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  • TISSUE

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  • PSMF1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:31.2 nTPM
HPA Brain:50.0 nTPM
GTEx:31.2 nTPM
Pig:69.7 nTPM
Mouse:30.5 nTPM
Allen mouse:1.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

50.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 39.7
2226 Male, age 75, left hemisphere 43.3
1961 Female, age 42, unknown 36.1
Dorsomedial nucleus
nTPM: 39.7
1989 Male, age 62, unknown 49.0
2041 Female, age 72, unknown 36.2
2017 Female, age 42, unknown 33.8
Lateral hypothalamic area
nTPM: 42.8
2271 Male, age 75, both hemispheres 48.1
2228 Male, age 66, unknown 45.9
1791 Male, age 80, right hemisphere 38.7
2412 Male, age 62, unknown 38.7
Mammillary body
nTPM: 45.4
1945 Male, age 80, right hemisphere 48.8
2413 Male, age 66, unknown 47.2
1948 Female, age 72, unknown 46.1
1834 Female, age 42, unknown 45.5
1923 Female, age 72, unknown 39.4
Paraventricular nucleus
nTPM: 48.6
2700 Male, age 62, unknown 48.6
Preoptic area
nTPM: 41.8
1861 Female, age 42, unknown 45.3
2414 Female, age 72, unknown 45.1
1907 Male, age 80, right hemisphere 35.0
Supraoptic nucleus
nTPM: 50.0
2835 Female, age 72, unknown 56.9
2043 Male, age 62, unknown 51.8
1894 Female, age 72, unknown 41.3
Ventromedial nucleus
nTPM: 35.4
1982 Female, age 72, unknown 37.1
1822 Female, age 42, unknown 33.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

31.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 31.2
Samples: 257

Max nTPM: 51.8
Min nTPM: 20.2
Std nTPM: 4.9
Median nTPM: 30.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 51.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 50.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 47.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 45.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 44.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 44.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 43.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 41.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 41.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 40.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 40.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 40.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 39.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 39.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 39.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 39.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 39.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 39.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 39.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 38.7
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 38.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 38.0
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 37.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 37.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 37.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 37.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 37.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 37.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 37.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 37.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 37.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 36.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 36.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 36.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 36.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 36.5
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 36.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 36.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 36.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 36.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 36.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 35.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 35.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 35.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 35.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 35.5
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 35.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 35.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 35.1
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 35.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 35.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 35.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 35.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 35.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 35.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 34.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 34.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 34.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 34.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 34.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 34.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 34.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 34.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 34.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 34.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 34.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 34.2
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 34.1
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 34.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 34.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 33.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 33.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 33.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 33.6
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 33.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 33.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 33.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 33.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 33.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 33.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 33.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 32.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 32.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 32.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 32.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 32.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 32.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 32.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 32.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 32.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 32.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 32.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 32.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 32.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 32.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 32.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 32.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 32.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 32.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 32.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 32.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 31.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 31.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 31.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 31.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 31.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 31.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 31.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 31.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 31.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 31.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 31.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 31.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 31.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 31.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 31.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 31.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 30.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 30.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 30.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 30.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 30.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 30.4
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 30.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 30.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 30.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 30.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 30.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 30.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 30.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 30.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 29.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 29.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 29.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 29.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 29.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 29.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 29.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 29.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 29.6
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 29.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 29.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 29.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 29.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 29.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 29.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 29.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 29.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 29.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 29.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 29.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 29.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 29.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 29.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 29.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 28.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 28.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 28.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 28.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 28.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 28.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 28.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 28.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 28.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 28.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 28.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 28.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 28.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 28.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 28.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 28.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 28.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 28.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 28.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 28.4
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 28.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 28.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 28.4
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 28.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 28.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 28.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 28.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 28.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 28.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 28.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 28.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 28.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 28.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 27.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 27.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 27.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 27.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 27.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 27.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 27.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 27.7
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 27.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 27.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 27.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 27.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 27.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 27.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 27.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 27.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 27.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 27.2
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 27.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 27.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 27.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 27.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 27.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 27.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 26.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 26.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 26.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 26.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 26.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 26.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 26.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 26.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 26.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 26.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 26.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 26.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 26.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 26.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 26.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 25.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 25.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 25.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 25.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 25.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 25.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 25.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 25.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 25.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 25.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 25.4
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 25.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 25.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 25.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 24.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 24.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 24.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 24.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 24.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 24.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 24.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 24.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 24.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 23.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 23.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 22.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 22.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 21.9
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 21.7
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 20.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

69.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 69.7
Samples: 4

Max nTPM: 84.1
Min nTPM: 56.1
Sample A Female 84.1
Sample B Female 68.0
Sample C Male 70.6
Sample D Male 56.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

30.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 30.5
Samples: 4

Max nTPM: 31.5
Min nTPM: 29.4
Sample A Male 31.3
Sample B Male 31.5
Sample C Female 29.9
Sample D Female 29.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.9
532650 Antisense, RP_040825_01_A06, Mouse strain C57BL/6J (56 days, male) 2.7
77910645 Antisense, RP_070208_04_E05, Mouse strain C57BL/6J (56 days, male) 1.2

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