We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
262.0
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 258.6
2586
Male, age 75, left hemisphere
382.0
2411
Female, age 72, unknown
273.8
2666
Male, age 74, left hemisphere
269.9
1833
Male, age 53, unknown
254.6
2019
Male, age 18, unknown
245.4
1830
Male, age 51, unknown
245.2
1870
Female, age 42, unknown
242.3
2828
Female, age 72, unknown
233.1
2219
Male, age 76, both hemispheres
220.5
1827
Male, age 72, unknown
219.2
Dorsal raphe nucleus nTPM: 219.7
2750
Male, age 76, both hemispheres
316.2
2047
Male, age 72, unknown
214.8
1828
Male, age 53, unknown
194.9
2298
Female, age 72, unknown
187.7
2016
Female, age 72, unknown
185.0
Inferior colliculus nTPM: 178.1
1890
Male, age 53, unknown
190.3
1848
Female, age 42, unknown
185.4
2849
Male, age 72, unknown
185.3
2097
Female, age 72, unknown
151.4
Median raphe nucleus nTPM: 234.7
2220
Male, age 76, midline
234.7
Periaquaductal grey, anterior nTPM: 226.4
1947
Male, age 18, unknown
241.7
1795
Male, age 51, unknown
225.2
2502
Female, age 75, unknown
212.3
Periaquaductal grey, dorsal nTPM: 176.0
2464
Female, age 72, unknown
194.7
1831
Male, age 72, unknown
185.4
1840
Male, age 53, unknown
163.4
2850
Male, age 76, both hemispheres
160.3
Periaquaductal grey, lateral nTPM: 168.7
2053
Male, age 18, unknown
182.5
2272
Male, age 74, both hemispheres
178.8
2140
Male, age 76, both hemispheres
144.8
Pretectal area nTPM: 215.0
2007
Male, age 72, unknown
263.7
1815
Male, age 53, unknown
253.9
1817
Female, age 42, unknown
246.6
2407
Male, age 75, both hemispheres
238.2
1816
Male, age 51, unknown
228.8
1944
Female, age 72, unknown
227.9
2825
Male, age 18, unknown
203.9
2316
Male, age 76, right hemisphere
193.8
2224
Female, age 72, unknown
179.4
2667
Female, age 75, unknown
173.6
2273
Male, age 74, both hemispheres
155.3
Red nucleus nTPM: 262.0
1904
Male, age 53, unknown
291.4
1865
Male, age 51, unknown
283.6
2584
Male, age 75, left hemisphere
281.2
2785
Male, age 18, unknown
279.8
2588
Male, age 74, left hemisphere
274.2
2769
Male, age 72, unknown
269.2
2227
Male, age 72, unknown
260.0
2823
Male, age 76, right hemisphere
259.6
1821
Female, age 72, unknown
251.9
2503
Female, age 72, unknown
247.2
1954
Female, age 42, unknown
227.3
2725
Female, age 75, unknown
218.6
Substantia nigra nTPM: 242.0
2583
Male, age 75, right hemisphere
288.9
1916
Female, age 42, unknown
279.4
1851
Male, age 51, unknown
271.9
2665
Male, age 74, both hemispheres
261.9
1889
Female, age 72, unknown
237.5
2590
Female, age 75, unknown
227.8
2699
Male, age 18, unknown
224.6
1941
Male, age 53, unknown
221.0
2409
Female, age 72, unknown
205.6
2241
Male, age 72, unknown
201.4
Superior colliculus nTPM: 241.1
2668
Female, age 75, unknown
388.3
1913
Female, age 42, unknown
246.5
1995
Male, age 72, unknown
234.0
2664
Male, age 75, both hemispheres
233.5
1796
Male, age 53, unknown
230.1
2261
Male, age 18, unknown
220.3
2087
Female, age 72, unknown
220.1
2587
Male, age 74, left hemisphere
216.7
1839
Male, age 51, unknown
211.9
1895
Male, age 76, right hemisphere
209.1
Ventral tegmental area nTPM: 251.1
2223
Female, age 72, unknown
291.9
2410
Female, age 72, unknown
275.9
1915
Female, age 42, unknown
244.1
2218
Male, age 76, both hemispheres
242.2
2021
Male, age 53, unknown
232.0
1942
Male, age 51, unknown
220.5
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
145.0
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 145.0
Samples: 183
Max nTPM: 296.7
Min nTPM: 74.0
Std nTPM: 36.3
Median nTPM: 143.7
GTEX-1N5O9-0011-R2a-SM-G8LM1
60-69 years, male
296.7
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
268.8
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
264.7
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
239.0
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
235.9
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
231.2
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
231.0
GTEX-1JJ6O-0011-R2a-SM-EY5ZO
60-69 years, male
219.7
GTEX-ZAK1-0011-R2a-SM-GPRX1
50-59 years, female
214.4
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
213.4
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
203.5
GTEX-1RDX4-0011-R2b-SM-F649Z
50-59 years, female
200.6
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
200.6
GTEX-1R9K4-0011-R2b-SM-G8LLF
60-69 years, male
196.8
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
196.5
GTEX-1O9I2-0011-R2b-SM-F3K53
50-59 years, male
194.0
GTEX-1JN1M-0011-R2b-SM-G9EPE
60-69 years, female
193.5
GTEX-1PIIG-0011-R2b-SM-F648W
30-39 years, male
189.7
GTEX-117XS-0011-R2b-SM-GI4VT
60-69 years, male
187.3
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
185.0
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
182.2
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
181.6
GTEX-16GPK-0011-R2a-SM-GRR1F
60-69 years, male
180.5
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
178.1
GTEX-1PPGY-0011-R2b-SM-F33YW
60-69 years, male
177.8
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
176.8
GTEX-1LKK1-0011-R2b-SM-G8OLT
50-59 years, female
176.6
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
176.2
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
175.4
GTEX-1JMQJ-0011-R2a-SM-F6493
50-59 years, male
175.0
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
174.4
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
173.9
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
173.3
GTEX-1N2EE-0011-R2a-SM-F649F
60-69 years, male
173.0
GTEX-1CB4J-0011-R2a-SM-9WG5N
60-69 years, male
172.4
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
171.0
GTEX-15G19-0011-R2b-SM-H6Q7S
60-69 years, male
171.0
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
169.0
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
166.9
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
166.0
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
164.0
GTEX-1PWST-0011-R2b-SM-F3K5I
70-79 years, male
162.9
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
161.7
GTEX-1IDJH-0011-R2a-SM-GPI9D
70-79 years, male
161.6
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
161.4
GTEX-1I19N-0011-R2b-SM-GPRYG
70-79 years, male
161.0
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
160.7
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
160.4
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
159.8
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
159.5
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
158.9
GTEX-1QMI2-0011-R2b-SM-F648R
60-69 years, male
158.1
GTEX-1POEN-0011-R2b-SM-G8LLP
30-39 years, female
157.2
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
157.1
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
157.0
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
157.0
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
155.7
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
155.3
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
154.8
GTEX-ZAJG-0011-R2a-SM-GNTAX
50-59 years, female
154.8
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
154.5
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
154.1
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
154.0
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
154.0
GTEX-1HBPH-0011-R2a-SM-GQ1DS
40-49 years, female
153.5
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
153.1
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
152.9
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
151.9
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
151.7
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
151.1
GTEX-11TTK-0011-R2b-SM-GJ3PU
60-69 years, female
151.0
GTEX-1R9PO-0011-R2a-SM-F2TBH
60-69 years, female
150.8
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
150.6
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
150.4
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
149.7
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
149.6
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
149.1
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
148.8
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
148.8
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
148.5
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
148.5
GTEX-1N2EF-0011-R2b-SM-F6482
60-69 years, male
148.2
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
148.0
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
147.8
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
147.7
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
147.6
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
147.2
GTEX-11NUK-0011-R2a-SM-GINAO
50-59 years, male
147.0
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
146.6
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
146.3
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
143.9
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
143.7
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
143.3
GTEX-13OW7-0011-R2b-SM-H6Q8E
50-59 years, male
142.5
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
142.3
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
141.8
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
141.8
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
140.9
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
139.8
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
139.8
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
139.3
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
138.8
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
138.7
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
138.3
GTEX-ZYY3-0011-R2a-SM-GNTB2
60-69 years, female
138.2
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
138.0
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
137.9
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
137.9
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
135.6
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
135.5
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
134.6
GTEX-1LSVX-0011-R2a-SM-G8OL9
60-69 years, male
133.7
GTEX-ZZPT-0011-R2a-SM-GNTB1
50-59 years, male
133.5
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
132.0
GTEX-12696-0011-R2b-SM-GHWPY
60-69 years, male
130.9
GTEX-1JMPZ-0011-R2a-SM-G8LLS
30-39 years, male
129.0
GTEX-1RQED-0011-R2a-SM-F3K5T
60-69 years, male
128.8
GTEX-15SHU-0011-R2a-SM-GPRXS
40-49 years, female
127.6
GTEX-RN5K-0011-R2A-SM-GQ1CA
50-59 years, female
127.4
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
126.9
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
126.8
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
126.6
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
125.5
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
125.3
GTEX-1NV5F-0011-R2a-SM-G8LME
60-69 years, female
125.1
GTEX-1KD5A-0011-R2b-SM-G9EPP
50-59 years, male
125.0
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
124.6
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
123.9
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
123.9
GTEX-111FC-0011-R2a-SM-GIN8S
60-69 years, male
123.2
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
122.8
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
122.4
GTEX-1KD4Q-0011-R2a-SM-F649I
40-49 years, male
121.6
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
121.4
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
120.5
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
119.7
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
118.5
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
118.5
GTEX-1MCQQ-0011-R2a-SM-F649V
60-69 years, male
118.5
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
118.4
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
118.3
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
117.6
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
117.6
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
117.2
GTEX-1P4AB-0011-R2a-SM-F649K
50-59 years, male
117.1
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
116.5
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
115.2
GTEX-1NV8Z-0011-R2b-SM-F648N
60-69 years, male
115.2
GTEX-1MJK2-0011-R2b-SM-EXUS5
50-59 years, male
114.9
GTEX-1RQEC-0011-R2b-SM-EY5ZT
60-69 years, male
114.3
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
114.2
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
112.8
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
112.4
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
110.2
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
110.2
GTEX-13OVL-0011-R2b-SM-H65ZN
50-59 years, male
110.1
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
107.6
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
107.4
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
107.0
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
106.9
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
106.7
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
106.0
GTEX-1192X-0011-R2b-SM-GI4VV
50-59 years, male
103.9
GTEX-X4EP-0011-R2B-SM-3P625
60-69 years, female
103.5
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
103.3
GTEX-1LG7Y-0011-R2b-SM-G8LMM
50-59 years, male
100.5
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
100.3
GTEX-1117F-0011-R2b-SM-GI4VL
60-69 years, female
99.8
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
99.5
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
98.9
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
98.3
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
96.9
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
96.9
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
94.3
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
91.2
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
91.1
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
88.9
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
88.6
GTEX-1KWVE-0011-R2a-SM-G8OLX
30-39 years, male
86.3
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
85.4
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
83.6
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
77.0
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
74.0
Show allShow less
MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
195.2
Pig sample
Sample description
nTPM
Substantia nigra nTPM: 173.4
Samples: 4
Max nTPM: 203.5
Min nTPM: 118.2
Sample A
Female
203.5
Sample B
Female
118.2
Sample C
Male
175.5
Sample D
Male
196.3
Midbrain nTPM: 195.2
Samples: 4
Max nTPM: 295.5
Min nTPM: 134.4
Sample A
Female
295.5
Sample B
Female
162.3
Sample C
Male
188.4
Sample D
Male
134.4
Periaqueductal gray nTPM: 121.9
Samples: 3
Max nTPM: 138.8
Min nTPM: 106.0
Sample B
Female
138.8
Sample C
Male
121.0
Sample D
Male
106.0
Superior colliculi nTPM: 164.6
Samples: 4
Max nTPM: 203.4
Min nTPM: 105.6
Sample A
Female
175.5
Sample B
Female
105.6
Sample C
Male
203.4
Sample D
Male
174.0
MIDBRAIN - Mouse RNA-seqi
RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
131.8
Mouse sample
Sample description
nTPM
Midbrain nTPM: 131.9
Samples: 4
Max nTPM: 146.0
Min nTPM: 121.6
Sample A
Male
146.0
Sample B
Male
122.2
Sample C
Female
121.6
Sample D
Female
137.7
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.