HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:10.2 nTPM
HPA Brain:8.0 nTPM
GTEx:10.2 nTPM
FANTOM5:20.3 Scaled Tags Per Million
Pig:15.7 nTPM
Mouse:41.3 nTPM
Allen mouse:0.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041838Antibody HPA048257Antibody CAB070171
Glial cells LowMediumLow
Neuronal cells MediumLowMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 8.0
Sample id Sample description nTPM
Hippocampus
nTPM: 6.6
2621 Female, age 67, right hemisphere 7.7
1898 Male, age 80, left hemisphere 7.5
1855 Male, age 76, left hemisphere 6.5
1911 Female, age 85, right hemisphere 6.5
2148 Female, age 91, left hemisphere 6.2
2529 Female, age 94, left hemisphere 5.3
Dentate gyrus
nTPM: 6.1
2010 Male, age 76, both hemispheres 6.8
2531 Female, age 67, both hemispheres 6.6
2246 Female, age 85, both hemispheres 5.8
2530 Female, age 94, left hemisphere 5.8
1927 Female, age 91, both hemispheres 5.7
2528 Male, age 74, both hemispheres 5.6
Entorhinal gyrus
nTPM: 6.4
2117 Female, age 91, right hemisphere 7.4
1938 Female, age 85, left hemisphere 7.3
2686 Male, age 75, right hemisphere 6.9
1787 Male, age 76, left hemisphere 5.8
2764 Male, age 80, right hemisphere 5.6
2613 Female, age 94, left hemisphere 5.2
Hippocampus, CA1
nTPM: 5.8
2045 Male, age 76, both hemispheres 8.4
1873 Female, age 85, both hemispheres 5.8
2527 Male, age 74, both hemispheres 5.3
2082 Female, age 91, right hemisphere 5.1
2749 Male, age 80, left hemisphere 4.2
Hippocampus, CA2
nTPM: 5.5
1892 Male, age 76, both hemispheres 7.6
2249 Male, age 74, both hemispheres 6.3
1940 Female, age 85, left hemisphere 6.1
2437 Female, age 94, left hemisphere 5.1
2113 Female, age 91, right hemisphere 4.9
1963 Male, age 80, left hemisphere 2.7
Hippocampus, CA3
nTPM: 5.5
2861 Female, age 67, both hemispheres 7.7
1867 Male, age 76, both hemispheres 6.2
1891 Female, age 85, both hemispheres 6.0
2620 Female, age 94, left hemisphere 5.0
2436 Male, age 74, both hemispheres 4.4
2137 Male, age 80, left hemisphere 3.8
Parahippocampal cortex
nTPM: 7.3
2622 Female, age 67, right hemisphere 9.2
1850 Male, age 80, both hemispheres 8.2
1933 Female, age 85, both hemispheres 7.8
2532 Female, age 72, left hemisphere 7.4
2693 Female, age 94, both hemispheres 7.3
2018 Male, age 76, both hemispheres 7.1
2250 Female, age 67, right hemisphere 7.1
2692 Male, age 74, both hemispheres 6.8
1990 Female, age 91, right hemisphere 6.0
2245 Female, age 91, both hemispheres 6.0
Perirhinal gyrus
nTPM: 8.0
1794 Male, age 80, right hemisphere 8.9
1841 Female, age 85, right hemisphere 8.5
2848 Male, age 76, right hemisphere 8.2
1847 Female, age 91, left hemisphere 7.7
2521 Female, age 94, right hemisphere 6.6
Subiculum
nTPM: 5.0
2729 Female, age 91, right hemisphere 6.6
1901 Male, age 80, both hemispheres 5.9
2619 Male, age 74, both hemispheres 5.9
2042 Male, age 76, both hemispheres 5.6
1977 Female, age 85, both hemispheres 5.3
2438 Female, age 94, left hemisphere 0.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 10.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.2
Samples: 255

Max nTPM: 23.5
Min nTPM: 2.2
Std nTPM: 2.4
Median nTPM: 10.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 23.5
GTEX-1O9I2-0011-R1a-SM-F2TAW 50-59 years, male 18.5
GTEX-1I19N-0011-R1b-SM-GOR1A 70-79 years, male 16.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 16.4
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 16.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 15.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 15.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 15.6
GTEX-ZZPT-0011-R1b-SM-GNINL 50-59 years, male 15.3
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 14.4
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 14.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 20.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.3
FF:10169-103B7 60 years, female 28.0
FF:10153-102I9 76 years, female 12.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 15.7
Pig sample Sample description nTPM
Subiculum
nTPM: 13.0
Samples: 4

Max nTPM: 14.2
Min nTPM: 11.9
Sample A Female 14.2
Sample B Female 11.9
Sample C Male 12.0
Sample D Male 13.8
Dorsal hippocampus
nTPM: 11.3
Samples: 4

Max nTPM: 12.5
Min nTPM: 9.7
Sample A Female 11.7
Sample B Female 9.7
Sample C Male 11.3
Sample D Male 12.5
Entorhinal cortex
nTPM: 15.7
Samples: 4

Max nTPM: 18.5
Min nTPM: 14.2
Sample A Female 18.5
Sample B Female 14.8
Sample C Male 14.2
Sample D Male 15.4
Ventral hippocampus
nTPM: 11.2
Samples: 4

Max nTPM: 14.4
Min nTPM: 8.8
Sample A Female 14.4
Sample B Female 11.7
Sample C Male 8.8
Sample D Male 10.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 41.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 41.3
Samples: 4

Max nTPM: 42.5
Min nTPM: 39.7
Sample A Male 40.7
Sample B Male 42.5
Sample C Female 42.2
Sample D Female 39.7
Hippocampal formation
nTPM: 41.3
Samples: 4

Max nTPM: 46.5
Min nTPM: 38.2
Sample A Male 46.5
Sample B Male 42.2
Sample C Female 38.2
Sample D Female 38.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
633301 Antisense, RP_040907_02_F09, Mouse strain C57BL/6J (56 days, male) 0.0

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