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  • TISSUE

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  • PAIP2B
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:61.5 nTPM
HPA Brain:128.5 nTPM
GTEx:61.5 nTPM
Pig:46.9 nTPM
Mouse:55.0 nTPM
Allen mouse:6.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

128.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 19.3
2226 Male, age 75, left hemisphere 21.0
1961 Female, age 42, unknown 17.6
Dorsomedial nucleus
nTPM: 53.5
2017 Female, age 42, unknown 83.2
1989 Male, age 62, unknown 43.8
2041 Female, age 72, unknown 33.6
Lateral hypothalamic area
nTPM: 67.9
2412 Male, age 62, unknown 99.4
2228 Male, age 66, unknown 72.8
2271 Male, age 75, both hemispheres 56.0
1791 Male, age 80, right hemisphere 43.3
Mammillary body
nTPM: 98.2
1948 Female, age 72, unknown 126.2
1945 Male, age 80, right hemisphere 123.1
1834 Female, age 42, unknown 114.9
1923 Female, age 72, unknown 67.8
2413 Male, age 66, unknown 59.2
Paraventricular nucleus
nTPM: 128.5
2700 Male, age 62, unknown 128.5
Preoptic area
nTPM: 81.7
2414 Female, age 72, unknown 126.7
1861 Female, age 42, unknown 93.7
1907 Male, age 80, right hemisphere 24.7
Supraoptic nucleus
nTPM: 68.7
2043 Male, age 62, unknown 77.2
2835 Female, age 72, unknown 65.0
1894 Female, age 72, unknown 63.9
Ventromedial nucleus
nTPM: 24.9
1982 Female, age 72, unknown 29.2
1822 Female, age 42, unknown 20.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

61.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 61.5
Samples: 257

Max nTPM: 683.4
Min nTPM: 3.4
Std nTPM: 81.8
Median nTPM: 36.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 683.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 611.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 523.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 449.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 294.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 278.2
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 271.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 216.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 213.0
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 203.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 193.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 190.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 185.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 182.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 176.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 169.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 167.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 161.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 139.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 138.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 136.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 135.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 131.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 129.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 127.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 127.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 126.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 125.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 124.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 123.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 123.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 123.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 119.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 118.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 117.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 115.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 110.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 109.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 108.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 100.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 99.5
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 99.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 99.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 97.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 96.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 90.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 89.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 87.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 84.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 84.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 84.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 83.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 82.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 81.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 81.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 80.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 79.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 79.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 77.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 76.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 73.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 72.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 71.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 70.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 70.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 70.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 69.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 68.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 68.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 67.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 66.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 65.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 65.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 64.2
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 64.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 64.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 63.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 63.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 63.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 62.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 62.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 61.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 61.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 60.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 60.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 59.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 57.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 57.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 56.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 54.6
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 53.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 51.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 51.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 51.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 50.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 50.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 49.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 49.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 49.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 49.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 47.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 47.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 47.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 46.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 46.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 46.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 45.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 45.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 45.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 45.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 44.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 44.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 43.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 43.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 43.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 43.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 42.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 41.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 40.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 40.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 39.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 38.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 38.4
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 37.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 37.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 37.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 37.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 36.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 36.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 36.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 35.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 35.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 34.7
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 34.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 34.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 33.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 33.4
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 33.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 33.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 33.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 32.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 32.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 32.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 31.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 31.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 30.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 30.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 29.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 29.6
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 29.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 28.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 28.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 28.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 28.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 28.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 28.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 27.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 27.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 27.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 26.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 26.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 26.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 25.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 25.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 24.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 24.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 24.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 24.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 23.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 23.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 23.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 23.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 22.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 22.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 22.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 22.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 22.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 22.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 22.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 21.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 21.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 21.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 20.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 20.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 20.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 20.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 20.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 19.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 19.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 19.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 19.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 19.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 18.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 18.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 18.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 17.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 17.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 17.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 17.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 17.5
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 17.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 17.4
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 17.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 17.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 16.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 16.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 16.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 16.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 15.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 15.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 15.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 15.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 15.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 15.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 15.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 14.9
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 14.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 14.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 14.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 14.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 13.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 13.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 13.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 13.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 13.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 13.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 13.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 13.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 13.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 12.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 12.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 12.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 12.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 12.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 11.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 11.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 11.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 9.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 9.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 9.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 9.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 9.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 9.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 9.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 8.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 8.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 8.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 8.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 8.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 8.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 7.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 6.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 6.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 6.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 5.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 4.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 3.4
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

46.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 46.9
Samples: 4

Max nTPM: 57.9
Min nTPM: 24.3
Sample A Female 57.9
Sample B Female 55.2
Sample C Male 50.2
Sample D Male 24.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

55.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 55.0
Samples: 4

Max nTPM: 58.3
Min nTPM: 51.7
Sample A Male 55.7
Sample B Male 58.3
Sample C Female 54.3
Sample D Female 51.7

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 6.5
71612166 Antisense, RP_050927_02_C01, Mouse strain C57BL/6J (56 days, male) 6.5

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