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  • TISSUE

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  • KLHDC3
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:96.1 nTPM
HPA Brain:113.5 nTPM
GTEx:96.1 nTPM
Pig:91.0 nTPM
Mouse:93.9 nTPM
Allen mouse:10.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

113.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 106.7
2226 Male, age 75, left hemisphere 119.0
1961 Female, age 42, unknown 94.5
Dorsomedial nucleus
nTPM: 106.7
1989 Male, age 62, unknown 144.3
2041 Female, age 72, unknown 89.7
2017 Female, age 42, unknown 86.1
Lateral hypothalamic area
nTPM: 113.5
1791 Male, age 80, right hemisphere 127.2
2271 Male, age 75, both hemispheres 116.4
2228 Male, age 66, unknown 111.8
2412 Male, age 62, unknown 98.5
Mammillary body
nTPM: 112.0
1923 Female, age 72, unknown 154.0
2413 Male, age 66, unknown 106.7
1948 Female, age 72, unknown 104.9
1834 Female, age 42, unknown 102.0
1945 Male, age 80, right hemisphere 92.4
Paraventricular nucleus
nTPM: 75.4
2700 Male, age 62, unknown 75.4
Preoptic area
nTPM: 93.9
1907 Male, age 80, right hemisphere 109.8
1861 Female, age 42, unknown 93.6
2414 Female, age 72, unknown 78.3
Supraoptic nucleus
nTPM: 85.7
2835 Female, age 72, unknown 99.4
1894 Female, age 72, unknown 82.2
2043 Male, age 62, unknown 75.5
Ventromedial nucleus
nTPM: 97.5
1982 Female, age 72, unknown 109.1
1822 Female, age 42, unknown 86.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

96.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 96.1
Samples: 257

Max nTPM: 217.8
Min nTPM: 53.1
Std nTPM: 22.5
Median nTPM: 93.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 217.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 206.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 170.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 170.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 166.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 166.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 161.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 157.8
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 149.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 145.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 142.6
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 142.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 139.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 136.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 133.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 133.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 132.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 129.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 129.2
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 125.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 123.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 123.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 123.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 122.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 119.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 118.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 118.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 118.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 117.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 117.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 114.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 114.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 113.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 112.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 112.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 112.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 111.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 110.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 110.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 110.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 110.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 110.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 109.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 109.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 109.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 108.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 108.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 108.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 108.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 108.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 108.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 107.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 107.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 107.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 107.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 107.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 106.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 106.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 106.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 105.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 105.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 105.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 105.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 105.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 105.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 104.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 104.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 104.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 104.1
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 104.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 103.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 103.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 103.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 103.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 103.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 103.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 103.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 102.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 102.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 102.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 102.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 102.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 101.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 101.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 101.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 101.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 101.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 101.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 101.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 101.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 99.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 99.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 99.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 99.2
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 98.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 98.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 98.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 98.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 98.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 97.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 97.7
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 97.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 97.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 97.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 97.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 97.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 96.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 96.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 96.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 96.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 96.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 95.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 95.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 95.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 95.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 94.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 94.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 94.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 94.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 94.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 94.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 94.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 94.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 94.2
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 94.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 94.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 93.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 93.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 93.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 93.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 92.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 92.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 92.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 92.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 92.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 91.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 91.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 91.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 91.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 91.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 90.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 90.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 90.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 90.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 90.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 90.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 89.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 89.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 89.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 89.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 89.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 89.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 89.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 89.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 88.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 88.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 88.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 88.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 88.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 88.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 88.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 87.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 87.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 87.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 87.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 87.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 87.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 87.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 86.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 86.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 86.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 86.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 86.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 86.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 86.3
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 86.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 85.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 85.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 85.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 85.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 84.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 84.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 84.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 84.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 84.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 83.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 83.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 83.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 83.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 83.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 83.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 82.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 82.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 82.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 82.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 82.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 82.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 81.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 81.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 80.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 80.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 80.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 80.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 80.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 80.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 79.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 79.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 79.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 78.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 78.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 78.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 78.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 76.7
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 76.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 75.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 75.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 75.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 74.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 74.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 74.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 74.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 74.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 74.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 73.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 73.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 73.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 73.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 73.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 73.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 72.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 72.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 71.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 71.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 71.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 71.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 71.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 71.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 69.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 69.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 68.5
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 67.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 67.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 67.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 67.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 66.6
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 66.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 66.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 66.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 66.2
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 66.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 65.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 65.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 64.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 64.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 63.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 53.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 53.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

91.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 91.0
Samples: 4

Max nTPM: 109.1
Min nTPM: 75.9
Sample A Female 109.1
Sample B Female 96.1
Sample C Male 82.9
Sample D Male 75.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

93.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 93.9
Samples: 4

Max nTPM: 100.4
Min nTPM: 89.2
Sample A Male 90.4
Sample B Male 100.4
Sample C Female 95.4
Sample D Female 89.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 10.2
68637491 Antisense, RP_050126_01_A06, Mouse strain C57BL/6J (56 days, male) 10.2

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