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  • ZFP36
TISSUE PRIMARY DATA URINARY BLADDER Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Urinary bladder
Tissue proteome
Tissue methods
URINARY BLADDER - Expression summary
Protein expression
Urinary bladderi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Urothelial cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:521.0 nTPM
HPA:487.6 nTPM
GTEx:521.0 nTPM
FANTOM5:3274.7 Scaled Tags Per Million
URINARY BLADDER - SINGLE CELL RNA EXPRESSION
Explore single cell type data

URINARY BLADDER - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA006009
Urothelial cells Medium


URINARY BLADDER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

487.6
overview
Male, age 74
Urinary bladder sample 264
nTPM: 429.8
Cell types%
Urothelial cells:
5

Smooth muscle cells:
60

Fibroblasts:
20

Endothelial cells:
10

Other cell types:
5

overview
Male, age 80
Urinary bladder sample 265
nTPM: 75
Cell types%
Urothelial cells:
10

Smooth muscle cells:
45

Fibroblasts:
15

Endothelial cells:
10

Other cell types:
20

N/A
Female, age 0.1
Urinary bladder sample 1597
nTPM: 840.1
N/A
Female, age 0.1
Urinary bladder sample 1598
nTPM: 605.3

URINARY BLADDER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

521.0
GTEx sample id Sample description nTPM
Bladder
Average nTPM: 521.0
Samples: 77

Max nTPM: 1358.4
Min nTPM: 117.6
Std nTPM: 292.6
Median nTPM: 451.5
GTEX-T2IS-2526-SM-GRR23 20-29 years, female 1358.4
GTEX-S7SF-1126-SM-GQ1CH 20-29 years, female 1254.3
GTEX-OXRK-1926-SM-GRR1N 50-59 years, female 1169.0
GTEX-S32W-1126-SM-4AD5V 50-59 years, female 1088.1
GTEX-T6MO-0926-SM-GPRWN 40-49 years, female 1034.3
GTEX-OIZH-1926-SM-GPRXO 50-59 years, male 1031.4
GTEX-OOBK-1926-SM-HAUZL 40-49 years, male 964.8
GTEX-QXCU-2226-SM-GPI87 50-59 years, male 957.4
GTEX-QLQ7-1226-SM-GOQYE 60-69 years, male 937.6
GTEX-PWCY-1126-SM-H7OGX 20-29 years, female 928.1
GTEX-S3XE-1226-SM-4AD4L 50-59 years, male 928.0
GTEX-T8EM-1726-SM-GPRWO 40-49 years, male 910.6
GTEX-P78B-2126-SM-GQ1C3 40-49 years, female 909.5
GTEX-N7MT-1826-SM-GQ1C9 60-69 years, female 908.1
GTEX-T5JW-1026-SM-EZ6LR 20-29 years, female 763.2
GTEX-U3ZN-1226-SM-4DXUD 30-39 years, female 755.7
GTEX-OIZF-1926-SM-7PBZS 60-69 years, male 738.9
GTEX-P4PP-1926-SM-HAUZM 30-39 years, female 718.6
GTEX-S4Q7-0926-SM-4AD5D 20-29 years, male 717.1
GTEX-RUSQ-1326-SM-GQ1EA 50-59 years, male 700.0
GTEX-S4UY-0926-SM-4AD6O 40-49 years, female 697.1
GTEX-QCQG-0826-SM-GPI8H 50-59 years, female 690.0
GTEX-R45C-2426-SM-HL11G 60-69 years, female 680.9
GTEX-PW2O-1026-SM-GPRWA 20-29 years, male 612.0
GTEX-RNOR-2126-SM-EXURR 50-59 years, female 549.3
GTEX-U3ZH-0826-SM-H6Q7I 30-39 years, male 542.6
GTEX-QDT8-2826-SM-GOQYY 30-39 years, female 525.5
GTEX-RWSA-2126-SM-H7OG7 40-49 years, male 523.6
GTEX-T6MN-2226-SM-EVYAM 50-59 years, male 509.2
GTEX-TKQ2-0526-SM-GRR15 50-59 years, male 507.6
GTEX-RM2N-1026-SM-GOQY8 50-59 years, male 496.8
GTEX-R55G-1326-SM-HAUYU 40-49 years, female 492.1
GTEX-O5YT-1926-SM-H6Q82 20-29 years, male 485.3
GTEX-P4QT-1926-SM-HAUYQ 50-59 years, female 480.2
GTEX-R55C-1226-SM-GOQY7 40-49 years, male 473.8
GTEX-RWS6-1426-SM-GPRWQ 60-69 years, female 468.9
GTEX-OIZI-1926-SM-H7OGY 40-49 years, male 458.2
GTEX-QMRM-1326-SM-HAUYS 50-59 years, male 453.5
GTEX-PX3G-1926-SM-GQ1ED 20-29 years, female 451.5
GTEX-SNMC-0826-SM-4DM66 20-29 years, male 449.8
GTEX-QDVN-1426-SM-GPRWL 50-59 years, male 448.3
GTEX-N7MS-2126-SM-GRR2X 60-69 years, male 448.2
GTEX-Q2AH-1326-SM-GPRWF 40-49 years, male 441.0
GTEX-POMQ-0926-SM-H6Q6H 20-29 years, female 439.8
GTEX-P44H-2226-SM-E9U4P 40-49 years, male 433.7
GTEX-QV44-1426-SM-GPI8D 50-59 years, male 423.5
GTEX-SNOS-0526-SM-4DM54 40-49 years, male 423.4
GTEX-QEL4-1826-SM-EZ6KU 50-59 years, male 416.4
GTEX-OHPL-1926-SM-HAV18 60-69 years, female 394.8
GTEX-OHPM-1926-SM-H7OG1 50-59 years, male 387.2
GTEX-QDVJ-1526-SM-GPI84 50-59 years, male 380.7
GTEX-QEG4-2126-SM-GQ1CE 30-39 years, male 369.6
GTEX-S33H-1926-SM-EYYVH 30-39 years, male 365.3
GTEX-Q2AI-1026-SM-GRR3I 40-49 years, male 341.8
GTEX-PLZ5-1326-SM-GQ1C2 50-59 years, male 333.1
GTEX-QEG5-2326-SM-GRR2Z 20-29 years, male 325.0
GTEX-P4PQ-1926-SM-GRR14 60-69 years, male 293.9
GTEX-T5JC-1126-SM-GPIA1 20-29 years, male 288.9
GTEX-NPJ8-1126-SM-GNTAI 40-49 years, male 285.7
GTEX-SUCS-1226-SM-GPI9A 70-79 years, male 280.5
GTEX-P4QS-1926-SM-GQ1BY 60-69 years, male 275.2
GTEX-S95S-0626-SM-EZ6L8 60-69 years, male 255.3
GTEX-Q734-1226-SM-GRR21 40-49 years, female 240.7
GTEX-REY6-2026-SM-GPRYL 60-69 years, male 231.3
GTEX-R53T-1426-SM-H7OG3 50-59 years, female 226.5
GTEX-PWN1-1926-SM-HAUZN 40-49 years, female 223.8
GTEX-S4P3-0826-SM-H7OF3 50-59 years, female 205.8
GTEX-QLQW-0826-SM-H7OG2 30-39 years, male 194.9
GTEX-U4B1-1226-SM-4DXT7 40-49 years, male 191.4
GTEX-TMMY-1526-SM-4DXST 40-49 years, female 187.8
GTEX-OOBJ-1926-SM-GRR1P 60-69 years, male 181.6
GTEX-QV31-0926-SM-GQ1C6 30-39 years, male 163.0
GTEX-U3ZM-0826-SM-4DXU6 40-49 years, male 155.5
GTEX-SE5C-1026-SM-4BRUG 40-49 years, female 147.5
GTEX-RN64-2426-SM-EZ6L2 50-59 years, male 145.6
GTEX-OHPK-1926-SM-H7OF2 50-59 years, female 134.4
GTEX-PLZ6-1026-SM-GQ1C8 30-39 years, male 117.6
Show allShow less

URINARY BLADDER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

3274.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Bladder
Scaled Tags Per Million: 3274.7
FF:10011-101C2 55,58,79 years, mixed 3274.7

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