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  • TISSUE

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  • NECAB3
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:17.9 nTPM
HPA Brain:36.5 nTPM
GTEx:17.9 nTPM
Pig:8.8 nTPM
Mouse:15.6 nTPM
Allen mouse:0.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

36.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 19.1
2226 Male, age 75, left hemisphere 22.2
1961 Female, age 42, unknown 16.1
Dorsomedial nucleus
nTPM: 22.4
1989 Male, age 62, unknown 30.8
2017 Female, age 42, unknown 19.2
2041 Female, age 72, unknown 17.3
Lateral hypothalamic area
nTPM: 27.7
2228 Male, age 66, unknown 34.3
1791 Male, age 80, right hemisphere 29.1
2271 Male, age 75, both hemispheres 24.0
2412 Male, age 62, unknown 23.4
Mammillary body
nTPM: 36.5
1923 Female, age 72, unknown 58.2
2413 Male, age 66, unknown 34.9
1948 Female, age 72, unknown 33.7
1834 Female, age 42, unknown 31.9
1945 Male, age 80, right hemisphere 23.9
Paraventricular nucleus
nTPM: 15.1
2700 Male, age 62, unknown 15.1
Preoptic area
nTPM: 22.3
1907 Male, age 80, right hemisphere 26.0
1861 Female, age 42, unknown 23.9
2414 Female, age 72, unknown 17.1
Supraoptic nucleus
nTPM: 18.6
2835 Female, age 72, unknown 23.5
1894 Female, age 72, unknown 16.9
2043 Male, age 62, unknown 15.6
Ventromedial nucleus
nTPM: 17.7
1982 Female, age 72, unknown 20.5
1822 Female, age 42, unknown 15.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

17.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 17.9
Samples: 257

Max nTPM: 59.8
Min nTPM: 7.1
Std nTPM: 5.9
Median nTPM: 16.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 59.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 48.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 40.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 34.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 34.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 33.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 32.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 32.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 31.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 29.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 28.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 27.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 26.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 26.8
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 26.1
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 25.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 25.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 25.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 25.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 24.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 24.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 24.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 24.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 24.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 23.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 23.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 23.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 23.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 23.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 23.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 23.2
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 22.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 22.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 22.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 22.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 22.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 22.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 22.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 22.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 22.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 22.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 22.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 22.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 21.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 21.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 21.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 21.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 21.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 21.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 21.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 21.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 20.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 20.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 20.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 20.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 20.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 20.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 20.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 20.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 20.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 20.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 20.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 20.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 20.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 20.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 20.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 20.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 20.0
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 20.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 20.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 19.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 19.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 19.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 19.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 19.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 19.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 19.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 19.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 19.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 19.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 19.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 19.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 19.5
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 19.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 19.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 19.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 19.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 19.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 19.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 19.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 19.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 19.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 18.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 18.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 18.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 18.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 18.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 18.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 18.7
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 18.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 18.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 18.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 18.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 18.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 18.6
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 18.3
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 18.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 18.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 18.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 18.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 18.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 18.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 17.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 17.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 17.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 17.8
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 17.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 17.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 17.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 17.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 17.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 17.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 17.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 17.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 17.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 17.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 17.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 17.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 16.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 16.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 16.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 16.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 16.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 16.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 16.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 16.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 16.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 16.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 16.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 16.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 16.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 16.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 16.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 16.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 16.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 16.2
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 16.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 16.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 16.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 16.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 15.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 15.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 15.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 15.8
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 15.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 15.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 15.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 15.7
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 15.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 15.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 15.6
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 15.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 15.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 15.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 15.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 15.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 15.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 15.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 15.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 15.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 15.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 15.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 15.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 15.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 15.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 15.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 15.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 15.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 14.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 14.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 14.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 14.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 14.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 14.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 14.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 14.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 14.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 14.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 14.4
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 14.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 14.3
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 14.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 14.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 14.2
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 14.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 14.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 14.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 14.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 14.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 14.0
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 14.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 14.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 14.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 14.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 13.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 13.8
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 13.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 13.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 13.7
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 13.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 13.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 13.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 13.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 13.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 13.3
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 13.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 13.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 13.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 13.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 13.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 12.9
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 12.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 12.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 12.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 12.6
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 12.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 12.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 12.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 12.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 12.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 12.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 12.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 12.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 12.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 11.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 11.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 11.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 11.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 11.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 11.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 11.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 11.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 11.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 11.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 11.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 10.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 10.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 9.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 9.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 9.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 9.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 9.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 9.5
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 9.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 8.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 8.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 7.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

8.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 8.8
Samples: 4

Max nTPM: 9.3
Min nTPM: 8.3
Sample A Female 9.3
Sample B Female 8.3
Sample C Male 9.2
Sample D Male 8.4

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

15.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 15.7
Samples: 4

Max nTPM: 16.6
Min nTPM: 15.2
Sample A Male 15.6
Sample B Male 16.6
Sample C Female 15.2
Sample D Female 15.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.5
73771236 Sense, RPS_051213_02_B08, Mouse strain C57BL/6J (56 days, male) 0.8
73771235 Antisense, RP_051213_01_B08, Mouse strain C57BL/6J (56 days, male) 0.6
70230975 Antisense, RP_050524_04_H07, Mouse strain C57BL/6J (56 days, male) 0.2

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