 Male, age 66, unknown 47.3
1834 Female, age 42, unknown 43.2
Paraventricular nucleus
nTPM: 45.1
2700 Male, age 62, unknown 45.1
Preoptic area
nTPM: 51.7
1907 Male, age 80, right hemisphere 55.2
2414 Female, age 72, unknown 51.7
1861 Female, age 42, unknown 48.0
Supraoptic nucleus
nTPM: 58.3
2043 Male, age 62, unknown 66.3
1894 Female, age 72, unknown 61.4
2835 Female, age 72, unknown 47.2
Ventromedial nucleus
nTPM: 41.2
1822 Female, age 42, unknown 43.8
1982 Female, age 72, unknown 38.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

37.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 37.5
Samples: 257

Max nTPM: 59.2
Min nTPM: 24.4
Std nTPM: 6.5
Median nTPM: 36.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 59.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 58.8
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 56.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 55.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 55.0
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 54.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 53.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 52.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 51.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 50.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 49.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 49.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 49.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 48.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 48.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 48.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 48.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 48.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 47.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 47.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 47.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 47.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 47.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 46.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 46.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 46.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 46.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 46.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 46.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 45.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 45.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 45.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 45.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 45.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 45.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 45.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 44.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 44.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 44.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 43.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 43.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 43.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 43.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 43.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 43.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 43.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 43.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 43.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 43.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 43.0
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 42.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 42.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 42.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 42.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 42.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 42.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 41.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 41.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 41.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 41.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 41.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 41.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 41.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 41.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 41.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 41.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 41.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 41.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 41.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 41.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 40.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 40.8
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 40.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 40.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 40.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 40.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 40.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 40.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 40.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 40.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 39.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 39.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 39.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 39.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 39.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 39.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 39.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 39.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 39.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 39.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 39.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 39.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 38.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 38.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 38.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 38.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 38.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 38.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 38.5
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 38.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 38.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 38.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 38.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 38.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 38.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 38.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 38.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 38.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 38.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 38.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 38.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 37.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 37.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 37.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 37.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 37.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 37.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 37.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 36.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 36.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 36.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 36.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 36.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 36.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 36.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 36.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 36.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 36.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 36.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 36.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 36.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 36.2
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 36.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 36.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 36.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 36.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 36.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 35.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 35.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 35.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 35.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 35.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 35.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 35.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 35.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 35.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 35.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 35.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 35.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 35.4
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 35.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 35.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 35.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 35.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 35.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 35.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 34.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 34.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 34.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 34.9
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 34.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 34.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 34.7
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 34.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 34.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 34.5
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 34.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 34.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 34.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 34.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 34.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 34.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 34.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 34.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 34.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 34.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 34.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 33.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 33.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 33.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 33.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 33.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 33.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 33.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 33.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 33.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 33.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 33.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 33.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 33.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 33.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 33.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 33.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 32.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 32.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 32.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 32.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 32.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 32.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 32.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 32.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 32.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 32.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 32.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 32.3
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 32.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 32.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 32.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 32.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 32.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 32.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 32.0
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 32.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 31.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 31.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 31.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 31.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 31.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 31.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 31.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 31.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 31.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 31.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 31.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 31.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 30.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 30.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 30.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 30.2
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 29.9
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 29.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 29.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 29.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 29.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 29.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 29.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 29.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 29.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 29.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 28.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 28.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 28.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 28.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 28.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 28.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 27.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 27.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 27.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 26.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 26.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 26.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 25.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 25.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 25.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 24.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 24.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 24.4
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

86.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 86.1
Samples: 4

Max nTPM: 102.6
Min nTPM: 79.1
Sample A Female 102.6
Sample B Female 82.7
Sample C Male 79.1
Sample D Male 79.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

18.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 18.9
Samples: 4

Max nTPM: 19.6
Min nTPM: 17.9
Sample A Male 17.9
Sample B Male 18.6
Sample C Female 19.3
Sample D Female 19.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.6
72129283 Antisense, RP_051017_03_F04, Mouse strain C57BL/6J (56 days, male) 1.0
69117014 Antisense, RP_050321_01_E12, Mouse strain C57BL/6J (56 days, male) 0.3

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