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CITED1
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  • TISSUE

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TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:70.8 nTPM
HPA Brain:117.0 nTPM
GTEx:70.8 nTPM
Pig:34.3 nTPM
Mouse:35.1 nTPM
Allen mouse:1.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

117.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 117.0
2226 Male, age 75, left hemisphere 176.2
1961 Female, age 42, unknown 57.9
Dorsomedial nucleus
nTPM: 18.0
2041 Female, age 72, unknown 23.7
2017 Female, age 42, unknown 20.9
1989 Male, age 62, unknown 9.5
Lateral hypothalamic area
nTPM: 67.9
1791 Male, age 80, right hemisphere 92.4
2412 Male, age 62, unknown 89.5
2228 Male, age 66, unknown 63.7
2271 Male, age 75, both hemispheres 25.9
Mammillary body
nTPM: 16.4
1923 Female, age 72, unknown 30.2
1834 Female, age 42, unknown 19.7
2413 Male, age 66, unknown 14.9
1948 Female, age 72, unknown 13.9
1945 Male, age 80, right hemisphere 3.6
Paraventricular nucleus
nTPM: 40.2
2700 Male, age 62, unknown 40.2
Preoptic area
nTPM: 32.7
1907 Male, age 80, right hemisphere 64.9
1861 Female, age 42, unknown 18.9
2414 Female, age 72, unknown 14.5
Supraoptic nucleus
nTPM: 78.1
2835 Female, age 72, unknown 123.9
2043 Male, age 62, unknown 64.0
1894 Female, age 72, unknown 46.6
Ventromedial nucleus
nTPM: 53.9
1822 Female, age 42, unknown 57.9
1982 Female, age 72, unknown 50.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

70.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 70.8
Samples: 257

Max nTPM: 379.9
Min nTPM: 1.8
Std nTPM: 64.3
Median nTPM: 51.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 379.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 378.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 307.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 303.3
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 289.1
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 245.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 216.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 214.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 208.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 207.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 207.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 207.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 202.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 193.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 193.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 191.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 189.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 188.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 187.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 186.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 170.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 169.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 155.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 151.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 150.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 148.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 147.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 147.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 139.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 138.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 138.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 137.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 137.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 136.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 135.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 133.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 133.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 132.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 132.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 132.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 130.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 129.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 129.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 129.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 125.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 123.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 121.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 120.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 115.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 114.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 113.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 112.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 110.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 109.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 106.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 104.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 104.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 102.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 100.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 99.7
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 99.4
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 97.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 97.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 96.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 96.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 96.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 94.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 93.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 92.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 92.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 91.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 91.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 91.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 91.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 90.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 89.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 87.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 86.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 86.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 85.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 85.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 84.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 82.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 82.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 79.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 77.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 77.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 77.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 76.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 76.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 76.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 72.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 71.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 69.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 69.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 69.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 68.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 66.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 66.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 66.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 66.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 65.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 64.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 64.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 62.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 62.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 62.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 61.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 61.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 60.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 60.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 59.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 59.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 58.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 58.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 57.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 57.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 56.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 56.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 55.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 55.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 54.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 54.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 54.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 53.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 53.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 52.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 52.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 51.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 50.9
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 50.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 50.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 49.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 49.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 49.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 49.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 48.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 48.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 48.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 48.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 48.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 47.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 47.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 46.5
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 45.6
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 45.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 44.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 43.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 42.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 42.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 40.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 40.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 40.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 39.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 39.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 39.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 38.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 38.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 38.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 38.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 38.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 37.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 37.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 37.4
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 35.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 35.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 35.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 34.7
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 34.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 34.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 33.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 33.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 33.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 33.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 33.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 32.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 32.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 31.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 30.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 30.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 30.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 29.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 29.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 29.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 29.4
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 28.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 28.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 27.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 26.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 26.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 26.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 25.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 24.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 24.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 24.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 23.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 23.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 23.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 23.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 23.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 23.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 22.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 20.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 20.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 20.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 20.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 20.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 20.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 19.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 19.0
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 18.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 18.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 18.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 16.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 16.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 15.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 15.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 15.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 14.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 14.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 13.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 12.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 12.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 12.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 12.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 12.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 11.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 11.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 11.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 10.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 10.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 10.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 10.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 9.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 9.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 9.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 8.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 8.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 8.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 8.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 7.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 7.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 7.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 7.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 7.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 6.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 6.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 6.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 6.0
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 5.7
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 4.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 4.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 4.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 4.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 3.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 2.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 1.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

34.3
Pig sample Sample description nTPM
Hypothalamus
nTPM: 34.3
Samples: 4

Max nTPM: 53.5
Min nTPM: 16.5
Sample A Female 25.5
Sample B Female 16.5
Sample C Male 41.8
Sample D Male 53.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

35.1
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 35.1
Samples: 4

Max nTPM: 39.0
Min nTPM: 30.1
Sample A Male 36.2
Sample B Male 39.0
Sample C Female 35.0
Sample D Female 30.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.1
74641326 Antisense, RP_060220_02_F03, Mouse strain C57BL/6J (56 days, male) 1.3
68798932 Antisense, RP_050217_01_F03, Mouse strain C57BL/6J (56 days, male) 1.0

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