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TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
Tissue methods
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Ovarian stroma cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:677.0 nTPM
HPA:486.3 nTPM
GTEx:677.0 nTPM
FANTOM5:106.1 Scaled Tags Per Million
OVARY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA017060
Ovarian stroma cells Medium


OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

486.3
overview
Female, age 64
Ovary sample 192
nTPM: 506.6
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 474.3
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 370.3
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 419.2
N/A
Female, age 16
Ovary sample 3663
nTPM: 664.3
N/A
Female, age 20
Ovary sample 3664
nTPM: 519
N/A
Female, age 32
Ovary sample 3665
nTPM: 450.7

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

677.0
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 677.0
Samples: 193

Max nTPM: 1482.3
Min nTPM: 264.8
Std nTPM: 202.9
Median nTPM: 656.6
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 1482.3
GTEX-13NZ8-2526-SM-H65ZM 60-69 years, female 1269.6
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 1242.1
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 1204.1
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 1155.9
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 1153.4
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 1118.0
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 1047.4
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 1046.0
GTEX-RU72-2226-SM-46MUE 50-59 years, female 1027.1
GTEX-17F9Y-2226-SM-HL9UK 70-79 years, female 1005.1
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 1003.2
GTEX-183WM-1926-SM-72D5F 70-79 years, female 997.9
GTEX-13SLX-2426-SM-664OM 50-59 years, female 989.2
GTEX-ZE7O-2226-SM-GNTC2 50-59 years, female 981.6
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 943.7
GTEX-QVJO-3126-SM-COH22 60-69 years, female 938.8
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 933.5
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 930.0
GTEX-S32W-1226-SM-4AD67 50-59 years, female 929.2
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 923.8
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 918.7
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 917.9
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 917.5
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 910.7
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 902.9
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 900.0
GTEX-1I1CD-2026-SM-GA91R 60-69 years, female 894.1
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 894.1
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 889.9
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 883.1
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 879.5
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 879.0
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 877.9
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 868.1
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 862.0
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 860.7
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 836.9
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 830.2
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 829.4
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 829.2
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 826.1
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 815.3
GTEX-WI4N-2526-SM-4M9QQ 40-49 years, female 810.4
GTEX-11I78-1926-SM-59878 50-59 years, female 801.1
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 796.1
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 793.6
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 790.7
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 787.3
GTEX-16NPV-2326-SM-HL9UF 50-59 years, female 786.8
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 785.8
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 783.3
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 782.7
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 781.8
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 780.0
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 777.4
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 769.4
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 759.7
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 758.5
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 757.4
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 755.6
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 754.1
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 750.0
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 744.2
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 742.5
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 732.3
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 732.0
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 731.8
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 729.0
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 728.2
GTEX-1IE54-2126-SM-GA8ZX 40-49 years, female 728.1
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 728.1
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 727.1
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 725.2
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 719.5
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 718.7
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 717.4
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 715.6
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 714.2
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 713.9
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 709.3
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 709.0
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 707.3
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 703.1
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 701.2
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 696.9
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 686.4
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 682.4
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 682.2
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 680.0
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 678.8
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 676.1
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 669.4
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 659.0
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 658.5
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 656.8
GTEX-1RNTQ-1726-SM-F2I39 20-29 years, female 656.6
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 653.8
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 648.7
GTEX-W5X1-2026-SM-GPRX9 40-49 years, female 641.8
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 640.7
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 640.7
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 632.9
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 629.6
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 624.0
GTEX-18D9A-0826-SM-718C1 30-39 years, female 618.8
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 613.1
GTEX-P78B-1926-SM-3P616 40-49 years, female 611.8
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 609.6
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 606.3
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 605.8
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 605.5
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 600.9
GTEX-Q734-0726-SM-48TZP 40-49 years, female 600.0
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 599.3
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 597.8
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 597.6
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 596.8
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 594.8
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 594.4
GTEX-S341-0726-SM-4AD5R 40-49 years, female 593.9
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 591.7
GTEX-QCQG-1426-SM-48U22 50-59 years, female 588.5
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 587.2
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 585.7
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 584.0
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 578.2
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 575.9
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 575.2
GTEX-ZTPG-1926-SM-HAUZ1 20-29 years, female 575.1
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 570.8
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 563.1
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 557.4
GTEX-14PKV-1226-SM-6871T 20-29 years, female 553.6
GTEX-1NUQO-1726-SM-HK7A8 20-29 years, female 550.7
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 547.0
GTEX-14BIN-1426-SM-664NI 50-59 years, female 545.5
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 544.6
GTEX-15EOM-1526-SM-68723 20-29 years, female 544.2
GTEX-145ME-1226-SM-5MR87 40-49 years, female 542.7
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 541.6
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 538.7
GTEX-15SHU-2726-SM-HAV2W 40-49 years, female 538.4
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 537.2
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 531.0
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 530.8
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 530.7
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 528.1
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 524.6
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 522.7
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 521.7
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 518.4
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 512.0
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 511.7
GTEX-1399S-2126-SM-G8OM9 30-39 years, female 509.2
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 507.6
GTEX-131XW-2726-SM-HL9U9 50-59 years, female 507.1
GTEX-SE5C-0826-SM-HL9T7 40-49 years, female 497.1
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 494.3
GTEX-13X6H-1026-SM-5MR8F 50-59 years, female 493.4
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 490.8
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 489.3
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 489.3
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 489.2
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 483.0
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 482.9
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 477.7
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 469.7
GTEX-14JG6-0626-SM-68716 30-39 years, female 469.1
GTEX-R45C-2526-SM-GRR28 60-69 years, female 468.6
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 468.4
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 466.8
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 462.2
GTEX-1MCYP-1426-SM-F2I3H 20-29 years, female 446.7
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 441.5
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 438.2
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 436.8
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 433.8
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 426.1
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 419.2
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 418.8
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 408.3
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 401.6
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 395.4
GTEX-1R9JW-1226-SM-F2I1P 30-39 years, female 387.7
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 376.1
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 335.6
GTEX-R55G-1526-SM-48FER 40-49 years, female 308.6
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 294.6
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 287.9
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 284.0
GTEX-OHPN-1626-SM-GNTBJ 60-69 years, female 274.4
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 264.8
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OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

106.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 106.1
FF:10020-101D2 47,75,84 years, female 106.1

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