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CCDC136
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  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

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  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • CCDC136
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

211.373
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:45.2 nTPM
HPA Brain:71.7 nTPM
GTEx:45.2 nTPM
Pig:37.5 nTPM
Mouse:67.6 nTPM
Allen mouse:9.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA071015
Hypothalamus mean intensity 211.373
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus 66.788
Mammillary nucleus 46.467
Periventricular hypothalamic nucleus 211.373
Supraoptic nucleus 56.230
Tuberal nucleus 62.451
Ventral tuberomammillary nucleus 39.873
Lateral preoptic area 28.955
Medial preoptic area 35.156
Suprachiasmatic nucleus -
Paraventricular hypothalamic nucleus 45.033
Anterior hypothalamic area, central 51.376
Ventral medial hypothalamic nucleus 107.883
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 168.034
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 31.653
Dorsal medial hypothalamic nucleus -
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

71.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 36.8
2226 Male, age 75, left hemisphere 44.5
1961 Female, age 42, unknown 29.2
Dorsomedial nucleus
nTPM: 71.7
1989 Male, age 62, unknown 157.1
2041 Female, age 72, unknown 34.7
2017 Female, age 42, unknown 23.5
Lateral hypothalamic area
nTPM: 57.4
2228 Male, age 66, unknown 95.9
1791 Male, age 80, right hemisphere 51.8
2271 Male, age 75, both hemispheres 46.9
2412 Male, age 62, unknown 35.0
Mammillary body
nTPM: 39.5
2413 Male, age 66, unknown 61.9
1923 Female, age 72, unknown 52.4
1945 Male, age 80, right hemisphere 29.8
1948 Female, age 72, unknown 29.3
1834 Female, age 42, unknown 23.9
Paraventricular nucleus
nTPM: 34.4
2700 Male, age 62, unknown 34.4
Preoptic area
nTPM: 41.2
1907 Male, age 80, right hemisphere 58.3
2414 Female, age 72, unknown 35.5
1861 Female, age 42, unknown 29.6
Supraoptic nucleus
nTPM: 29.7
2835 Female, age 72, unknown 35.0
1894 Female, age 72, unknown 31.0
2043 Male, age 62, unknown 23.2
Ventromedial nucleus
nTPM: 27.7
1982 Female, age 72, unknown 29.4
1822 Female, age 42, unknown 26.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

45.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 45.2
Samples: 257

Max nTPM: 424.6
Min nTPM: 8.2
Std nTPM: 31.4
Median nTPM: 42.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 424.6
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 183.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 128.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 100.2
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 99.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 93.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 89.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 87.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 85.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 84.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 81.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 79.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 77.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 76.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 76.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 76.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 75.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 73.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 73.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 71.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 71.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 71.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 70.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 70.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 70.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 69.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 69.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 68.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 68.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 68.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 67.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 67.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 67.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 67.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 66.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 66.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 65.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 65.5
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 64.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 64.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 63.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 62.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 61.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 61.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 61.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 61.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 60.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 60.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 59.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 59.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 58.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 58.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 57.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 57.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 57.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 56.8
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 56.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 56.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 56.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 55.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 55.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 55.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 55.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 54.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 54.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 54.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 54.3
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 53.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 52.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 51.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 51.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 51.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 51.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 50.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 50.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 49.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 49.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 49.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 48.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 48.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 48.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 48.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 48.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 48.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 48.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 48.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 48.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 48.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 48.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 48.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 47.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 47.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 47.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 47.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 47.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 46.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 46.8
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 46.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 46.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 46.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 46.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 46.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 45.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 45.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 45.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 45.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 45.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 45.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 44.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 44.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 44.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 44.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 44.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 44.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 44.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 43.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 43.4
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 43.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 43.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 43.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 43.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 43.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 42.9
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 42.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 42.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 42.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 42.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 42.1
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 42.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 42.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 41.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 41.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 41.7
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 41.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 41.4
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 40.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 40.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 40.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 40.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 40.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 39.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 39.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 39.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 39.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 38.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 38.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 37.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 36.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 36.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 36.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 36.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 36.3
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 36.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 35.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 35.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 35.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 35.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 35.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 35.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 35.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 35.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 34.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 34.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 34.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 34.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 33.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 33.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 33.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 33.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 33.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 33.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 33.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 33.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 33.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 32.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 32.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 32.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 32.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 32.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 32.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 31.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 31.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 31.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 31.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 31.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 31.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 31.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 30.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 30.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 29.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 29.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 29.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 29.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 29.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 28.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 28.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 28.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 28.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 28.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 28.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 27.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 27.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 27.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 27.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 27.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 27.0
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 26.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 26.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 26.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 26.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 26.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 25.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 25.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 25.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 25.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 24.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 24.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 24.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 24.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 23.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 23.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 23.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 23.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 23.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 23.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 22.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 22.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 22.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 22.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 21.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 21.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 21.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 21.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 21.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 21.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 21.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 20.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 19.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 19.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 19.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 19.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 18.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 18.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 18.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 17.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 17.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 17.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 16.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 15.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 14.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 13.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 13.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 13.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 13.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 12.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 9.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 8.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

37.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 37.5
Samples: 4

Max nTPM: 50.2
Min nTPM: 32.4
Sample A Female 50.2
Sample B Female 33.8
Sample C Male 32.4
Sample D Male 33.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

67.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 67.6
Samples: 4

Max nTPM: 70.2
Min nTPM: 64.9
Sample A Male 67.0
Sample B Male 68.2
Sample C Female 70.2
Sample D Female 64.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

9.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 9.0
67936411 Antisense, RP_040617_01_E09, Mouse strain C57BL/6J (56 days, male) 9.0
324214 Antisense, RP_040617_01_E09, Mouse strain C57BL/6J (56 days, male) 4.6

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