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  • TISSUE

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  • SCPEP1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:27.5 nTPM
HPA Brain:19.5 nTPM
GTEx:27.5 nTPM
Pig:30.1 nTPM
Mouse:22.1 nTPM
Allen mouse:0.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

19.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 14.2
2226 Male, age 75, left hemisphere 14.8
1961 Female, age 42, unknown 13.6
Dorsomedial nucleus
nTPM: 11.8
2041 Female, age 72, unknown 17.4
2017 Female, age 42, unknown 10.2
1989 Male, age 62, unknown 7.9
Lateral hypothalamic area
nTPM: 14.3
2271 Male, age 75, both hemispheres 17.1
1791 Male, age 80, right hemisphere 15.5
2412 Male, age 62, unknown 12.5
2228 Male, age 66, unknown 12.0
Mammillary body
nTPM: 10.6
1923 Female, age 72, unknown 13.5
2413 Male, age 66, unknown 10.8
1945 Male, age 80, right hemisphere 10.7
1948 Female, age 72, unknown 9.8
1834 Female, age 42, unknown 8.1
Paraventricular nucleus
nTPM: 8.8
2700 Male, age 62, unknown 8.8
Preoptic area
nTPM: 9.6
1907 Male, age 80, right hemisphere 11.1
1861 Female, age 42, unknown 9.9
2414 Female, age 72, unknown 7.9
Supraoptic nucleus
nTPM: 19.5
1894 Female, age 72, unknown 23.6
2043 Male, age 62, unknown 19.9
2835 Female, age 72, unknown 15.0
Ventromedial nucleus
nTPM: 12.9
1822 Female, age 42, unknown 15.0
1982 Female, age 72, unknown 10.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

27.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 27.5
Samples: 257

Max nTPM: 54.8
Min nTPM: 9.4
Std nTPM: 7.9
Median nTPM: 26.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 54.8
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 49.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 48.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 47.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 46.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 46.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 46.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 46.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 45.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 45.1
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 44.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 44.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 44.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 43.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 43.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 41.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 41.4
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 40.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 40.6
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 40.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 40.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 40.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 39.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 39.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 38.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 38.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 38.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 37.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 37.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 37.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 36.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 36.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 35.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 35.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 35.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 35.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 35.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 35.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 34.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 34.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 34.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 34.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 34.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 34.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 34.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 34.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 34.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 34.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 33.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 33.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 33.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 33.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 33.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 33.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 33.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 33.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 33.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 33.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 32.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 32.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 32.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 32.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 32.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 32.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 32.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 32.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 32.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 32.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 31.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 31.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 31.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 31.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 31.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 31.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 31.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 31.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 31.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 31.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 30.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 30.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 30.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 30.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 30.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 30.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 30.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 30.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 29.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 29.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 29.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 29.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 29.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 29.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 29.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 29.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 29.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 29.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 29.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 29.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 28.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 28.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 28.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 28.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 28.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 28.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 28.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 28.3
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 28.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 28.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 28.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 28.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 27.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 27.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 27.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 27.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 27.8
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 27.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 27.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 27.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 27.5
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 27.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 27.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 27.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 27.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 26.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 26.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 26.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 26.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 26.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 26.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 26.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 26.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 26.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 26.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 26.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 26.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 25.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 25.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 25.7
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 25.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 25.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 25.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 25.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 25.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 25.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 25.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 25.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 25.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 25.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 25.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 24.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 24.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 24.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 24.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 24.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 24.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 24.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 24.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 24.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 24.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 24.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 24.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 24.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 24.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 24.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 24.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 23.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 23.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 23.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 23.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 23.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 23.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 23.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 23.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 23.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 23.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 23.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 23.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 23.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 23.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 23.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 23.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 23.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 23.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 22.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 22.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 22.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 22.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 22.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 22.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 22.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 22.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 22.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 22.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 22.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 22.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 22.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 21.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 21.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 21.5
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 21.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 21.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 21.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 21.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 21.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 21.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 20.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 20.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 20.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 20.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 20.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 20.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 20.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 20.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 20.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 19.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 19.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 19.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 19.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 19.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 19.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 19.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 19.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 19.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 19.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 18.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 18.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 18.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 18.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 18.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 18.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 18.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 18.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 18.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 17.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 17.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 17.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 17.7
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 17.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 17.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 17.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 16.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 16.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 16.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 16.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 16.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 16.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 15.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 15.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 15.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 15.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 14.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 14.5
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 13.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 13.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 10.5
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 10.5
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 9.4
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

30.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 30.2
Samples: 4

Max nTPM: 37.8
Min nTPM: 23.8
Sample A Female 37.8
Sample B Female 30.2
Sample C Male 28.8
Sample D Male 23.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

22.1
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 22.1
Samples: 4

Max nTPM: 22.8
Min nTPM: 21.2
Sample A Male 22.5
Sample B Male 22.8
Sample C Female 22.0
Sample D Female 21.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.1
67979030 Antisense, RP_040923_02_A11, Mouse strain C57BL/6J (56 days, male) 0.1

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