We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
SAFB2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • SAFB2
TISSUE PRIMARY DATA LIVER Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Liver
Tissue proteome
Liver
Tissue methods
LIVER - Expression summary
Protein expression
Liveri

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cholangiocytes: Medium
Hepatocytes: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:32.0 nTPM
HPA:13.7 nTPM
GTEx:32.0 nTPM
FANTOM5:69.8 Scaled Tags Per Million
LIVER - SINGLE CELL RNA EXPRESSION
Explore single cell type data

LIVER - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA050894
Cholangiocytes Medium
Hepatocytes Medium



LIVER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

13.7
N/A
Female, age 60
Liver sample 21
nTPM: 22
overview
Male, age 54
Liver sample 23
nTPM: 18.6
Cell types%
Hepatocytes:
80

Fibroblasts:
15

Other cell types:
5

overview
Male, age 74
Liver sample 24
nTPM: 17.5
Cell types%
Hepatocytes:
85

Fibroblasts:
5

Other cell types:
10

overview
Female, age 62
Liver sample 350
nTPM: 8.5
Cell types%
Hepatocytes:
70

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Liver sample 351
nTPM: 17.3
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Male, age 53
Liver sample 352
nTPM: 11.6
Cell types%
Hepatocytes:
80

Fibroblasts:
5

Other cell types:
15

overview
Male, age 77
Liver sample 353
nTPM: 10.5
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Female, age 72
Liver sample 359
nTPM: 12.2
Cell types%
Hepatocytes:
50

Fibroblasts:
10

Other cell types:
40

overview
Male, age 70
Liver sample 367
nTPM: 10.9
Cell types%
Hepatocytes:
65

Fibroblasts:
10

Other cell types:
25

overview
Female, age 23
Liver sample 396
nTPM: 8.2
Cell types%
Hepatocytes:
70

Fibroblasts:
5

Other cell types:
25


LIVER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

32.0
GTEx sample id Sample description nTPM
Liver
Average nTPM: 32.0
Samples: 262

Max nTPM: 80.3
Min nTPM: 16.1
Std nTPM: 8.9
Median nTPM: 30.7
GTEX-WWYW-1026-SM-GQ1CM 50-59 years, female 80.3
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 57.9
GTEX-18465-1626-SM-7LG6N 50-59 years, male 54.9
GTEX-1HCU6-2026-SM-GA91U 60-69 years, female 53.4
GTEX-OXRK-1226-SM-HLJR8 50-59 years, female 53.2
GTEX-1IDJH-1526-SM-GA8ZW 70-79 years, male 52.7
GTEX-1H1DF-1326-SM-9WPPR 40-49 years, female 52.5
GTEX-111FC-1226-SM-HAV27 60-69 years, male 51.4
GTEX-11GSP-0626-SM-5986T 60-69 years, female 50.7
GTEX-15ER7-1826-SM-6LLI7 20-29 years, female 50.0
GTEX-1HBPH-2626-SM-A96TV 40-49 years, female 49.9
GTEX-XXEK-1126-SM-4BRUX 50-59 years, male 49.7
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 48.5
GTEX-132AR-0426-SM-5IFH8 50-59 years, female 47.4
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 47.4
GTEX-1HBPI-1026-SM-AHZ4N 50-59 years, male 47.0
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 46.8
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 46.4
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 46.3
GTEX-1AX9I-1626-SM-72D5D 60-69 years, male 45.9
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 45.9
GTEX-15CHQ-0926-SM-HAV1W 60-69 years, male 45.8
GTEX-13S7M-1126-SM-HAV2A 60-69 years, female 45.4
GTEX-1LB8K-1926-SM-HLJQQ 50-59 years, male 45.2
GTEX-15SZO-1226-SM-6LPIP 50-59 years, male 45.0
GTEX-11TUW-1726-SM-5BC5C 60-69 years, male 44.9
GTEX-1OJC4-1126-SM-HLJQI 50-59 years, female 44.7
GTEX-1HCU7-1726-SM-B2LX9 50-59 years, male 44.3
GTEX-13O1R-2026-SM-5KM3N 60-69 years, male 43.4
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 43.2
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 43.2
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 42.7
GTEX-O5YV-0726-SM-EV798 60-69 years, female 42.7
GTEX-12696-0826-SM-5EGGE 60-69 years, male 42.6
GTEX-1GF9X-0426-SM-7MKHN 40-49 years, female 42.4
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 41.6
GTEX-N7MS-1825-SM-HLJR9 60-69 years, male 41.6
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 41.0
GTEX-WL46-1726-SM-HAUZC 50-59 years, male 40.9
GTEX-13PVQ-1526-SM-5IFEQ 50-59 years, male 40.5
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 40.3
GTEX-1RQED-0726-SM-HLJQL 60-69 years, male 40.2
GTEX-1S5VW-1826-SM-EAZ53 60-69 years, male 40.1
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 40.1
GTEX-1A8FM-1226-SM-7IGMD 50-59 years, female 40.0
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 39.9
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 39.8
GTEX-15DYW-1326-SM-6LPIV 60-69 years, female 39.5
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 39.3
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 39.2
GTEX-RN64-1826-SM-48FDV 50-59 years, male 39.1
GTEX-1RQEC-1126-SM-EAZ5E 60-69 years, male 38.9
GTEX-15SHU-1826-SM-7KUKS 40-49 years, female 38.8
GTEX-1J8EW-1626-SM-C1YQ8 60-69 years, female 38.8
GTEX-Q734-0326-SM-48U15 40-49 years, female 38.6
GTEX-17HGU-1826-SM-7IGQM 50-59 years, male 38.3
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 38.3
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 38.2
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 38.1
GTEX-1H23P-1826-SM-GA91S 60-69 years, male 38.0
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 37.9
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 37.8
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 37.6
GTEX-QEL4-1226-SM-447A4 50-59 years, male 37.5
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 37.4
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 37.2
GTEX-1B8SG-1326-SM-79ONT 50-59 years, male 37.2
GTEX-1KWVE-0326-SM-EV7AF 30-39 years, male 37.1
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 37.0
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 37.0
GTEX-1H1CY-1026-SM-HLJS4 60-69 years, female 36.9
GTEX-1EKGG-1226-SM-7IGNO 60-69 years, male 36.7
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 36.6
GTEX-14A6H-0726-SM-HAV28 30-39 years, male 36.6
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 36.3
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 35.9
GTEX-11TT1-1726-SM-5EQLJ 20-29 years, male 35.8
GTEX-1KANB-2226-SM-DHXJW 50-59 years, male 35.8
GTEX-1R9PM-0526-SM-F2I1T 20-29 years, male 35.7
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 35.4
GTEX-16MT8-2126-SM-HAV1Q 60-69 years, female 35.3
GTEX-1C6VQ-1626-SM-79OO1 50-59 years, male 35.2
GTEX-1I1HK-1126-SM-AHZ2L 60-69 years, male 35.2
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 34.9
GTEX-13112-1426-SM-5EGH8 50-59 years, male 34.8
GTEX-17F96-1226-SM-79OK2 70-79 years, male 34.6
GTEX-1GN2E-0926-SM-9WPOH 60-69 years, male 34.5
GTEX-11ZUS-2526-SM-59872 30-39 years, male 34.4
GTEX-QXCU-1826-SM-HLJS6 50-59 years, male 34.4
GTEX-16YQH-1126-SM-HAV2D 30-39 years, male 34.3
GTEX-16Z82-1426-SM-HAV2I 60-69 years, male 34.3
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 34.1
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 34.1
GTEX-1ICLY-1526-SM-C1YS4 50-59 years, male 34.1
GTEX-13113-1326-SM-5GCOI 60-69 years, female 33.9
GTEX-1GN1U-0926-SM-9WPPY 50-59 years, female 33.9
GTEX-1H11D-0826-SM-9OSWB 40-49 years, male 33.7
GTEX-1IKJJ-1526-SM-C1YSC 60-69 years, male 33.7
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 33.6
GTEX-1HB9E-0626-SM-AHZ4K 50-59 years, male 33.5
GTEX-S7SE-1326-SM-HLJRN 50-59 years, male 33.4
GTEX-1JMLX-1326-SM-CXZJO 50-59 years, male 33.3
GTEX-1EH9U-1126-SM-7IGLU 60-69 years, male 33.1
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 33.1
GTEX-1B932-1426-SM-793AN 40-49 years, female 33.0
GTEX-1QP66-0226-SM-DPRXS 50-59 years, male 32.9
GTEX-1I1GR-1526-SM-CNNQE 60-69 years, male 32.8
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 32.8
GTEX-1A32A-0826-SM-72D5C 50-59 years, female 32.7
GTEX-QESD-2026-SM-447BI 20-29 years, male 32.7
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 32.6
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 32.5
GTEX-18A6Q-2026-SM-718AQ 60-69 years, male 32.5
GTEX-S33H-1626-SM-4AD68 30-39 years, male 32.4
GTEX-1KD4Q-1526-SM-D4P3L 40-49 years, male 32.3
GTEX-P78B-1326-SM-3P611 40-49 years, female 32.2
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 31.9
GTEX-1KAFJ-0726-SM-CXZKF 50-59 years, male 31.8
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 31.7
GTEX-15UF7-0426-SM-HAV2G 40-49 years, male 31.7
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 31.6
GTEX-14PJO-1726-SM-68719 60-69 years, male 31.5
GTEX-1GF9V-1226-SM-7MKGY 60-69 years, male 31.5
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 31.5
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 31.4
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 31.4
GTEX-1AX8Z-1026-SM-7189R 60-69 years, male 31.3
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 31.2
GTEX-1R9JW-0826-SM-DPRZJ 30-39 years, female 31.0
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 30.8
GTEX-1GZ4I-1526-SM-9OSW9 50-59 years, male 30.8
GTEX-13OVJ-1026-SM-5IFGI 50-59 years, female 30.7
GTEX-13OVL-0726-SM-HAV29 50-59 years, male 30.6
GTEX-1MJIX-0726-SM-DPRYP 40-49 years, male 30.6
GTEX-144GL-1426-SM-5O9BO 50-59 years, male 30.5
GTEX-WK11-1326-SM-4M9QU 50-59 years, male 30.5
GTEX-1QP6S-1326-SM-DPRZ8 40-49 years, male 30.4
GTEX-1QPFJ-1126-SM-E9U5V 30-39 years, female 30.3
GTEX-O5YT-0826-SM-3TW8N 20-29 years, male 30.3
GTEX-QV44-0326-SM-C1YQX 50-59 years, male 30.3
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 30.3
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 30.3
GTEX-1GF9W-0826-SM-7MKHI 60-69 years, male 30.2
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 30.1
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 30.1
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 30.0
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 29.8
GTEX-1K9T9-0726-SM-CXZJZ 50-59 years, female 29.7
GTEX-1LGRB-0626-SM-CNNQH 50-59 years, female 29.5
GTEX-O5YW-0826-SM-HK7A3 50-59 years, male 29.5
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 29.4
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 29.4
GTEX-1LSNL-2026-SM-HLJQ4 50-59 years, male 29.3
GTEX-17HII-1026-SM-7IGLY 50-59 years, male 29.2
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 29.0
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 28.9
GTEX-U8XE-1526-SM-4E3HT 30-39 years, male 28.9
GTEX-1I1GV-1026-SM-GA8Z8 60-69 years, male 28.8
GTEX-147GR-1326-SM-7IGLB 60-69 years, male 28.7
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 28.6
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 28.4
GTEX-QEG4-1826-SM-CKZN9 30-39 years, male 28.3
GTEX-S32W-1926-SM-4AD63 50-59 years, female 28.3
GTEX-14BIL-1326-SM-5O9CZ 50-59 years, male 28.2
GTEX-15RJE-1126-SM-6LPI5 40-49 years, male 28.1
GTEX-1KD5A-1226-SM-CXZK7 50-59 years, male 28.1
GTEX-R53T-0326-SM-48FEC 50-59 years, female 27.8
GTEX-1399T-0826-SM-5IFES 60-69 years, male 27.7
GTEX-W5X1-0126-SM-HLJRF 40-49 years, female 27.6
GTEX-1JJEA-1526-SM-CNNPK 60-69 years, male 27.4
GTEX-WQUQ-1926-SM-4M9QM 60-69 years, male 27.4
GTEX-17MF6-1126-SM-7DUFS 40-49 years, male 27.3
GTEX-1EWIQ-0726-SM-7MKFW 70-79 years, female 27.3
GTEX-RU72-1426-SM-46MUF 50-59 years, female 27.2
GTEX-1A8G7-1126-SM-731ED 60-69 years, male 27.1
GTEX-1B933-1226-SM-731DW 50-59 years, female 27.1
GTEX-1BAJH-1526-SM-7RHGI 70-79 years, male 27.1
GTEX-1J1OQ-0826-SM-CXZJG 40-49 years, female 27.1
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 26.9
GTEX-18A66-2026-SM-7189C 60-69 years, male 26.9
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 26.9
GTEX-Y111-0726-SM-EYYVM 50-59 years, male 26.9
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 26.7
GTEX-1B8L1-0726-SM-7P8RT 60-69 years, male 26.7
GTEX-1JJ6O-0826-SM-CXZJL 60-69 years, male 26.7
GTEX-14XAO-0226-SM-68728 60-69 years, female 26.6
GTEX-1EN7A-2026-SM-7MGY4 40-49 years, male 26.6
GTEX-REY6-1226-SM-48FDR 60-69 years, male 26.6
GTEX-1NV8Z-1626-SM-DPRYT 60-69 years, male 26.5
GTEX-18A7A-1526-SM-72D69 50-59 years, female 26.3
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 26.3
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 26.2
GTEX-ZEX8-0826-SM-4WKHK 50-59 years, male 26.2
GTEX-YECK-1926-SM-4W21H 60-69 years, male 26.1
GTEX-1PBJJ-0626-SM-DPRYO 30-39 years, male 26.0
GTEX-1PIIG-1326-SM-EXOIR 30-39 years, male 26.0
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 25.9
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 25.8
GTEX-1E2YA-1226-SM-7MGY3 50-59 years, male 25.8
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 25.7
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 25.7
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 25.5
GTEX-18D9B-1526-SM-7KFRK 60-69 years, male 25.5
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 25.1
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 25.0
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 24.9
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 24.9
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 24.5
GTEX-13X6J-1826-SM-5TDCT 50-59 years, male 24.4
GTEX-1GN73-1126-SM-9OSW5 60-69 years, male 24.4
GTEX-1CB4F-1726-SM-7MGXH 60-69 years, male 24.3
GTEX-SIU8-1226-SM-HLJRG 50-59 years, male 24.3
GTEX-1IKK5-0326-SM-C1YPY 60-69 years, male 24.2
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 24.2
GTEX-1PPGY-2226-SM-F2I29 60-69 years, male 24.1
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 23.9
GTEX-1S3DN-1126-SM-HLJQO 50-59 years, male 23.9
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 23.8
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 23.7
GTEX-OHPM-0826-SM-HLJRC 50-59 years, male 23.7
GTEX-17EVP-1026-SM-7IGOZ 40-49 years, male 23.4
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 23.3
GTEX-148VI-0626-SM-5TDDH 60-69 years, female 23.3
GTEX-OIZF-0826-SM-7MKH9 60-69 years, male 23.3
GTEX-14JG1-1626-SM-664NH 40-49 years, male 23.2
GTEX-WY7C-0726-SM-4ONCB 50-59 years, male 23.2
GTEX-1HT8W-0826-SM-C1YRJ 30-39 years, male 23.0
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 22.9
GTEX-1F75A-1626-SM-9JGGT 50-59 years, male 22.9
GTEX-1QCLZ-1226-SM-EAZ49 60-69 years, female 22.7
GTEX-14PHX-0526-SM-664NW 50-59 years, male 22.2
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 22.1
GTEX-X261-1726-SM-4PQYT 50-59 years, male 22.1
GTEX-14E7W-1526-SM-6871X 70-79 years, male 22.0
GTEX-1B996-1426-SM-7EPIA 60-69 years, male 22.0
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 21.7
GTEX-1LH75-0926-SM-EAZ5C 50-59 years, female 21.6
GTEX-XPVG-1126-SM-HLJRE 50-59 years, male 21.4
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 21.4
GTEX-1HCVE-1526-SM-B2LWW 50-59 years, male 21.2
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 21.1
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 21.1
GTEX-1ICG6-1026-SM-B2LY6 70-79 years, female 20.9
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 20.6
GTEX-ZF29-2026-SM-DNZYW 60-69 years, female 20.6
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 20.2
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 20.2
GTEX-Y3IK-0326-SM-HLJRD 50-59 years, female 20.1
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 20.1
GTEX-1CB4J-0726-SM-7IGN8 60-69 years, male 19.6
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 19.5
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 19.3
GTEX-11EMC-0326-SM-HAV2K 60-69 years, female 18.7
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 18.7
GTEX-WVLH-2126-SM-EYYWD 50-59 years, male 18.3
GTEX-17HHE-0126-SM-79398 50-59 years, male 17.4
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 17.0
GTEX-1AMFI-0826-SM-731DV 50-59 years, female 17.0
GTEX-15RJ7-2026-SM-6LPJ4 40-49 years, male 16.7
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 16.6
GTEX-1CAMQ-1426-SM-7MKFL 40-49 years, male 16.4
GTEX-13G51-0626-SM-HK7AV 60-69 years, male 16.1
Show allShow less

LIVER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

69.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Liver
Scaled Tags Per Million: 69.8
FF:10018-101C9 64,69,70 years, mixed 69.8

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo