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TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
Tissue methods
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Ovarian stroma cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:537.1 nTPM
HPA:537.1 nTPM
GTEx:468.0 nTPM
FANTOM5:71.4 Scaled Tags Per Million
OVARY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA041437
Ovarian stroma cells Medium



OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

537.1
overview
Female, age 64
Ovary sample 192
nTPM: 306.6
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 500
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 425
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 376.9
N/A
Female, age 16
Ovary sample 3663
nTPM: 1361.6
N/A
Female, age 20
Ovary sample 3664
nTPM: 459.3
N/A
Female, age 32
Ovary sample 3665
nTPM: 330.4

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

468.0
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 468.0
Samples: 193

Max nTPM: 994.7
Min nTPM: 200.9
Std nTPM: 142.9
Median nTPM: 442.3
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 994.7
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 961.8
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 931.7
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 881.0
GTEX-13NZ8-2526-SM-H65ZM 60-69 years, female 879.1
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 841.2
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 839.7
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 799.1
GTEX-ZE7O-2226-SM-GNTC2 50-59 years, female 791.8
GTEX-17F9Y-2226-SM-HL9UK 70-79 years, female 786.2
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 770.4
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 753.5
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 745.9
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 713.3
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 696.4
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 688.6
GTEX-183WM-1926-SM-72D5F 70-79 years, female 686.4
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 679.4
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 624.8
GTEX-16NPV-2326-SM-HL9UF 50-59 years, female 624.1
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 621.6
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 617.1
GTEX-15EOM-1526-SM-68723 20-29 years, female 614.6
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 612.3
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 606.5
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 605.6
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 605.1
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 601.3
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 600.0
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 597.0
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 595.6
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 593.5
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 592.8
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 588.6
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 585.5
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 576.9
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 571.1
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 562.6
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 561.5
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 558.7
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 557.0
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 553.6
GTEX-13X6H-1026-SM-5MR8F 50-59 years, female 553.1
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 551.7
GTEX-QVJO-3126-SM-COH22 60-69 years, female 546.6
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 545.6
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 539.9
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 539.5
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 537.1
GTEX-RU72-2226-SM-46MUE 50-59 years, female 526.6
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 526.4
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 525.3
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 517.6
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 517.2
GTEX-1IE54-2126-SM-GA8ZX 40-49 years, female 510.1
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 508.9
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 507.5
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 505.5
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 505.0
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 503.2
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 503.0
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 501.2
GTEX-1I1CD-2026-SM-GA91R 60-69 years, female 494.8
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 494.7
GTEX-W5X1-2026-SM-GPRX9 40-49 years, female 494.7
GTEX-14BIN-1426-SM-664NI 50-59 years, female 492.3
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 492.3
GTEX-13SLX-2426-SM-664OM 50-59 years, female 491.8
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 488.7
GTEX-S32W-1226-SM-4AD67 50-59 years, female 483.7
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 476.5
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 471.1
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 469.7
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 468.1
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 467.9
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 464.5
GTEX-1NUQO-1726-SM-HK7A8 20-29 years, female 464.4
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 464.4
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 463.3
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 460.6
GTEX-R45C-2526-SM-GRR28 60-69 years, female 459.7
GTEX-P78B-1926-SM-3P616 40-49 years, female 459.0
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 458.6
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 457.9
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 457.5
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 453.3
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 452.9
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 452.8
GTEX-ZTPG-1926-SM-HAUZ1 20-29 years, female 452.5
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 451.8
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 450.6
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 450.0
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 448.6
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 445.3
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 445.2
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 444.6
GTEX-15SHU-2726-SM-HAV2W 40-49 years, female 442.3
GTEX-11I78-1926-SM-59878 50-59 years, female 441.6
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 439.7
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 438.4
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 436.8
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 436.6
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 432.4
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 429.4
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 429.1
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 429.1
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 427.2
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 425.5
GTEX-S341-0726-SM-4AD5R 40-49 years, female 424.6
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 422.3
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 419.5
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 416.7
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 414.7
GTEX-QCQG-1426-SM-48U22 50-59 years, female 413.8
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 413.4
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 410.9
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 410.7
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 410.2
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 409.7
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 409.7
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 406.4
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 405.8
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 404.7
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 404.7
GTEX-WI4N-2526-SM-4M9QQ 40-49 years, female 402.7
GTEX-145ME-1226-SM-5MR87 40-49 years, female 400.0
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 398.5
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 398.0
GTEX-131XW-2726-SM-HL9U9 50-59 years, female 397.1
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 397.1
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 395.1
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 390.2
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 387.8
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 386.7
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 384.9
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 383.7
GTEX-1399S-2126-SM-G8OM9 30-39 years, female 382.9
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 382.2
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 380.9
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 377.2
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 376.6
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 375.8
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 375.4
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 369.5
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 367.0
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 365.6
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 364.5
GTEX-14JG6-0626-SM-68716 30-39 years, female 364.3
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 362.3
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 361.9
GTEX-1RNTQ-1726-SM-F2I39 20-29 years, female 359.3
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 355.7
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 353.1
GTEX-Q734-0726-SM-48TZP 40-49 years, female 352.9
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 352.1
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 350.8
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 349.9
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 349.8
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 349.8
GTEX-1MCYP-1426-SM-F2I3H 20-29 years, female 349.3
GTEX-14PKV-1226-SM-6871T 20-29 years, female 349.1
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 347.5
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 346.9
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 343.1
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 340.9
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 340.3
GTEX-18D9A-0826-SM-718C1 30-39 years, female 333.7
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 327.7
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 327.1
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 321.1
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 320.6
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 319.5
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 318.3
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 318.2
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 317.7
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 316.9
GTEX-SE5C-0826-SM-HL9T7 40-49 years, female 315.8
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 309.8
GTEX-R55G-1526-SM-48FER 40-49 years, female 308.0
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 306.1
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 305.6
GTEX-1R9JW-1226-SM-F2I1P 30-39 years, female 303.2
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 302.0
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 288.5
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 285.1
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 282.7
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 277.9
GTEX-OHPN-1626-SM-GNTBJ 60-69 years, female 275.2
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 273.4
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 272.2
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 265.6
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 215.6
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 200.9
Show allShow less

OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

71.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 71.4
FF:10020-101D2 47,75,84 years, female 71.4

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