PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:190.2 nTPM
FANTOM5:166.3 Scaled Tags Per Million
Pig:23.5 nTPM
Mouse:47.2 nTPM
Allen mouse:0.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

PONS AND MEDULLA - Annotated protein expression
Pending normal tissue analysis

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 190.2
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 185.1
1984 Male, age 76, both hemispheres 205.3
2090 Male, age 80, both hemispheres 193.8
2188 Female, age 91, both hemispheres 178.9
2301 Female, age 85, both hemispheres 162.4
Area postrema
nTPM: 107.4
2306 Male, age 80, both hemispheres 120.8
2054 Male, age 76, both hemispheres 106.2
2799 Male, age 61, both hemispheres 95.0
Dorsal cochlear nucleus
nTPM: 162.0
2378 Male, age 80, both hemispheres 176.2
2802 Male, age 74, right hemisphere 171.4
2370 Male, age 61, both hemispheres 168.7
2187 Female, age 91, both hemispheres 151.5
2058 Male, age 76, both hemispheres 142.4
Dorsal medullary reticular nucleus
nTPM: 154.3
2088 Male, age 76, both hemispheres 174.6
2373 Male, age 61, both hemispheres 164.5
2040 Female, age 85, both hemispheres 123.9
Dorsal motor vagal complex
nTPM: 126.9
2807 Female, age 85, both hemispheres 176.7
2797 Male, age 61, both hemispheres 167.1
2844 Male, age 55, unknown 120.6
2133 Female, age 91, both hemispheres 120.4
2643 Male, age 74, both hemispheres 116.9
2000 Male, age 74, unknown 112.8
2185 Male, age 76, both hemispheres 101.0
2813 Female, age 72, unknown 99.4
Dorsal tegmental nucleus
nTPM: 155.2
2358 Male, age 61, both hemispheres 179.5
2083 Male, age 80, both hemispheres 161.1
2326 Male, age 74, both hemispheres 150.0
1936 Male, age 76, left hemisphere 130.3
Dorsolateral tegmental area
nTPM: 146.5
2337 Male, age 61, both hemispheres 187.6
2654 Male, age 80, both hemispheres 154.2
2141 Male, age 76, both hemispheres 141.4
2751 Female, age 85, both hemispheres 131.4
2360 Male, age 74, both hemispheres 117.8
Gigantocellular reticular nuclei, medullary
nTPM: 156.0
2310 Male, age 80, both hemispheres 193.3
2462 Male, age 74, both hemispheres 170.8
2387 Female, age 91, both hemispheres 165.4
2022 Male, age 76, right hemisphere 156.7
1876 Female, age 85, both hemispheres 131.7
2314 Male, age 61, both hemispheres 117.9
Gigantocellular reticular nuclei, pars
nTPM: 177.9
2330 Male, age 80, both hemispheres 209.0
2706 Male, age 80, both hemispheres 201.2
2336 Male, age 61, both hemispheres 164.0
2084 Female, age 85, both hemispheres 158.5
2168 Male, age 76, both hemispheres 156.8
Inferior olive
nTPM: 121.2
2379 Male, age 80, both hemispheres 140.9
2628 Female, age 91, both hemispheres 137.1
2178 Male, age 61, both hemispheres 119.5
2085 Female, age 85, both hemispheres 107.1
2563 Male, age 74, both hemispheres 101.3
Kolliker-Fuse nucleus
nTPM: 151.3
2793 Female, age 91, left hemisphere 200.2
2163 Male, age 80, both hemispheres 158.3
2315 Male, age 76, right hemisphere 95.3
Lateral lemniscal nuclei
nTPM: 177.9
2320 Female, age 91, left hemisphere 226.0
2453 Male, age 74, right hemisphere 196.2
2036 Male, age 80, both hemispheres 168.7
2169 Male, age 76, both hemispheres 150.2
2746 Female, age 85, left hemisphere 148.3
Lateral medullary reticular nucleus
nTPM: 130.9
2852 Male, age 80, both hemispheres 161.5
2044 Male, age 76, both hemispheres 136.8
2374 Male, age 61, both hemispheres 131.6
2190 Female, age 85, both hemispheres 124.2
2305 Male, age 74, both hemispheres 117.9
2804 Female, age 91, both hemispheres 113.6
Lateral parabrachial nucleus
nTPM: 158.3
2790 Male, age 61, both hemispheres 197.0
2013 Male, age 80, both hemispheres 154.2
2792 Male, age 76, both hemispheres 143.6
2139 Female, age 85, right hemisphere 138.2
Lateral vestibular nucleus
nTPM: 167.0
2184 Male, age 76, both hemispheres 180.2
2311 Male, age 80, both hemispheres 153.7
Locus coeruleus
nTPM: 126.4
2162 Male, age 80, both hemispheres 153.8
2720 Male, age 74, both hemispheres 147.2
2317 Female, age 72, unknown 132.3
2014 Male, age 55, unknown 119.3
2123 Female, age 91, both hemispheres 118.1
1980 Male, age 76, both hemispheres 112.0
2788 Male, age 74, unknown 101.9
Medial olivary nucleus
nTPM: 127.0
2851 Male, age 80, both hemispheres 156.5
1962 Male, age 76, both hemispheres 128.4
1943 Male, age 61, both hemispheres 126.9
2138 Female, age 91, both hemispheres 96.2
Medial parabrachial nucleus
nTPM: 176.1
2463 Female, age 85, right hemisphere 215.1
2156 Male, age 61, both hemispheres 203.3
2786 Male, age 76, both hemispheres 161.7
2854 Male, age 80, both hemispheres 155.4
2170 Female, age 91, both hemispheres 144.8
Medial periolivary nuclei
nTPM: 175.2
2458 Female, age 91, both hemispheres 233.6
2081 Male, age 80, both hemispheres 210.9
2171 Female, age 85, both hemispheres 169.0
2791 Male, age 74, right hemisphere 142.1
2063 Male, age 76, both hemispheres 120.5
Medial vestibular nucleus
nTPM: 140.9
2093 Male, age 80, both hemispheres 165.8
2624 Male, age 61, both hemispheres 152.2
2801 Male, age 74, both hemispheres 136.5
2803 Female, age 91, both hemispheres 133.4
2743 Female, age 85, both hemispheres 131.1
2134 Male, age 76, both hemispheres 126.2
Motor facial nucleus
nTPM: 166.5
2327 Male, age 80, both hemispheres 204.1
2697 Female, age 85, both hemispheres 181.9
2795 Female, age 91, both hemispheres 168.5
2126 Male, age 61, both hemispheres 163.0
2365 Male, age 74, right hemisphere 162.1
2062 Male, age 76, both hemispheres 119.7
Motor hypoglossal nucleus
nTPM: 139.6
2182 Male, age 80, both hemispheres 185.9
2132 Female, age 85, both hemispheres 144.7
2125 Female, age 91, both hemispheres 140.0
2461 Male, age 61, both hemispheres 120.4
2277 Male, age 76, both hemispheres 107.2
Motor trigeminal nucleus
nTPM: 190.2
2335 Male, age 61, both hemispheres 210.7
2321 Female, age 91, both hemispheres 197.5
2079 Male, age 80, both hemispheres 187.9
2560 Male, age 74, both hemispheres 187.2
2309 Male, age 76, both hemispheres 167.5
Nuclei of the trapezoid body
nTPM: 170.8
2166 Male, age 80, both hemispheres 207.2
2368 Female, age 91, both hemispheres 202.4
2735 Female, age 85, both hemispheres 174.1
2159 Male, age 61, both hemispheres 158.2
1983 Male, age 76, both hemispheres 111.9
Nucleus ambiguus
nTPM: 166.3
2096 Female, age 85, both hemispheres 232.1
2071 Male, age 76, both hemispheres 100.5
Nucleus cuneatus
nTPM: 157.4
2805 Female, age 91, both hemispheres 190.8
2381 Male, age 80, both hemispheres 167.3
2376 Male, age 61, both hemispheres 160.2
2100 Male, age 76, both hemispheres 156.9
2131 Male, age 76, both hemispheres 155.4
2380 Male, age 80, both hemispheres 154.6
2562 Male, age 61, both hemispheres 153.9
2564 Male, age 74, both hemispheres 140.0
2808 Female, age 85, both hemispheres 137.2
Nucleus gracilis
nTPM: 125.0
2382 Male, age 80, both hemispheres 154.5
2299 Female, age 85, both hemispheres 117.5
2627 Male, age 74, both hemispheres 102.9
Nucleus raphe magnus
nTPM: 169.8
2459 Female, age 91, both hemispheres 201.2
2172 Female, age 85, both hemispheres 199.4
2328 Male, age 80, both hemispheres 193.6
2455 Male, age 74, both hemispheres 161.1
2160 Male, age 61, both hemispheres 141.9
2051 Male, age 76, both hemispheres 121.5
Nucleus raphe obscurus
nTPM: 131.7
2142 Male, age 76, midline 144.5
2800 Male, age 61, midline 138.9
2845 Female, age 85, midline 111.5
Nucleus raphe pallidus
nTPM: 136.3
2183 Male, age 80, midline 149.5
2145 Male, age 76, midline 148.5
1924 Male, age 61, midline 111.0
Nucleus tractus solitarii
nTPM: 122.4
2307 Male, age 80, both hemispheres 165.3
2191 Female, age 85, both hemispheres 132.8
2656 Male, age 76, both hemispheres 116.9
2144 Female, age 91, right hemisphere 74.7
Paramedian reticular nucleus
nTPM: 139.2
2057 Male, age 80, both hemispheres 153.0
2313 Male, age 61, both hemispheres 148.2
2050 Female, age 85, both hemispheres 132.5
2052 Male, age 76, both hemispheres 123.3
Parvicellular reticular nuclei
nTPM: 174.7
2558 Male, age 74, both hemispheres 213.4
2119 Male, age 80, both hemispheres 156.3
2095 Male, age 76, both hemispheres 154.3
Parvicellular reticular nuclei, medullary
nTPM: 146.9
2189 Female, age 91, both hemispheres 153.0
2181 Male, age 80, left hemisphere 149.1
2091 Female, age 85, both hemispheres 138.5
Pedunculopontine tegmental nucleus
nTPM: 145.6
2338 Male, age 61, both hemispheres 164.6
2334 Male, age 80, both hemispheres 138.8
1921 Female, age 85, both hemispheres 133.5
Peritrigeminal nucleus
nTPM: 124.3
2136 Male, age 76, both hemispheres 134.7
2179 Male, age 61, both hemispheres 130.1
2067 Female, age 85, both hemispheres 108.1
Pontine nuclei
nTPM: 158.9
2115 Male, age 80, left hemisphere 242.8
2319 Female, age 91, both hemispheres 182.6
2454 Male, age 74, left hemisphere 154.9
2109 Female, age 72, unknown 153.1
2787 Female, age 85, both hemispheres 152.6
1863 Male, age 55, unknown 129.2
2727 Male, age 61, right hemisphere 127.9
1968 Male, age 76, left hemisphere 127.7
Pontine raphe nucleus
nTPM: 136.6
2122 Female, age 85, midline 154.6
2853 Male, age 76, midline 118.6
Posteroventral cochlear nucleus
nTPM: 170.6
2341 Male, age 80, both hemispheres 198.3
2135 Female, age 91, both hemispheres 190.2
2371 Male, age 61, both hemispheres 165.3
2070 Male, age 76, both hemispheres 154.0
2752 Female, age 85, both hemispheres 145.0
Prepositus hypoglossal nucleus
nTPM: 131.0
2086 Male, age 80, both hemispheres 143.3
2855 Female, age 85, right hemisphere 118.7
Principal sensory trigeminal nucleus
nTPM: 172.3
2367 Female, age 91, left hemisphere 188.0
2008 Male, age 80, left hemisphere 172.6
2158 Male, age 61, both hemispheres 171.6
2324 Male, age 76, both hemispheres 156.9
Reticular pontine nucleus, caudal
nTPM: 177.7
2332 Male, age 80, right hemisphere 199.2
2457 Female, age 91, both hemispheres 193.2
2559 Male, age 74, both hemispheres 177.1
2092 Male, age 76, both hemispheres 141.0
Reticular pontine nucleus, oral
nTPM: 150.4
2366 Female, age 91, both hemispheres 190.7
2167 Male, age 76, both hemispheres 143.6
2361 Male, age 74, both hemispheres 140.6
2012 Female, age 85, both hemispheres 138.7
1939 Male, age 80, both hemispheres 138.4
Reticulotegmental nucleus
nTPM: 172.9
2333 Male, age 80, both hemispheres 189.0
2452 Male, age 74, both hemispheres 186.1
2322 Female, age 91, both hemispheres 170.2
2325 Male, age 76, both hemispheres 146.3
Spinal trigeminal nucleus, caudal
nTPM: 139.7
2308 Male, age 80, both hemispheres 167.4
2390 Female, age 91, both hemispheres 138.0
2312 Male, age 61, both hemispheres 136.5
2642 Male, age 74, both hemispheres 130.0
2447 Male, age 76, both hemispheres 126.2
Spinal trigeminal nucleus, interpolar
nTPM: 135.1
2389 Female, age 91, both hemispheres 158.7
2625 Male, age 61, both hemispheres 136.4
2033 Male, age 80, both hemispheres 135.9
2066 Male, age 76, right hemisphere 134.1
2386 Female, age 85, both hemispheres 110.3
Spinal trigeminal nucleus, oral
nTPM: 163.2
2164 Male, age 80, both hemispheres 189.3
2737 Female, age 85, both hemispheres 155.8
1978 Male, age 76, both hemispheres 144.3
Spinal vestibular nucleus
nTPM: 148.3
2384 Male, age 74, both hemispheres 169.7
2796 Male, age 61, both hemispheres 158.9
2780 Male, age 80, both hemispheres 146.5
2748 Male, age 76, both hemispheres 142.5
2806 Female, age 85, both hemispheres 136.2
2186 Female, age 91, both hemispheres 136.1
Subcoeruleus area
nTPM: 155.1
2451 Male, age 74, both hemispheres 177.5
2089 Male, age 76, left hemisphere 174.1
2323 Female, age 91, left hemisphere 152.5
2369 Female, age 85, left hemisphere 136.8
1958 Male, age 80, both hemispheres 134.4
Superior olive
nTPM: 173.2
2561 Female, age 91, both hemispheres 221.4
2329 Male, age 80, right hemisphere 199.8
2364 Male, age 74, right hemisphere 154.8
1875 Female, age 85, both hemispheres 148.2
2020 Male, age 76, both hemispheres 141.8
Superior vestibular nucleus
nTPM: 117.5
2061 Male, age 76, both hemispheres 138.6
2015 Male, age 80, both hemispheres 122.4
2383 Male, age 74, both hemispheres 91.5
Ventral medullary reticular nucleus
nTPM: 149.6
2060 Male, age 76, both hemispheres 163.5
2372 Male, age 61, both hemispheres 135.7
Ventral periolivary nuclei
nTPM: 183.9
2794 Female, age 91, left hemisphere 220.7
2130 Female, age 85, both hemispheres 201.6
2165 Male, age 80, both hemispheres 170.1
2023 Male, age 76, both hemispheres 142.9
Ventrolateral medulla, A1-C1 cell groups
nTPM: 142.8
2118 Male, age 80, both hemispheres 183.0
2302 Female, age 91, both hemispheres 138.0
1986 Male, age 76, both hemispheres 136.6
2180 Male, age 61, both hemispheres 128.8
2741 Female, age 85, both hemispheres 127.8
Ventrolateral tegmental area, A5 NE cell group
nTPM: 165.5
2456 Female, age 91, both hemispheres 228.0
2161 Male, age 80, both hemispheres 181.7
2449 Male, age 74, both hemispheres 167.1
1959 Male, age 76, both hemispheres 147.0
2359 Male, age 61, both hemispheres 145.4
2840 Female, age 85, both hemispheres 124.1

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 166.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 166.3
FF:10165-103B3 76 years, female 210.8
FF:10182-103D2 60 years, female 121.8
Medulla oblongata
Scaled Tags Per Million: 136.9
FF:10155-103A2 76 years, female 187.3
FF:10038-101F2 18-64 years, mixed 121.4
FF:10174-103C3 60 years, female 102.0
Pons
Scaled Tags Per Million: 149.0
FF:10033-101E6 18-54 years, mixed 149.0

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 23.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 19.6
Samples: 4

Max nTPM: 23.2
Min nTPM: 14.9
Sample A Female 18.2
Sample B Female 23.2
Sample C Male 22.0
Sample D Male 14.9
Pons
nTPM: 23.5
Samples: 4

Max nTPM: 30.8
Min nTPM: 17.8
Sample A Female 30.8
Sample B Female 24.9
Sample C Male 17.8
Sample D Male 20.3

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 47.2
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 47.2
Samples: 4

Max nTPM: 50.8
Min nTPM: 43.5
Sample A Male 49.2
Sample B Male 43.5
Sample C Female 50.8
Sample D Female 45.4

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 0.4
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.4
71789807 Antisense, RP_050921_03_F07, Mouse strain C57BL/6J (56 days, male) 0.4
Pons
Expression energy: 0.1
71789807 Antisense, RP_050921_03_F07, Mouse strain C57BL/6J (56 days, male) 0.1

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