HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:164.4 nTPM
HPA Brain:125.0 nTPM
GTEx:164.4 nTPM
FANTOM5:446.4 Scaled Tags Per Million
Pig:178.0 nTPM
Mouse:294.4 nTPM
Allen mouse:10.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody CAB037094
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 125.0
Sample id Sample description nTPM
Hippocampus
nTPM: 100.0
1898 Male, age 80, left hemisphere 161.4
1855 Male, age 76, left hemisphere 115.3
2621 Female, age 67, right hemisphere 86.1
2529 Female, age 94, left hemisphere 85.5
1911 Female, age 85, right hemisphere 81.3
2148 Female, age 91, left hemisphere 70.2
Dentate gyrus
nTPM: 106.8
2010 Male, age 76, both hemispheres 143.0
1927 Female, age 91, both hemispheres 138.2
2530 Female, age 94, left hemisphere 99.6
2246 Female, age 85, both hemispheres 91.6
2528 Male, age 74, both hemispheres 90.3
2531 Female, age 67, both hemispheres 78.3
Entorhinal gyrus
nTPM: 74.7
1938 Female, age 85, left hemisphere 96.5
1787 Male, age 76, left hemisphere 85.7
2764 Male, age 80, right hemisphere 83.5
2117 Female, age 91, right hemisphere 65.7
2686 Male, age 75, right hemisphere 62.0
2613 Female, age 94, left hemisphere 54.7
Hippocampus, CA1
nTPM: 125.0
2749 Male, age 80, left hemisphere 199.3
1873 Female, age 85, both hemispheres 143.7
2045 Male, age 76, both hemispheres 130.2
2527 Male, age 74, both hemispheres 80.1
2082 Female, age 91, right hemisphere 71.6
Hippocampus, CA2
nTPM: 109.8
1892 Male, age 76, both hemispheres 166.3
1963 Male, age 80, left hemisphere 158.5
2249 Male, age 74, both hemispheres 95.8
1940 Female, age 85, left hemisphere 87.1
2437 Female, age 94, left hemisphere 82.1
2113 Female, age 91, right hemisphere 69.0
Hippocampus, CA3
nTPM: 96.2
2137 Male, age 80, left hemisphere 134.3
1867 Male, age 76, both hemispheres 129.7
1891 Female, age 85, both hemispheres 91.4
2436 Male, age 74, both hemispheres 82.5
2620 Female, age 94, left hemisphere 71.5
2861 Female, age 67, both hemispheres 68.0
Parahippocampal cortex
nTPM: 87.3
1850 Male, age 80, both hemispheres 134.4
1933 Female, age 85, both hemispheres 101.1
2018 Male, age 76, both hemispheres 98.3
1990 Female, age 91, right hemisphere 94.7
2250 Female, age 67, right hemisphere 93.8
2245 Female, age 91, both hemispheres 90.9
2693 Female, age 94, both hemispheres 88.4
2532 Female, age 72, left hemisphere 66.9
2692 Male, age 74, both hemispheres 55.4
2622 Female, age 67, right hemisphere 49.2
Perirhinal gyrus
nTPM: 121.3
1841 Female, age 85, right hemisphere 136.3
1794 Male, age 80, right hemisphere 135.9
1847 Female, age 91, left hemisphere 127.3
2848 Male, age 76, right hemisphere 106.5
2521 Female, age 94, right hemisphere 100.8
Subiculum
nTPM: 79.2
1901 Male, age 80, both hemispheres 98.5
1977 Female, age 85, both hemispheres 95.4
2042 Male, age 76, both hemispheres 85.9
2729 Female, age 91, right hemisphere 70.4
2438 Female, age 94, left hemisphere 67.3
2619 Male, age 74, both hemispheres 57.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 164.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 164.4
Samples: 255

Max nTPM: 469.9
Min nTPM: 82.6
Std nTPM: 53.1
Median nTPM: 154.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 469.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 339.0
GTEX-11DYG-0011-R1a-SM-GI4X6 60-69 years, male 335.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 316.9
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 278.7
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 276.3
GTEX-1JMQJ-0011-R1b-SM-F2T9P 50-59 years, male 269.7
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 265.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 262.5
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 261.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 257.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 446.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 446.4
FF:10169-103B7 60 years, female 626.2
FF:10153-102I9 76 years, female 266.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 178.0
Pig sample Sample description nTPM
Subiculum
nTPM: 140.2
Samples: 4

Max nTPM: 170.3
Min nTPM: 126.4
Sample A Female 170.3
Sample B Female 126.4
Sample C Male 128.2
Sample D Male 135.8
Dorsal hippocampus
nTPM: 178.0
Samples: 4

Max nTPM: 224.4
Min nTPM: 144.6
Sample A Female 224.4
Sample B Female 181.4
Sample C Male 144.6
Sample D Male 161.4
Entorhinal cortex
nTPM: 141.5
Samples: 4

Max nTPM: 157.9
Min nTPM: 111.2
Sample A Female 139.2
Sample B Female 157.7
Sample C Male 157.9
Sample D Male 111.2
Ventral hippocampus
nTPM: 152.6
Samples: 4

Max nTPM: 203.2
Min nTPM: 116.6
Sample A Female 143.9
Sample B Female 116.6
Sample C Male 146.8
Sample D Male 203.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 294.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 238.7
Samples: 4

Max nTPM: 261.5
Min nTPM: 225.2
Sample A Male 225.2
Sample B Male 239.4
Sample C Female 261.5
Sample D Female 228.8
Hippocampal formation
nTPM: 294.4
Samples: 4

Max nTPM: 315.8
Min nTPM: 271.5
Sample A Male 315.8
Sample B Male 271.5
Sample C Female 298.1
Sample D Female 292.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 10.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.8
74658076 Antisense, RP_060220_04_D01, Mouse strain C57BL/6J (56 days, male) 12.6
69671630 Antisense, RP_050428_01_H10, Mouse strain C57BL/6J (56 days, male) 9.1

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