We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
MEA1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • MEA1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:98.4 nTPM
HPA Brain:72.7 nTPM
GTEx:98.4 nTPM
Pig:63.5 nTPM
Mouse:138.7 nTPM
Allen mouse:4.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

72.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 61.3
2226 Male, age 75, left hemisphere 68.9
1961 Female, age 42, unknown 53.7
Dorsomedial nucleus
nTPM: 51.8
2041 Female, age 72, unknown 65.4
2017 Female, age 42, unknown 46.5
1989 Male, age 62, unknown 43.5
Lateral hypothalamic area
nTPM: 57.7
2228 Male, age 66, unknown 68.3
1791 Male, age 80, right hemisphere 61.8
2412 Male, age 62, unknown 51.4
2271 Male, age 75, both hemispheres 49.2
Mammillary body
nTPM: 45.5
2413 Male, age 66, unknown 51.0
1945 Male, age 80, right hemisphere 50.3
1948 Female, age 72, unknown 46.3
1923 Female, age 72, unknown 41.3
1834 Female, age 42, unknown 38.5
Paraventricular nucleus
nTPM: 72.7
2700 Male, age 62, unknown 72.7
Preoptic area
nTPM: 54.6
1861 Female, age 42, unknown 57.6
1907 Male, age 80, right hemisphere 55.8
2414 Female, age 72, unknown 50.4
Supraoptic nucleus
nTPM: 57.0
2835 Female, age 72, unknown 63.7
2043 Male, age 62, unknown 54.2
1894 Female, age 72, unknown 53.0
Ventromedial nucleus
nTPM: 56.1
1822 Female, age 42, unknown 56.7
1982 Female, age 72, unknown 55.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

98.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 98.4
Samples: 257

Max nTPM: 170.5
Min nTPM: 52.1
Std nTPM: 20.5
Median nTPM: 96.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 170.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 167.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 162.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 161.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 153.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 149.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 140.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 139.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 139.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 136.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 135.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 133.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 132.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 131.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 131.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 131.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 130.8
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 130.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 130.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 130.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 128.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 128.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 128.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 127.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 127.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 126.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 126.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 125.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 125.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 125.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 124.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 123.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 123.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 123.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 123.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 123.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 122.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 121.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 120.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 119.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 118.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 118.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 117.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 117.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 116.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 116.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 116.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 115.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 114.0
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 114.0
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 113.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 113.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 113.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 112.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 112.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 112.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 112.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 112.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 111.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 111.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 110.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 110.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 110.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 110.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 109.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 109.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 109.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 109.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 109.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 109.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 109.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 108.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 107.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 107.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 107.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 106.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 106.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 106.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 106.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 106.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 105.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 105.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 105.5
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 105.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 105.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 104.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 104.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 104.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 104.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 104.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 103.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 103.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 103.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 102.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 102.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 102.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 102.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 101.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 101.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 101.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 101.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 101.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 101.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 101.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 101.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 100.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 100.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 100.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 99.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 99.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 99.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 99.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 98.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 98.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 98.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 98.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 98.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 98.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 97.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 97.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 97.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 97.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 97.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 97.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 97.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 97.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 96.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 96.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 96.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 96.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 96.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 95.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 95.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 95.3
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 95.3
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 95.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 95.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 94.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 94.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 94.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 94.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 94.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 94.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 94.0
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 93.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 93.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 93.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 93.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 93.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 92.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 92.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 92.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 92.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 91.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 91.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 91.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 91.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 91.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 91.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 90.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 90.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 89.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 89.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 89.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 89.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 89.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 89.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 88.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 88.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 88.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 88.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 88.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 88.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 88.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 88.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 87.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 87.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 87.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 87.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 86.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 86.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 86.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 86.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 86.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 86.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 85.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 85.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 85.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 85.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 85.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 85.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 84.6
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 84.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 84.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 83.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 83.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 83.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 83.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 83.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 82.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 82.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 82.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 82.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 82.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 82.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 81.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 81.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 81.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 81.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 80.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 80.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 80.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 80.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 80.4
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 79.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 79.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 79.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 79.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 79.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 79.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 78.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 78.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 77.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 77.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 76.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 76.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 75.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 75.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 75.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 75.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 75.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 74.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 74.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 74.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 72.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 72.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 72.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 70.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 70.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 70.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 69.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 69.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 69.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 68.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 68.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 67.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 67.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 64.6
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 63.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 63.2
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 63.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 62.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 62.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 61.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 53.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 53.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 52.1
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

63.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 63.5
Samples: 4

Max nTPM: 77.9
Min nTPM: 52.1
Sample A Female 77.9
Sample B Female 61.8
Sample C Male 62.2
Sample D Male 52.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

138.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 138.7
Samples: 4

Max nTPM: 141.8
Min nTPM: 135.2
Sample A Male 135.2
Sample B Male 141.8
Sample C Female 139.4
Sample D Female 138.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 4.2
70429297 Antisense, RP_050614_01_D07, Mouse strain C57BL/6J (56 days, male) 4.2

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo