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  • TISSUE

  • BRAIN

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:178.5 nTPM
HPA Brain:142.9 nTPM
GTEx:178.5 nTPM
Pig:98.1 nTPM
Mouse:224.3 nTPM
Allen mouse:9.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

142.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 111.3
2226 Male, age 75, left hemisphere 128.5
1961 Female, age 42, unknown 94.1
Dorsomedial nucleus
nTPM: 103.8
1989 Male, age 62, unknown 119.0
2017 Female, age 42, unknown 97.3
2041 Female, age 72, unknown 95.0
Lateral hypothalamic area
nTPM: 142.9
2228 Male, age 66, unknown 176.0
2271 Male, age 75, both hemispheres 164.9
1791 Male, age 80, right hemisphere 143.1
2412 Male, age 62, unknown 87.8
Mammillary body
nTPM: 128.8
1923 Female, age 72, unknown 164.7
1948 Female, age 72, unknown 125.3
2413 Male, age 66, unknown 119.4
1945 Male, age 80, right hemisphere 117.9
1834 Female, age 42, unknown 116.6
Paraventricular nucleus
nTPM: 103.5
2700 Male, age 62, unknown 103.5
Preoptic area
nTPM: 107.4
1907 Male, age 80, right hemisphere 112.8
2414 Female, age 72, unknown 110.4
1861 Female, age 42, unknown 99.0
Supraoptic nucleus
nTPM: 106.4
1894 Female, age 72, unknown 109.7
2835 Female, age 72, unknown 107.5
2043 Male, age 62, unknown 102.2
Ventromedial nucleus
nTPM: 104.8
1982 Female, age 72, unknown 118.4
1822 Female, age 42, unknown 91.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

178.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 178.5
Samples: 257

Max nTPM: 282.5
Min nTPM: 85.1
Std nTPM: 34.1
Median nTPM: 177.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 282.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 281.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 277.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 272.8
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 268.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 263.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 260.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 251.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 247.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 245.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 244.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 244.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 242.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 236.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 234.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 232.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 229.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 227.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 226.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 226.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 226.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 225.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 224.4
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 223.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 222.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 222.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 222.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 219.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 218.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 217.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 217.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 215.8
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 215.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 214.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 212.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 212.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 211.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 211.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 211.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 211.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 210.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 209.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 208.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 208.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 207.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 207.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 206.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 206.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 204.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 203.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 202.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 201.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 201.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 200.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 200.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 200.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 200.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 200.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 199.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 199.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 198.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 198.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 198.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 198.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 198.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 197.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 196.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 195.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 195.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 195.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 195.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 195.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 195.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 195.0
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 194.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 194.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 193.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 192.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 192.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 192.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 192.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 192.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 191.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 191.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 191.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 190.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 190.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 190.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 190.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 190.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 190.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 189.7
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 189.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 189.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 189.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 189.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 188.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 188.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 187.7
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 187.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 187.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 187.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 187.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 186.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 186.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 186.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 186.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 186.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 185.5
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 185.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 185.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 184.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 184.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 182.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 182.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 182.0
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 181.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 181.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 181.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 181.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 180.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 180.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 179.7
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 179.3
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 179.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 179.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 178.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 178.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 177.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 177.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 177.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 177.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 176.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 176.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 175.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 175.6
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 175.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 175.0
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 174.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 174.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 174.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 174.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 174.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 173.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 172.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 172.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 172.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 172.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 172.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 171.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 171.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 170.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 170.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 170.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 169.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 169.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 169.0
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 167.9
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 167.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 167.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 165.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 165.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 165.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 165.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 164.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 164.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 164.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 164.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 164.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 164.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 164.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 164.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 164.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 163.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 163.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 162.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 162.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 162.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 162.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 161.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 161.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 161.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 160.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 160.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 160.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 160.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 160.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 160.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 157.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 157.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 156.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 156.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 155.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 155.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 154.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 152.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 152.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 152.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 152.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 151.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 151.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 151.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 150.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 150.7
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 150.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 149.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 149.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 148.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 148.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 148.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 148.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 147.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 145.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 144.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 144.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 143.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 142.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 142.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 140.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 140.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 140.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 139.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 139.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 138.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 137.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 137.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 136.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 136.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 136.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 135.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 135.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 135.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 135.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 134.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 134.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 133.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 132.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 130.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 130.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 130.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 129.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 128.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 126.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 124.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 124.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 123.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 121.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 119.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 119.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 118.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 114.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 114.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 114.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 112.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 108.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 106.4
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 85.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

98.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 98.1
Samples: 4

Max nTPM: 126.4
Min nTPM: 82.1
Sample A Female 126.4
Sample B Female 95.0
Sample C Male 88.7
Sample D Male 82.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

224.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 224.4
Samples: 4

Max nTPM: 243.1
Min nTPM: 215.1
Sample A Male 215.1
Sample B Male 243.1
Sample C Female 222.2
Sample D Female 217.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

9.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 9.9
69838610 Antisense, RP_050310_02_C09, Mouse strain C57BL/6J (56 days, male) 9.9
74819690 Antisense, RP_060315_02_H06, Mouse strain C57BL/6J (56 days, male) 9.9

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