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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expression
Hypothalamusi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Neuronal projections: Not detected
Synapses: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:304.6 nTPM
HPA Brain:550.9 nTPM
GTEx:304.6 nTPM
Pig:757.0 nTPM
Mouse:335.8 nTPM
Allen mouse:23.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Extended tissue profilei

For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.

, antibody HPA042283
Glial cells Not detected
Neuronal cells High
Neuronal projections Not detected
Synapses Not detected

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

550.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 550.9
2226 Male, age 75, left hemisphere 853.7
1961 Female, age 42, unknown 248.1
Dorsomedial nucleus
nTPM: 171.2
2041 Female, age 72, unknown 218.0
2017 Female, age 42, unknown 159.7
1989 Male, age 62, unknown 136.0
Lateral hypothalamic area
nTPM: 300.6
2228 Male, age 66, unknown 481.7
2271 Male, age 75, both hemispheres 255.7
1791 Male, age 80, right hemisphere 245.1
2412 Male, age 62, unknown 220.1
Mammillary body
nTPM: 95.5
1923 Female, age 72, unknown 128.5
2413 Male, age 66, unknown 124.0
1945 Male, age 80, right hemisphere 85.1
1948 Female, age 72, unknown 82.0
1834 Female, age 42, unknown 57.7
Paraventricular nucleus
nTPM: 182.2
2700 Male, age 62, unknown 182.2
Preoptic area
nTPM: 188.9
1907 Male, age 80, right hemisphere 301.4
1861 Female, age 42, unknown 134.7
2414 Female, age 72, unknown 130.6
Supraoptic nucleus
nTPM: 162.8
2835 Female, age 72, unknown 220.5
1894 Female, age 72, unknown 135.5
2043 Male, age 62, unknown 132.5
Ventromedial nucleus
nTPM: 221.7
1982 Female, age 72, unknown 234.6
1822 Female, age 42, unknown 208.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

304.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 304.6
Samples: 257

Max nTPM: 711.5
Min nTPM: 16.2
Std nTPM: 154.5
Median nTPM: 301.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 711.5
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 676.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 646.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 639.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 632.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 623.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 606.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 603.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 603.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 598.0
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 594.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 591.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 585.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 583.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 571.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 570.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 561.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 551.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 547.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 525.4
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 522.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 521.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 517.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 514.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 512.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 506.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 505.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 501.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 501.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 500.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 497.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 495.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 493.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 483.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 483.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 478.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 478.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 476.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 473.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 472.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 471.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 466.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 466.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 465.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 458.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 457.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 456.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 450.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 449.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 442.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 440.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 440.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 438.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 437.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 437.4
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 436.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 431.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 428.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 426.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 421.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 420.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 419.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 413.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 413.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 413.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 412.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 411.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 409.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 408.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 402.7
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 401.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 399.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 398.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 397.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 394.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 390.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 388.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 388.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 386.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 386.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 381.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 381.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 377.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 377.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 375.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 374.0
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 371.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 368.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 368.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 367.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 365.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 364.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 364.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 364.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 363.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 363.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 362.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 361.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 359.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 358.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 357.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 351.0
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 348.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 347.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 344.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 343.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 340.8
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 339.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 339.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 335.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 332.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 329.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 327.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 320.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 315.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 314.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 314.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 314.5
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 310.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 308.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 307.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 307.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 303.6
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 303.5
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 302.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 302.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 301.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 301.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 301.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 300.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 298.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 298.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 297.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 295.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 292.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 291.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 291.1
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 290.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 288.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 282.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 282.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 279.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 276.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 276.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 271.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 271.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 271.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 270.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 269.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 268.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 268.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 265.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 264.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 260.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 258.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 249.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 249.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 248.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 248.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 247.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 246.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 246.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 245.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 245.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 241.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 236.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 232.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 232.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 231.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 231.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 230.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 224.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 223.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 221.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 219.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 215.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 215.1
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 212.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 209.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 207.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 207.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 207.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 205.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 204.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 202.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 196.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 196.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 191.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 189.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 188.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 188.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 187.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 185.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 183.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 177.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 177.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 176.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 174.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 172.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 172.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 165.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 164.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 163.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 163.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 160.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 159.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 156.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 152.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 150.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 150.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 149.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 145.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 142.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 134.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 132.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 129.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 128.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 123.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 121.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 117.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 115.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 114.3
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 111.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 109.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 104.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 104.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 104.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 100.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 100.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 100.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 98.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 97.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 97.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 96.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 93.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 92.8
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 92.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 90.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 86.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 77.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 75.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 75.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 74.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 71.5
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 68.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 66.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 63.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 50.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 42.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 39.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 36.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 35.1
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 33.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 31.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 30.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 16.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 16.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

757.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 757.0
Samples: 4

Max nTPM: 1048.3
Min nTPM: 635.4
Sample A Female 1048.3
Sample B Female 636.5
Sample C Male 635.4
Sample D Male 707.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

335.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 335.8
Samples: 4

Max nTPM: 399.4
Min nTPM: 287.9
Sample A Male 362.8
Sample B Male 399.4
Sample C Female 292.9
Sample D Female 287.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

23.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 23.6
75831782 Antisense, RP_060601_02_F07, Mouse strain C57BL/6J (56 days, male) 23.6

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