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  • SUMMARY

  • TISSUE

  • BRAIN

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  • PIN1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:165.6 nTPM
HPA Brain:159.9 nTPM
GTEx:165.6 nTPM
Pig:131.1 nTPM
Mouse:17.6 nTPM
Allen mouse:0.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

159.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 123.3
2226 Male, age 75, left hemisphere 142.9
1961 Female, age 42, unknown 103.6
Dorsomedial nucleus
nTPM: 111.7
1989 Male, age 62, unknown 149.0
2041 Female, age 72, unknown 100.1
2017 Female, age 42, unknown 85.9
Lateral hypothalamic area
nTPM: 159.9
1791 Male, age 80, right hemisphere 188.4
2228 Male, age 66, unknown 177.9
2271 Male, age 75, both hemispheres 152.7
2412 Male, age 62, unknown 120.5
Mammillary body
nTPM: 129.5
1923 Female, age 72, unknown 188.5
1948 Female, age 72, unknown 126.3
2413 Male, age 66, unknown 124.0
1945 Male, age 80, right hemisphere 111.8
1834 Female, age 42, unknown 96.9
Paraventricular nucleus
nTPM: 104.6
2700 Male, age 62, unknown 104.6
Preoptic area
nTPM: 118.2
1907 Male, age 80, right hemisphere 144.1
1861 Female, age 42, unknown 109.5
2414 Female, age 72, unknown 101.1
Supraoptic nucleus
nTPM: 96.9
2835 Female, age 72, unknown 126.9
1894 Female, age 72, unknown 82.1
2043 Male, age 62, unknown 81.7
Ventromedial nucleus
nTPM: 109.5
1982 Female, age 72, unknown 132.7
1822 Female, age 42, unknown 86.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

165.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 165.6
Samples: 257

Max nTPM: 351.2
Min nTPM: 46.5
Std nTPM: 47.9
Median nTPM: 163.0
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 351.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 333.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 322.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 301.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 282.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 279.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 269.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 269.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 267.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 263.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 261.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 257.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 254.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 253.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 251.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 251.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 250.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 242.6
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 241.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 240.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 240.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 239.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 238.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 236.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 232.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 232.0
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 229.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 227.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 225.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 224.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 222.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 222.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 218.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 214.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 214.4
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 214.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 212.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 210.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 209.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 208.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 206.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 206.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 206.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 204.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 204.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 204.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 202.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 201.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 201.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 200.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 199.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 199.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 198.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 196.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 195.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 195.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 194.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 193.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 193.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 192.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 192.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 192.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 190.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 190.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 188.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 188.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 188.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 187.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 185.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 185.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 184.6
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 184.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 183.3
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 183.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 182.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 182.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 182.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 181.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 181.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 180.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 180.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 180.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 179.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 179.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 179.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 178.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 177.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 177.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 177.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 177.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 177.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 177.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 175.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 175.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 175.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 175.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 175.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 175.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 175.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 175.1
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 174.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 174.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 174.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 173.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 173.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 173.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 172.4
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 172.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 171.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 170.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 170.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 170.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 169.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 169.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 169.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 169.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 167.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 167.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 167.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 167.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 166.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 165.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 165.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 165.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 165.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 164.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 163.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 163.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 163.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 162.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 161.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 161.2
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 161.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 160.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 160.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 160.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 159.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 158.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 158.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 157.2
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 156.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 156.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 156.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 156.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 155.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 155.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 153.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 152.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 152.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 152.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 152.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 151.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 151.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 150.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 150.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 149.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 149.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 148.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 148.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 148.0
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 147.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 147.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 147.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 146.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 146.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 146.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 146.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 145.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 145.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 144.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 144.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 143.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 142.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 142.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 141.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 139.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 139.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 139.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 139.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 138.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 137.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 137.2
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 136.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 136.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 135.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 135.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 135.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 135.0
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 134.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 133.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 132.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 132.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 132.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 131.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 131.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 129.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 129.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 129.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 128.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 128.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 125.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 125.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 124.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 124.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 123.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 123.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 123.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 122.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 122.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 122.6
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 122.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 122.4
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 121.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 121.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 121.4
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 121.1
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 120.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 119.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 119.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 117.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 117.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 116.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 115.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 115.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 114.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 113.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 113.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 112.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 111.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 111.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 111.5
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 109.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 108.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 107.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 105.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 105.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 105.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 104.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 103.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 102.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 101.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 100.2
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 98.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 96.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 95.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 94.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 91.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 90.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 90.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 90.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 87.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 86.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 82.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 81.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 80.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 80.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 46.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

131.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 131.0
Samples: 4

Max nTPM: 171.9
Min nTPM: 105.1
Sample A Female 171.9
Sample B Female 133.5
Sample C Male 113.6
Sample D Male 105.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

17.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 17.7
Samples: 4

Max nTPM: 20.2
Min nTPM: 15.9
Sample A Male 17.7
Sample B Male 20.2
Sample C Female 16.8
Sample D Female 15.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.0
69783196 Antisense, RP_050505_04_E09, Mouse strain C57BL/6J (56 days, male) 0.0

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