We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
TMEM35A
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • TMEM35A
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

127.854
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:55.8 nTPM
HPA Brain:157.4 nTPM
GTEx:55.8 nTPM
Pig:46.9 nTPM
Mouse:94.7 nTPM
Allen mouse:5.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA048583
Hypothalamus mean intensity 127.854
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus 33.733
Mammillary nucleus 7.517
Periventricular hypothalamic nucleus 63.870
Supraoptic nucleus 32.274
Tuberal nucleus 65.354
Ventral tuberomammillary nucleus -
Lateral preoptic area -
Medial preoptic area -
Suprachiasmatic nucleus -
Paraventricular hypothalamic nucleus 24.258
Anterior hypothalamic area, central -
Ventral medial hypothalamic nucleus 93.754
Ventral medial hypothalamic nucleus* 97.932
Arcuate nucleus 127.854
Arcuate nucleus* 94.884
Peduncular part of lateral hypothalmus 20.616
Dorsal medial hypothalamic nucleus 21.049
Stria terminalis* 45.839

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

157.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 157.4
2226 Male, age 75, left hemisphere 237.9
1961 Female, age 42, unknown 76.9
Dorsomedial nucleus
nTPM: 45.3
2041 Female, age 72, unknown 56.8
2017 Female, age 42, unknown 43.2
1989 Male, age 62, unknown 35.9
Lateral hypothalamic area
nTPM: 101.5
2271 Male, age 75, both hemispheres 133.6
2228 Male, age 66, unknown 119.6
1791 Male, age 80, right hemisphere 94.2
2412 Male, age 62, unknown 58.5
Mammillary body
nTPM: 32.7
1923 Female, age 72, unknown 43.5
2413 Male, age 66, unknown 38.0
1948 Female, age 72, unknown 33.5
1945 Male, age 80, right hemisphere 30.4
1834 Female, age 42, unknown 18.0
Paraventricular nucleus
nTPM: 55.9
2700 Male, age 62, unknown 55.9
Preoptic area
nTPM: 59.7
1907 Male, age 80, right hemisphere 92.3
2414 Female, age 72, unknown 47.9
1861 Female, age 42, unknown 38.8
Supraoptic nucleus
nTPM: 42.1
1894 Female, age 72, unknown 46.6
2835 Female, age 72, unknown 46.1
2043 Male, age 62, unknown 33.7
Ventromedial nucleus
nTPM: 97.4
1982 Female, age 72, unknown 106.9
1822 Female, age 42, unknown 88.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

55.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 55.8
Samples: 257

Max nTPM: 176.3
Min nTPM: 3.1
Std nTPM: 33.7
Median nTPM: 49.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 176.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 160.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 151.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 146.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 131.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 128.1
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 127.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 126.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 125.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 125.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 125.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 122.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 121.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 121.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 117.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 117.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 115.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 115.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 115.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 114.5
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 114.0
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 113.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 111.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 111.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 110.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 107.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 105.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 104.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 103.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 103.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 98.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 98.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 98.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 98.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 92.9
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 92.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 91.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 91.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 91.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 91.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 90.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 88.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 88.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 87.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 87.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 85.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 84.8
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 83.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 83.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 83.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 82.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 81.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 81.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 81.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 81.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 81.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 80.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 79.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 79.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 78.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 78.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 78.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 77.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 77.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 76.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 74.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 73.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 73.1
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 72.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 72.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 72.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 71.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 71.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 70.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 70.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 70.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 70.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 70.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 69.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 69.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 68.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 68.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 68.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 67.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 66.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 66.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 66.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 64.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 63.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 63.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 63.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 63.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 63.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 63.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 62.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 62.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 62.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 61.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 61.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 61.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 59.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 59.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 58.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 58.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 58.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 57.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 57.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 56.9
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 55.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 55.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 55.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 54.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 54.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 54.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 53.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 52.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 52.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 52.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 52.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 52.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 52.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 51.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 51.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 50.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 50.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 50.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 50.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 49.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 49.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 48.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 48.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 48.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 48.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 48.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 48.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 47.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 47.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 47.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 47.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 46.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 46.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 46.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 46.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 45.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 44.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 44.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 44.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 44.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 43.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 43.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 42.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 42.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 42.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 41.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 41.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 40.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 40.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 40.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 40.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 39.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 39.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 39.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 39.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 38.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 38.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 38.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 37.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 37.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 37.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 37.5
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 37.1
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 36.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 36.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 36.5
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 36.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 36.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 36.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 35.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 35.2
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 34.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 34.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 34.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 34.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 34.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 33.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 33.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 33.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 32.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 32.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 32.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 32.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 32.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 32.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 31.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 31.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 31.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 30.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 30.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 30.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 28.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 28.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 27.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 27.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 26.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 26.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 25.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 24.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 24.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 24.5
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 24.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 23.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 23.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 22.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 22.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 22.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 21.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 21.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 20.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 20.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 20.0
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 20.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 19.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 18.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 18.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 17.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 17.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 17.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 17.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 17.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 16.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 15.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 15.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 14.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 14.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 14.3
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 13.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 13.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 13.6
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 13.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 13.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 12.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 12.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 12.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 11.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 10.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 10.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 10.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 10.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 9.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 9.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 9.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 7.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 5.9
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 5.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 4.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 3.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 3.1
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

46.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 46.9
Samples: 4

Max nTPM: 56.9
Min nTPM: 33.1
Sample A Female 53.8
Sample B Female 33.1
Sample C Male 43.8
Sample D Male 56.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

94.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 94.8
Samples: 4

Max nTPM: 107.4
Min nTPM: 83.0
Sample A Male 94.4
Sample B Male 107.4
Sample C Female 94.2
Sample D Female 83.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 5.7
68845550 Antisense, RP_050224_02_A05, Mouse strain C57BL/6J (56 days, male) 5.9
71587898 Antisense, RP_050725_03_G02, Mouse strain C57BL/6J (56 days, male) 5.6

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo