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  • TISSUE

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  • VGF
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expression
Hypothalamusi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Neuronal projections: High
Synapses: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:143.5 nTPM
HPA Brain:2693.3 nTPM
GTEx:143.5 nTPM
Pig:100.3 nTPM
Mouse:64.7 nTPM
Allen mouse:21.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Extended tissue profilei

For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.

, antibody HPA055177
Glial cells Not detected
Neuronal cells High
Neuronal projections High
Synapses Not detected

HYPOTHALAMUS - Extended tissue profilei

For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.

, antibody HPA072505
Glial cells Not detected
Neuronal cells High
Neuronal projections High
Synapses Not detected

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2693.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 2693.3
2226 Male, age 75, left hemisphere 5167.0
1961 Female, age 42, unknown 219.6
Dorsomedial nucleus
nTPM: 121.0
2041 Female, age 72, unknown 197.4
2017 Female, age 42, unknown 96.1
1989 Male, age 62, unknown 69.4
Lateral hypothalamic area
nTPM: 428.7
2271 Male, age 75, both hemispheres 725.0
1791 Male, age 80, right hemisphere 445.6
2228 Male, age 66, unknown 415.4
2412 Male, age 62, unknown 128.8
Mammillary body
nTPM: 64.4
1923 Female, age 72, unknown 93.5
1948 Female, age 72, unknown 72.7
2413 Male, age 66, unknown 70.3
1834 Female, age 42, unknown 60.2
1945 Male, age 80, right hemisphere 25.4
Paraventricular nucleus
nTPM: 110.9
2700 Male, age 62, unknown 110.9
Preoptic area
nTPM: 144.6
1907 Male, age 80, right hemisphere 276.5
1861 Female, age 42, unknown 79.3
2414 Female, age 72, unknown 78.0
Supraoptic nucleus
nTPM: 128.9
1894 Female, age 72, unknown 153.2
2835 Female, age 72, unknown 146.3
2043 Male, age 62, unknown 87.2
Ventromedial nucleus
nTPM: 113.6
1822 Female, age 42, unknown 132.5
1982 Female, age 72, unknown 94.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

143.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 143.5
Samples: 257

Max nTPM: 1486.1
Min nTPM: 4.7
Std nTPM: 175.8
Median nTPM: 97.3
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 1486.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 1072.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 1024.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 983.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 789.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 696.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 607.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 505.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 475.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 470.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 444.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 438.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 435.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 429.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 413.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 378.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 377.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 375.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 374.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 362.6
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 356.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 352.4
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 351.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 330.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 326.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 309.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 301.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 301.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 293.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 288.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 284.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 275.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 275.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 274.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 266.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 264.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 248.7
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 240.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 238.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 233.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 224.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 221.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 221.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 213.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 211.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 206.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 205.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 204.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 201.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 194.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 193.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 188.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 187.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 181.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 180.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 180.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 179.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 175.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 173.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 172.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 171.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 166.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 163.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 163.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 159.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 158.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 156.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 156.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 155.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 155.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 153.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 152.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 151.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 151.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 149.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 148.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 148.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 147.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 146.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 146.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 146.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 142.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 141.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 140.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 139.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 138.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 137.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 136.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 135.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 135.2
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 134.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 134.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 132.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 132.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 130.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 128.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 128.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 127.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 127.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 126.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 123.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 121.8
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 120.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 119.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 119.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 118.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 116.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 112.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 111.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 110.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 108.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 107.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 105.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 105.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 104.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 104.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 104.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 103.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 103.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 102.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 101.6
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 101.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 101.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 99.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 98.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 98.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 97.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 97.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 97.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 96.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 95.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 94.7
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 94.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 92.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 91.4
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 90.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 88.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 87.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 87.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 86.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 86.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 83.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 82.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 80.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 79.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 78.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 78.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 77.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 77.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 76.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 76.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 75.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 75.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 74.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 74.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 73.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 72.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 71.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 70.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 68.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 68.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 68.2
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 68.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 67.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 67.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 64.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 63.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 63.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 63.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 62.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 60.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 59.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 58.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 57.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 57.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 57.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 56.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 56.3
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 55.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 54.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 54.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 53.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 52.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 51.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 50.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 49.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 48.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 48.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 48.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 48.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 47.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 46.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 46.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 45.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 45.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 44.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 42.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 41.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 41.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 41.3
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 41.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 40.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 39.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 39.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 39.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 39.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 39.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 37.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 37.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 37.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 36.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 36.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 35.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 35.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 34.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 33.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 33.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 31.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 31.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 31.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 29.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 28.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 28.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 27.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 26.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 26.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 24.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 23.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 22.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 22.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 22.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 21.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 20.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 20.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 20.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 20.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 19.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 18.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 17.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 17.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 15.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 15.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 15.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 14.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 14.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 13.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 11.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 11.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 10.2
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 9.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 9.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 8.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 8.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 5.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 4.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 4.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 4.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

100.3
Pig sample Sample description nTPM
Hypothalamus
nTPM: 100.3
Samples: 4

Max nTPM: 125.7
Min nTPM: 67.1
Sample A Female 125.7
Sample B Female 67.1
Sample C Male 113.6
Sample D Male 94.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

64.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 64.7
Samples: 4

Max nTPM: 82.4
Min nTPM: 51.0
Sample A Male 70.3
Sample B Male 82.4
Sample C Female 55.1
Sample D Female 51.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

21.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 21.1
70299935 Antisense, RP_050602_03_E11, Mouse strain C57BL/6J (56 days, male) 21.1
71924165 Antisense, RP_050602_03_E11, Mouse strain C57BL/6J (56 days, male) 13.9

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