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RPL36
HPA
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  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

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  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • RPL36
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
Tissue methods
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

GTEx:528.4 nTPM
FANTOM5:176.2 Scaled Tags Per Million
Pig:205.3 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA047153
Glial cells High
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

528.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 528.4
Samples: 300

Max nTPM: 2279.6
Min nTPM: 168.6
Std nTPM: 216.8
Median nTPM: 487.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 2279.6
GTEX-1NV5F-0011-R5b-SM-F3K3I 60-69 years, female 1847.6
GTEX-1POEN-0011-R5b-SM-F2T9Z 30-39 years, female 1414.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1248.8
GTEX-1192W-0011-R5a-SM-GI4VY 60-69 years, male 1177.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1145.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1025.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 986.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 966.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 944.8
GTEX-14E6C-0011-R5b-SM-G9ERG 40-49 years, male 924.3
GTEX-1LH75-0011-R5b-SM-F2TAO 50-59 years, female 902.1
GTEX-1JMQK-0011-R5a-SM-G8LKV 60-69 years, male 898.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 888.5
GTEX-1R46S-0011-R5b-SM-F342A 60-69 years, female 887.5
GTEX-1LB8K-0011-R5b-SM-G8OKO 50-59 years, male 862.2
GTEX-1QEPI-0011-R5b-SM-F649S 60-69 years, female 843.3
GTEX-1LKK1-0011-R5b-SM-EY5YB 50-59 years, female 840.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 840.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 836.7
GTEX-1MA7X-0011-R5a-SM-F341K 60-69 years, male 835.1
GTEX-1RLM8-0011-R5a-SM-F3K4P 50-59 years, male 819.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 814.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 807.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 796.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 777.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 774.0
GTEX-1JMLX-0011-R5b-SM-EY5YK 50-59 years, male 750.9
GTEX-1N5O9-0011-R5a-SM-F3K46 60-69 years, male 723.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 722.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 718.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 716.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 715.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 713.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 711.9
GTEX-14C5O-0011-R5a-SM-G8W84 60-69 years, male 706.8
GTEX-11EI6-0011-R5a-SM-GINAM 60-69 years, male 704.8
GTEX-11EMC-0011-R5a-SM-GJ3PK 60-69 years, female 699.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 695.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 686.2
GTEX-1MJK2-0011-R5b-SM-F3427 50-59 years, male 682.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 682.3
GTEX-UTHO-0011-R5A-SM-G8W6H 60-69 years, male 679.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 671.1
GTEX-1LVA9-0011-R5a-SM-F6492 50-59 years, male 669.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 668.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 666.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 663.9
GTEX-1QP6S-0011-R5a-SM-F648S 40-49 years, male 662.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 661.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 659.8
GTEX-1JMOU-0011-R5b-SM-EY5ZM 60-69 years, female 658.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 656.6
GTEX-1KWVE-0011-R5a-SM-G8LLB 30-39 years, male 656.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 653.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 652.7
GTEX-15UF6-0011-R5a-SM-H7OFA 70-79 years, female 649.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 648.7
GTEX-13QJC-0011-R5a-SM-GJ3QH 60-69 years, female 648.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 643.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 641.4
GTEX-11ZU8-0011-R5a-SM-GJ3PY 60-69 years, male 640.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 639.6
GTEX-1NV8Z-0011-R5a-SM-G8LKX 60-69 years, male 638.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 636.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 629.6
GTEX-15DDE-0011-R5b-SM-7KULJ 50-59 years, female 627.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 624.7
GTEX-1PWST-0011-R5a-SM-F648V 70-79 years, male 624.6
GTEX-1RAZS-0011-R5b-SM-F341U 50-59 years, male 620.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 620.4
GTEX-1CB4J-0011-R5a-SM-9WG5Y 60-69 years, male 615.5
GTEX-1KD4Q-0011-R5a-SM-EY5Y8 40-49 years, male 615.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 614.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 613.8
GTEX-1RDX4-0011-R5a-SM-F33ZH 50-59 years, female 613.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 606.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 603.9
GTEX-1JMQL-0011-R5a-SM-F3424 50-59 years, female 602.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 598.7
GTEX-12584-0011-R5b-SM-GIN96 40-49 years, male 596.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 590.1
GTEX-1117F-0011-R5a-SM-GI4VW 60-69 years, female 589.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 589.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 586.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 586.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 584.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 584.1
GTEX-1MCQQ-0011-R5b-SM-GJ3RW 60-69 years, male 583.4
GTEX-1ICLZ-0011-R5a-SM-CMKHM 60-69 years, male 583.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 575.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 573.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 572.6
GTEX-1O9I2-0011-R5a-SM-F648P 50-59 years, male 572.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 572.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 570.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 569.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 568.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 566.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 564.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 559.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 559.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 558.0
GTEX-1JN6P-0011-R5b-SM-G9EPO 60-69 years, male 558.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 557.9
GTEX-117XS-0011-R5b-SM-GJ3PP 60-69 years, male 557.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 555.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 553.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 553.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 553.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 552.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 546.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 545.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 542.6
GTEX-ZAK1-0011-R5a-SM-GRR32 50-59 years, female 542.0
GTEX-11TUW-0011-R5b-SM-5BC6Q 60-69 years, male 541.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 539.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 538.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 532.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 531.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 531.2
GTEX-1LVAO-0011-R5a-SM-EY5Y6 60-69 years, male 528.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 527.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 527.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 526.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 524.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 522.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 521.8
GTEX-12126-0011-R5b-SM-GIN98 20-29 years, male 521.2
GTEX-ZYY3-0011-R5a-SM-H7OGH 60-69 years, female 519.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 517.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 515.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 514.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 509.3
GTEX-1LSNL-0011-R5a-SM-F3K49 50-59 years, male 507.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 506.4
GTEX-11GSO-0011-R5b-SM-GJ3RA 60-69 years, male 505.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 505.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 502.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 502.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 502.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 501.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 498.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 497.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 495.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 495.0
GTEX-1N2EE-0011-R5a-SM-EY5YF 60-69 years, male 494.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 493.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 489.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 488.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 486.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 485.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 484.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 483.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 482.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 481.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 479.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 479.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 478.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 476.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 474.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 473.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 473.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 471.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 468.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 468.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 467.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 467.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 467.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 464.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 464.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 464.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 462.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 462.0
GTEX-1OJC4-0011-R5b-SM-F3K55 50-59 years, female 461.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 459.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 459.7
GTEX-16GPK-0011-R5b-SM-GRR3C 60-69 years, male 459.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 459.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 458.7
GTEX-ZYFD-0011-R5a-SM-H6Q7M 50-59 years, male 454.5
GTEX-11ZUS-0011-R5b-SM-GIN9I 30-39 years, male 453.8
GTEX-13N2G-0011-R5a-SM-5MR33 60-69 years, male 451.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 448.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 447.0
GTEX-1RQEC-0011-R5a-SM-F2TBK 60-69 years, male 446.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 446.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 445.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 443.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 441.0
GTEX-ZZPT-0011-R5a-SM-GPRX5 50-59 years, male 440.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 440.6
GTEX-1PPGY-0011-R5a-SM-F33ZV 60-69 years, male 438.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 437.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 434.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 434.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 433.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 433.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 432.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 432.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 431.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 431.3
GTEX-11GS4-0011-R5a-SM-GINAF 60-69 years, male 430.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 430.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 428.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 428.4
GTEX-1A8G7-0011-R5a-SM-H7OH3 60-69 years, male 427.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 426.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 426.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 425.3
GTEX-111FC-0011-R5a-SM-GIN8L 60-69 years, male 424.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 423.6
GTEX-1RQED-0011-R5b-SM-F3K56 60-69 years, male 421.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 418.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 416.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 416.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 415.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 410.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 409.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 409.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 405.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 404.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 400.6
GTEX-1PIIG-0011-R5b-SM-F341S 30-39 years, male 400.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 399.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 396.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 396.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 394.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 393.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 391.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 386.5
GTEX-ZAJG-0011-R5a-SM-GRR1S 50-59 years, female 384.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 384.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 383.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 383.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 380.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 378.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 377.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 373.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 367.4
GTEX-1P4AB-0011-R5a-SM-F3K4I 50-59 years, male 367.2
GTEX-15RJE-0011-R5b-SM-H6Q7T 40-49 years, male 365.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 365.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 364.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 364.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 363.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 362.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 362.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 361.8
GTEX-1QMI2-0011-R5b-SM-F3K4S 60-69 years, male 361.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 361.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 355.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 352.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 351.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 350.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 350.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 349.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 347.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 346.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 346.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 345.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 343.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 343.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 343.4
GTEX-1LSVX-0011-R3a-SM-EXURQ 60-69 years, male 341.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 340.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 338.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 337.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 331.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 329.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 326.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 325.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 323.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 323.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 323.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 320.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 318.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 310.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 308.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 305.3
GTEX-1N2EF-0011-R5a-SM-F3K4Y 60-69 years, male 301.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 300.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 298.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 297.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 295.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 289.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 285.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 284.8
GTEX-WHSE-0011-R5A-SM-3P5ZO 20-29 years, male 281.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 281.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 278.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 275.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 274.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 272.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 269.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 266.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 256.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 250.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 210.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 168.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

176.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 176.2
FF:10164-103B2 76 years, female 176.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

205.3
Pig sample Sample description nTPM
Caudate
nTPM: 205.4
Samples: 4

Max nTPM: 243.2
Min nTPM: 174.7
Sample A Female 185.2
Sample B Female 218.3
Sample C Male 243.2
Sample D Male 174.7

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