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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:20.2 nTPM
HPA Brain:29.3 nTPM
GTEx:20.2 nTPM
Pig:14.9 nTPM
Mouse:8.5 nTPM
Allen mouse:4.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

29.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 23.0
1961 Female, age 42, unknown 25.6
2226 Male, age 75, left hemisphere 20.4
Dorsomedial nucleus
nTPM: 22.3
2017 Female, age 42, unknown 23.3
2041 Female, age 72, unknown 22.6
1989 Male, age 62, unknown 21.0
Lateral hypothalamic area
nTPM: 23.4
1791 Male, age 80, right hemisphere 30.1
2412 Male, age 62, unknown 26.7
2271 Male, age 75, both hemispheres 19.6
2228 Male, age 66, unknown 17.2
Mammillary body
nTPM: 28.0
1923 Female, age 72, unknown 33.8
2413 Male, age 66, unknown 32.8
1834 Female, age 42, unknown 28.9
1948 Female, age 72, unknown 25.9
1945 Male, age 80, right hemisphere 18.8
Paraventricular nucleus
nTPM: 21.2
2700 Male, age 62, unknown 21.2
Preoptic area
nTPM: 22.4
1861 Female, age 42, unknown 25.4
1907 Male, age 80, right hemisphere 24.5
2414 Female, age 72, unknown 17.4
Supraoptic nucleus
nTPM: 29.3
2835 Female, age 72, unknown 37.8
2043 Male, age 62, unknown 27.8
1894 Female, age 72, unknown 22.2
Ventromedial nucleus
nTPM: 22.4
1822 Female, age 42, unknown 25.6
1982 Female, age 72, unknown 19.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

20.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 20.2
Samples: 257

Max nTPM: 51.6
Min nTPM: 6.4
Std nTPM: 8.6
Median nTPM: 17.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 51.6
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 49.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 48.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 48.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 47.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 46.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 46.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 44.7
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 41.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 40.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 39.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 37.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 36.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 36.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 35.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 34.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 34.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 34.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 34.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 34.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 33.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 33.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 33.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 32.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 32.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 32.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 32.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 31.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 31.5
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 31.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 30.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 30.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 30.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 30.0
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 30.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 29.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 29.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 29.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 29.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 28.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 28.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 28.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 28.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 28.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 27.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 27.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 27.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 27.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 27.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 27.2
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 27.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 27.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 26.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 26.5
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 26.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 26.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 26.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 26.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 25.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 25.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 25.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 25.4
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 25.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 25.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 25.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 24.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 24.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 24.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 24.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 24.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 23.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 23.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 23.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 23.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 23.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 23.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 23.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 23.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 23.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 22.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 22.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 22.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 22.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 22.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 22.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 21.6
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 21.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 21.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 21.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 20.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 20.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 20.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 20.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 20.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 20.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 20.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 20.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 20.1
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 20.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 19.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 19.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 19.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 19.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 19.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 19.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 19.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 19.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 19.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 19.4
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 19.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 19.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 19.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 19.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 19.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 18.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 18.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 18.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 18.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 18.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 18.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 18.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 18.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 18.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 18.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 18.1
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 18.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 18.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 17.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 17.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 17.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 17.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 17.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 17.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 17.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 17.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 17.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 17.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 17.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 17.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 17.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 16.9
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 16.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 16.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 16.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 16.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 16.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 16.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 16.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 16.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 16.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 16.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 16.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 16.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 16.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 16.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 16.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 16.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 16.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 16.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 16.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 16.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 15.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 15.7
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 15.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 15.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 15.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 15.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 15.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 15.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 15.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 15.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 15.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 15.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 14.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 14.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 14.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 14.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 14.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 14.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 14.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 14.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 14.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 14.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 14.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 14.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 14.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 14.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 14.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 14.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 14.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 14.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 14.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 14.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 14.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 14.0
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 14.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 13.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 13.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 13.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 13.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 13.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 13.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 13.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 13.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 13.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 13.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 13.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 13.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 13.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 13.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 13.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 13.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 13.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 13.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 13.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 12.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 12.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 12.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 12.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 12.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 12.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 12.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 12.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 12.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 11.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 11.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 11.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 11.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 11.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 11.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 11.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 11.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 11.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 11.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 11.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 11.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 11.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 11.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 11.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 11.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 11.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 10.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 10.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 10.4
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 10.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 10.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 10.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 10.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 9.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 9.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 9.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 8.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 7.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 7.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 7.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 6.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 6.4
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

14.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 15.0
Samples: 4

Max nTPM: 17.3
Min nTPM: 13.8
Sample A Female 14.1
Sample B Female 14.6
Sample C Male 17.3
Sample D Male 13.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

8.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 8.5
Samples: 4

Max nTPM: 9.4
Min nTPM: 7.6
Sample A Male 8.4
Sample B Male 9.4
Sample C Female 7.6
Sample D Female 8.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 4.1
119697 Antisense, RP_040507_01_E07, Mouse strain C57BL/6J (56 days, male) 4.1

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