HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:38.7 nTPM
HPA Brain:94.2 nTPM
GTEx:38.7 nTPM
FANTOM5:87.8 Scaled Tags Per Million
Pig:37.9 nTPM
Mouse:37.7 nTPM
Allen mouse:3.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036084Antibody CAB003808
Glial cells Not detectedNot detected
Neuronal cells MediumLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 94.2
Sample id Sample description nTPM
Hippocampus
nTPM: 77.5
2148 Female, age 91, left hemisphere 117.6
2621 Female, age 67, right hemisphere 97.8
1855 Male, age 76, left hemisphere 80.3
1898 Male, age 80, left hemisphere 62.6
2529 Female, age 94, left hemisphere 56.8
1911 Female, age 85, right hemisphere 50.2
Dentate gyrus
nTPM: 75.9
2531 Female, age 67, both hemispheres 150.4
1927 Female, age 91, both hemispheres 72.7
2246 Female, age 85, both hemispheres 71.6
2528 Male, age 74, both hemispheres 65.9
2530 Female, age 94, left hemisphere 48.6
2010 Male, age 76, both hemispheres 46.4
Entorhinal gyrus
nTPM: 72.3
2686 Male, age 75, right hemisphere 88.9
2764 Male, age 80, right hemisphere 79.2
2117 Female, age 91, right hemisphere 77.5
1938 Female, age 85, left hemisphere 71.6
1787 Male, age 76, left hemisphere 63.2
2613 Female, age 94, left hemisphere 53.1
Hippocampus, CA1
nTPM: 90.2
2045 Male, age 76, both hemispheres 124.4
2082 Female, age 91, right hemisphere 121.2
2749 Male, age 80, left hemisphere 79.8
2527 Male, age 74, both hemispheres 71.9
1873 Female, age 85, both hemispheres 53.9
Hippocampus, CA2
nTPM: 57.8
2113 Female, age 91, right hemisphere 111.9
1940 Female, age 85, left hemisphere 58.9
2249 Male, age 74, both hemispheres 50.7
2437 Female, age 94, left hemisphere 45.4
1892 Male, age 76, both hemispheres 44.8
1963 Male, age 80, left hemisphere 35.0
Hippocampus, CA3
nTPM: 93.1
2861 Female, age 67, both hemispheres 176.3
2620 Female, age 94, left hemisphere 157.3
2137 Male, age 80, left hemisphere 87.7
2436 Male, age 74, both hemispheres 49.7
1891 Female, age 85, both hemispheres 47.0
1867 Male, age 76, both hemispheres 40.5
Parahippocampal cortex
nTPM: 73.0
2245 Female, age 91, both hemispheres 113.1
2622 Female, age 67, right hemisphere 96.6
2693 Female, age 94, both hemispheres 80.1
1850 Male, age 80, both hemispheres 77.4
1933 Female, age 85, both hemispheres 66.2
2250 Female, age 67, right hemisphere 66.0
2532 Female, age 72, left hemisphere 63.9
2018 Male, age 76, both hemispheres 62.6
1990 Female, age 91, right hemisphere 57.9
2692 Male, age 74, both hemispheres 46.6
Perirhinal gyrus
nTPM: 94.2
1794 Male, age 80, right hemisphere 124.3
1847 Female, age 91, left hemisphere 97.3
2521 Female, age 94, right hemisphere 93.2
2848 Male, age 76, right hemisphere 91.5
1841 Female, age 85, right hemisphere 64.8
Subiculum
nTPM: 53.4
2729 Female, age 91, right hemisphere 108.7
1977 Female, age 85, both hemispheres 49.3
1901 Male, age 80, both hemispheres 47.6
2619 Male, age 74, both hemispheres 41.2
2042 Male, age 76, both hemispheres 40.8
2438 Female, age 94, left hemisphere 33.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 38.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.7
Samples: 255

Max nTPM: 136.8
Min nTPM: 6.6
Std nTPM: 23.3
Median nTPM: 33.5
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 136.8
GTEX-1RQEC-0011-R1b-SM-F2I2E 60-69 years, male 121.5
GTEX-1RQED-0011-R1a-SM-F3K5W 60-69 years, male 109.0
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 108.2
GTEX-11DYG-0011-R1a-SM-GI4X6 60-69 years, male 104.7
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 100.6
GTEX-11DXY-0011-R1b-SM-GI4VQ 60-69 years, male 99.9
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 96.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 93.2
GTEX-1JJEA-0011-R1b-SM-F6495 60-69 years, male 89.3
GTEX-1NV8Z-0011-R1b-SM-F647K 60-69 years, male 85.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 87.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 87.8
FF:10153-102I9 76 years, female 91.5
FF:10169-103B7 60 years, female 84.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 37.9
Pig sample Sample description nTPM
Subiculum
nTPM: 25.3
Samples: 4

Max nTPM: 31.3
Min nTPM: 21.8
Sample A Female 31.3
Sample B Female 23.9
Sample C Male 21.8
Sample D Male 24.1
Dorsal hippocampus
nTPM: 26.9
Samples: 4

Max nTPM: 37.0
Min nTPM: 17.3
Sample A Female 26.4
Sample B Female 37.0
Sample C Male 17.3
Sample D Male 26.9
Entorhinal cortex
nTPM: 37.9
Samples: 4

Max nTPM: 46.0
Min nTPM: 29.9
Sample A Female 40.5
Sample B Female 29.9
Sample C Male 46.0
Sample D Male 35.3
Ventral hippocampus
nTPM: 24.9
Samples: 4

Max nTPM: 33.3
Min nTPM: 16.5
Sample A Female 16.5
Sample B Female 24.3
Sample C Male 25.3
Sample D Male 33.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 37.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 33.5
Samples: 4

Max nTPM: 33.8
Min nTPM: 33.2
Sample A Male 33.8
Sample B Male 33.2
Sample C Female 33.3
Sample D Female 33.7
Hippocampal formation
nTPM: 37.7
Samples: 4

Max nTPM: 39.1
Min nTPM: 36.1
Sample A Male 36.9
Sample B Male 38.6
Sample C Female 39.1
Sample D Female 36.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.0
2186 Antisense, RP_Baylor_102754, Mouse strain C57BL/6J (56 days, male) 3.0
2185 Antisense, RP_Baylor_102754, Mouse strain C57BL/6J (56 days, male) 1.2

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