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TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
Tissue methods
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Follicle cells: Not detected
Ovarian stroma cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:3207.6 nTPM
HPA:2829.9 nTPM
GTEx:3207.6 nTPM
FANTOM5:1203.5 Scaled Tags Per Million
OVARY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA047268Antibody HPA048084
Follicle cells -Not detected
Ovarian stroma cells Not detectedNot detected





OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2829.9
overview
Female, age 64
Ovary sample 192
nTPM: 2167.8
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 2917.3
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 2074.3
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 1970.9
N/A
Female, age 16
Ovary sample 3663
nTPM: 6808.4
N/A
Female, age 20
Ovary sample 3664
nTPM: 2462.8
N/A
Female, age 32
Ovary sample 3665
nTPM: 1408.1

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3207.6
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 3207.6
Samples: 193

Max nTPM: 7157.3
Min nTPM: 1543.6
Std nTPM: 1047.8
Median nTPM: 3034.2
GTEX-13NZ8-2526-SM-H65ZM 60-69 years, female 7157.3
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 7033.9
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 6558.1
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 6436.3
GTEX-ZE7O-2226-SM-GNTC2 50-59 years, female 6072.7
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 5952.9
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 5765.9
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 5520.7
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 5302.4
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 5287.6
GTEX-183WM-1926-SM-72D5F 70-79 years, female 5199.1
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 5046.4
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 5004.2
GTEX-16NPV-2326-SM-HL9UF 50-59 years, female 4902.6
GTEX-17F9Y-2226-SM-HL9UK 70-79 years, female 4819.4
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 4777.7
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 4664.9
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 4588.5
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 4497.6
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 4459.6
GTEX-QVJO-3126-SM-COH22 60-69 years, female 4416.6
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 4362.9
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 4343.3
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 4343.1
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 4338.9
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 4304.0
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 4262.5
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 4250.6
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 4217.2
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 4181.8
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 4137.3
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 4066.0
GTEX-13X6H-1026-SM-5MR8F 50-59 years, female 3992.6
GTEX-1I1CD-2026-SM-GA91R 60-69 years, female 3972.0
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 3969.5
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 3924.4
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 3923.3
GTEX-W5X1-2026-SM-GPRX9 40-49 years, female 3920.8
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 3908.5
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 3907.7
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 3889.1
GTEX-15EOM-1526-SM-68723 20-29 years, female 3855.7
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 3842.2
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 3832.8
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 3822.8
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 3813.3
GTEX-RU72-2226-SM-46MUE 50-59 years, female 3788.1
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 3766.3
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 3758.8
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 3698.1
GTEX-1IE54-2126-SM-GA8ZX 40-49 years, female 3648.8
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 3635.2
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 3628.8
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 3613.1
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 3590.4
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 3580.3
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 3534.9
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 3531.4
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 3529.6
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 3507.5
GTEX-WI4N-2526-SM-4M9QQ 40-49 years, female 3429.5
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 3426.1
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 3421.1
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 3419.4
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 3386.9
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 3370.6
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 3366.0
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 3336.5
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 3330.3
GTEX-13SLX-2426-SM-664OM 50-59 years, female 3318.4
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 3316.7
GTEX-S32W-1226-SM-4AD67 50-59 years, female 3297.3
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 3280.5
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 3277.1
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 3272.2
GTEX-S341-0726-SM-4AD5R 40-49 years, female 3263.5
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 3258.8
GTEX-1NUQO-1726-SM-HK7A8 20-29 years, female 3257.6
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 3257.0
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 3250.0
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 3233.9
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 3217.0
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 3211.5
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 3200.6
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 3184.9
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 3170.7
GTEX-14BIN-1426-SM-664NI 50-59 years, female 3155.2
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 3143.0
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 3110.6
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 3106.0
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 3089.5
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 3086.2
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 3064.9
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 3059.9
GTEX-11I78-1926-SM-59878 50-59 years, female 3046.8
GTEX-145ME-1226-SM-5MR87 40-49 years, female 3036.1
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 3034.2
GTEX-R45C-2526-SM-GRR28 60-69 years, female 3027.7
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 3013.2
GTEX-QCQG-1426-SM-48U22 50-59 years, female 3010.1
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 3009.6
GTEX-131XW-2726-SM-HL9U9 50-59 years, female 2994.2
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 2982.0
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 2961.3
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 2961.0
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 2950.9
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 2942.3
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 2935.9
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 2932.0
GTEX-1RNTQ-1726-SM-F2I39 20-29 years, female 2931.5
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 2913.8
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 2910.3
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 2908.1
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 2897.8
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 2896.5
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 2895.0
GTEX-15SHU-2726-SM-HAV2W 40-49 years, female 2891.0
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 2889.0
GTEX-P78B-1926-SM-3P616 40-49 years, female 2875.9
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 2855.3
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 2829.1
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 2786.7
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 2762.6
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 2759.5
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 2730.1
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 2721.8
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 2717.5
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 2704.5
GTEX-14PKV-1226-SM-6871T 20-29 years, female 2699.5
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 2691.8
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 2680.8
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 2674.0
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 2673.4
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 2669.9
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 2665.9
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 2648.4
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 2642.8
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 2641.1
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 2623.2
GTEX-1399S-2126-SM-G8OM9 30-39 years, female 2588.8
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 2586.5
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 2583.6
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 2581.9
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 2563.5
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 2556.8
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 2539.3
GTEX-18D9A-0826-SM-718C1 30-39 years, female 2533.1
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 2514.6
GTEX-ZTPG-1926-SM-HAUZ1 20-29 years, female 2490.7
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 2456.7
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 2448.5
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 2359.3
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 2346.2
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 2341.6
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 2340.1
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 2310.9
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 2290.1
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 2271.7
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 2259.7
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 2204.1
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 2198.0
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 2178.2
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 2154.4
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 2125.0
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 2119.0
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 2103.8
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 2095.0
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 2077.2
GTEX-Q734-0726-SM-48TZP 40-49 years, female 2063.4
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 2063.3
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 2028.0
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 2014.9
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 1988.8
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 1983.6
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 1982.4
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 1975.3
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 1963.3
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 1925.4
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 1919.4
GTEX-1R9JW-1226-SM-F2I1P 30-39 years, female 1915.6
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 1913.4
GTEX-1MCYP-1426-SM-F2I3H 20-29 years, female 1897.5
GTEX-14JG6-0626-SM-68716 30-39 years, female 1878.4
GTEX-OHPN-1626-SM-GNTBJ 60-69 years, female 1852.7
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 1823.2
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 1804.5
GTEX-SE5C-0826-SM-HL9T7 40-49 years, female 1769.1
GTEX-R55G-1526-SM-48FER 40-49 years, female 1718.6
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 1717.8
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 1658.0
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 1657.8
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 1546.8
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 1543.6
Show allShow less

OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1203.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 1203.5
FF:10020-101D2 47,75,84 years, female 1203.5

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