PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Medulla oblongatai 		81.478
Mouse brain, Intensity
Ponsi 		101.508
RNA expressioni
HPA Brain:1349.0 nTPM
FANTOM5:2741.9 Scaled Tags Per Million
Pig:539.2 nTPM
Mouse:81.0 nTPM
Allen mouse:16.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

MEDULLA OBLONGATA - Mouse brain profilei , antibody HPA022275
Medulla oblongata mean intensity 81.478
intensityi
FRONT BACK
Nucleus of the solitary tract 42.985
Raphe magnus nucleus 34.356
Cochlear nucleus 14.199
Lateral paragigantocellular nucleus 70.756
Raphe pallidus nucleus 9.132
Facial nucleus 21.400
Hypoglossal nucleus 45.516
Ambiguus nucleus 80.203
External cuneate nucleus 28.572
Inferior olivary nucleus 38.656
Raphe obscures nucleus 23.731
Dorsal motor nucleus of vagus 81.321
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus 38.662
Parabrachial nucleus 37.626
Principle sensory trigeminal nucleus 30.113
Locus coeruleus 84.648
Pontine nucleus 36.012
Vestibular nucleus 38.523
Pontine reticular nucleus, oral 14.131
Lateral lemniscus 18.579
Superior paraolivary nucleus 11.077

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 1349.0
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 719.7
2301 Female, age 85, both hemispheres 788.2
2188 Female, age 91, both hemispheres 763.3
1984 Male, age 76, both hemispheres 747.7
2090 Male, age 80, both hemispheres 579.5
Area postrema
nTPM: 676.0
2799 Male, age 61, both hemispheres 784.4
2054 Male, age 76, both hemispheres 724.1
2306 Male, age 80, both hemispheres 519.5
Dorsal cochlear nucleus
nTPM: 703.0
2187 Female, age 91, both hemispheres 845.2
2802 Male, age 74, right hemisphere 767.2
2058 Male, age 76, both hemispheres 765.1
2370 Male, age 61, both hemispheres 592.7
2378 Male, age 80, both hemispheres 544.8
Dorsal medullary reticular nucleus
nTPM: 826.4
2040 Female, age 85, both hemispheres 1130.0
2088 Male, age 76, both hemispheres 719.5
2373 Male, age 61, both hemispheres 629.6
Dorsal motor vagal complex
nTPM: 811.5
2133 Female, age 91, both hemispheres 1279.9
2000 Male, age 74, unknown 1078.0
2844 Male, age 55, unknown 834.0
2643 Male, age 74, both hemispheres 829.0
2813 Female, age 72, unknown 818.6
2185 Male, age 76, both hemispheres 623.9
2797 Male, age 61, both hemispheres 578.0
2807 Female, age 85, both hemispheres 450.8
Dorsal tegmental nucleus
nTPM: 770.0
2083 Male, age 80, both hemispheres 837.5
2358 Male, age 61, both hemispheres 771.8
2326 Male, age 74, both hemispheres 755.2
1936 Male, age 76, left hemisphere 715.4
Dorsolateral tegmental area
nTPM: 690.5
2751 Female, age 85, both hemispheres 800.7
2654 Male, age 80, both hemispheres 786.8
2141 Male, age 76, both hemispheres 689.4
2360 Male, age 74, both hemispheres 628.8
2337 Male, age 61, both hemispheres 546.8
Gigantocellular reticular nuclei, medullary
nTPM: 795.9
2462 Male, age 74, both hemispheres 1097.6
2314 Male, age 61, both hemispheres 778.6
2310 Male, age 80, both hemispheres 763.7
2022 Male, age 76, right hemisphere 741.9
1876 Female, age 85, both hemispheres 731.3
2387 Female, age 91, both hemispheres 662.5
Gigantocellular reticular nuclei, pars
nTPM: 873.3
2168 Male, age 76, both hemispheres 1180.5
2084 Female, age 85, both hemispheres 912.4
2336 Male, age 61, both hemispheres 852.7
2330 Male, age 80, both hemispheres 723.9
2706 Male, age 80, both hemispheres 697.2
Inferior olive
nTPM: 750.6
2563 Male, age 74, both hemispheres 946.5
2085 Female, age 85, both hemispheres 919.0
2628 Female, age 91, both hemispheres 684.5
2178 Male, age 61, both hemispheres 640.2
2379 Male, age 80, both hemispheres 563.0
Kolliker-Fuse nucleus
nTPM: 875.6
2163 Male, age 80, both hemispheres 1219.0
2793 Female, age 91, left hemisphere 764.8
2315 Male, age 76, right hemisphere 643.0
Lateral lemniscal nuclei
nTPM: 971.7
2169 Male, age 76, both hemispheres 1225.9
2036 Male, age 80, both hemispheres 1010.5
2453 Male, age 74, right hemisphere 970.3
2746 Female, age 85, left hemisphere 949.1
2320 Female, age 91, left hemisphere 702.5
Lateral medullary reticular nucleus
nTPM: 880.5
2044 Male, age 76, both hemispheres 1123.2
2305 Male, age 74, both hemispheres 1086.1
2804 Female, age 91, both hemispheres 855.0
2190 Female, age 85, both hemispheres 786.3
2374 Male, age 61, both hemispheres 778.6
2852 Male, age 80, both hemispheres 653.7
Lateral parabrachial nucleus
nTPM: 784.2
2139 Female, age 85, right hemisphere 1049.5
2790 Male, age 61, both hemispheres 830.1
2013 Male, age 80, both hemispheres 746.2
2792 Male, age 76, both hemispheres 511.1
Lateral vestibular nucleus
nTPM: 997.6
2184 Male, age 76, both hemispheres 1267.4
2311 Male, age 80, both hemispheres 727.8
Locus coeruleus
nTPM: 1349.0
2123 Female, age 91, both hemispheres 1882.1
2014 Male, age 55, unknown 1435.4
2720 Male, age 74, both hemispheres 1429.7
1980 Male, age 76, both hemispheres 1313.2
2788 Male, age 74, unknown 1241.7
2317 Female, age 72, unknown 1122.8
2162 Male, age 80, both hemispheres 1017.8
Medial olivary nucleus
nTPM: 618.8
2851 Male, age 80, both hemispheres 656.4
2138 Female, age 91, both hemispheres 645.8
1962 Male, age 76, both hemispheres 632.2
1943 Male, age 61, both hemispheres 540.6
Medial parabrachial nucleus
nTPM: 851.5
2170 Female, age 91, both hemispheres 970.9
2156 Male, age 61, both hemispheres 924.9
2854 Male, age 80, both hemispheres 876.2
2463 Female, age 85, right hemisphere 758.4
2786 Male, age 76, both hemispheres 727.0
Medial periolivary nuclei
nTPM: 958.4
2171 Female, age 85, both hemispheres 1394.6
2063 Male, age 76, both hemispheres 1251.5
2791 Male, age 74, right hemisphere 867.0
2458 Female, age 91, both hemispheres 661.3
2081 Male, age 80, both hemispheres 617.6
Medial vestibular nucleus
nTPM: 1063.3
2134 Male, age 76, both hemispheres 1357.5
2801 Male, age 74, both hemispheres 1250.3
2624 Male, age 61, both hemispheres 1077.0
2743 Female, age 85, both hemispheres 921.5
2803 Female, age 91, both hemispheres 919.8
2093 Male, age 80, both hemispheres 853.7
Motor facial nucleus
nTPM: 960.2
2062 Male, age 76, both hemispheres 1331.6
2365 Male, age 74, right hemisphere 1033.7
2697 Female, age 85, both hemispheres 956.3
2327 Male, age 80, both hemispheres 896.1
2126 Male, age 61, both hemispheres 799.3
2795 Female, age 91, both hemispheres 744.3
Motor hypoglossal nucleus
nTPM: 1003.5
2461 Male, age 61, both hemispheres 1468.0
2125 Female, age 91, both hemispheres 1105.0
2132 Female, age 85, both hemispheres 982.9
2182 Male, age 80, both hemispheres 797.1
2277 Male, age 76, both hemispheres 664.5
Motor trigeminal nucleus
nTPM: 765.6
2079 Male, age 80, both hemispheres 928.6
2560 Male, age 74, both hemispheres 759.3
2309 Male, age 76, both hemispheres 722.6
2321 Female, age 91, both hemispheres 711.7
2335 Male, age 61, both hemispheres 705.7
Nuclei of the trapezoid body
nTPM: 1119.0
2159 Male, age 61, both hemispheres 1531.9
2735 Female, age 85, both hemispheres 1278.3
1983 Male, age 76, both hemispheres 1212.4
2166 Male, age 80, both hemispheres 851.6
2368 Female, age 91, both hemispheres 720.7
Nucleus ambiguus
nTPM: 775.2
2096 Female, age 85, both hemispheres 895.6
2071 Male, age 76, both hemispheres 654.7
Nucleus cuneatus
nTPM: 704.2
2131 Male, age 76, both hemispheres 999.2
2564 Male, age 74, both hemispheres 925.6
2100 Male, age 76, both hemispheres 852.9
2376 Male, age 61, both hemispheres 694.9
2562 Male, age 61, both hemispheres 612.0
2808 Female, age 85, both hemispheres 600.8
2381 Male, age 80, both hemispheres 587.3
2380 Male, age 80, both hemispheres 533.0
2805 Female, age 91, both hemispheres 532.2
Nucleus gracilis
nTPM: 625.9
2627 Male, age 74, both hemispheres 922.9
2382 Male, age 80, both hemispheres 510.3
2299 Female, age 85, both hemispheres 444.5
Nucleus raphe magnus
nTPM: 1191.0
2160 Male, age 61, both hemispheres 1956.5
2172 Female, age 85, both hemispheres 1425.5
2455 Male, age 74, both hemispheres 1223.8
2328 Male, age 80, both hemispheres 912.3
2051 Male, age 76, both hemispheres 900.7
2459 Female, age 91, both hemispheres 727.0
Nucleus raphe obscurus
nTPM: 748.4
2800 Male, age 61, midline 876.5
2845 Female, age 85, midline 867.6
2142 Male, age 76, midline 501.0
Nucleus raphe pallidus
nTPM: 838.7
2183 Male, age 80, midline 1042.2
1924 Male, age 61, midline 922.1
2145 Male, age 76, midline 551.8
Nucleus tractus solitarii
nTPM: 777.7
2144 Female, age 91, right hemisphere 1228.3
2656 Male, age 76, both hemispheres 689.2
2191 Female, age 85, both hemispheres 649.2
2307 Male, age 80, both hemispheres 543.9
Paramedian reticular nucleus
nTPM: 1004.7
2050 Female, age 85, both hemispheres 1106.1
2057 Male, age 80, both hemispheres 1089.5
2313 Male, age 61, both hemispheres 1039.3
2052 Male, age 76, both hemispheres 783.7
Parvicellular reticular nuclei
nTPM: 913.3
2119 Male, age 80, both hemispheres 1054.0
2095 Male, age 76, both hemispheres 884.2
2558 Male, age 74, both hemispheres 801.7
Parvicellular reticular nuclei, medullary
nTPM: 977.8
2189 Female, age 91, both hemispheres 1116.9
2091 Female, age 85, both hemispheres 1050.2
2181 Male, age 80, left hemisphere 766.4
Pedunculopontine tegmental nucleus
nTPM: 808.9
2334 Male, age 80, both hemispheres 873.1
2338 Male, age 61, both hemispheres 815.9
1921 Female, age 85, both hemispheres 737.9
Peritrigeminal nucleus
nTPM: 1024.8
2179 Male, age 61, both hemispheres 1159.3
2136 Male, age 76, both hemispheres 960.1
2067 Female, age 85, both hemispheres 954.8
Pontine nuclei
nTPM: 1185.2
2727 Male, age 61, right hemisphere 1834.3
1863 Male, age 55, unknown 1667.7
2109 Female, age 72, unknown 1343.6
2787 Female, age 85, both hemispheres 1319.7
1968 Male, age 76, left hemisphere 1123.2
2454 Male, age 74, left hemisphere 884.0
2319 Female, age 91, both hemispheres 667.8
2115 Male, age 80, left hemisphere 641.1
Pontine raphe nucleus
nTPM: 1013.7
2122 Female, age 85, midline 1148.1
2853 Male, age 76, midline 879.3
Posteroventral cochlear nucleus
nTPM: 702.0
2070 Male, age 76, both hemispheres 913.0
2752 Female, age 85, both hemispheres 886.5
2371 Male, age 61, both hemispheres 598.6
2341 Male, age 80, both hemispheres 579.8
2135 Female, age 91, both hemispheres 532.1
Prepositus hypoglossal nucleus
nTPM: 871.9
2855 Female, age 85, right hemisphere 1011.2
2086 Male, age 80, both hemispheres 732.6
Principal sensory trigeminal nucleus
nTPM: 1114.4
2158 Male, age 61, both hemispheres 1638.9
2324 Male, age 76, both hemispheres 1072.6
2008 Male, age 80, left hemisphere 1020.8
2367 Female, age 91, left hemisphere 725.2
Reticular pontine nucleus, caudal
nTPM: 839.5
2332 Male, age 80, right hemisphere 978.8
2092 Male, age 76, both hemispheres 918.8
2559 Male, age 74, both hemispheres 755.0
2457 Female, age 91, both hemispheres 705.5
Reticular pontine nucleus, oral
nTPM: 871.1
2361 Male, age 74, both hemispheres 1006.6
2012 Female, age 85, both hemispheres 1004.3
1939 Male, age 80, both hemispheres 887.7
2167 Male, age 76, both hemispheres 775.4
2366 Female, age 91, both hemispheres 681.4
Reticulotegmental nucleus
nTPM: 887.4
2325 Male, age 76, both hemispheres 1022.7
2452 Male, age 74, both hemispheres 930.5
2322 Female, age 91, both hemispheres 833.5
2333 Male, age 80, both hemispheres 762.9
Spinal trigeminal nucleus, caudal
nTPM: 956.2
2390 Female, age 91, both hemispheres 1714.9
2447 Male, age 76, both hemispheres 997.7
2642 Male, age 74, both hemispheres 779.9
2308 Male, age 80, both hemispheres 681.4
2312 Male, age 61, both hemispheres 606.9
Spinal trigeminal nucleus, interpolar
nTPM: 1251.2
2625 Male, age 61, both hemispheres 2120.3
2066 Male, age 76, right hemisphere 1595.9
2389 Female, age 91, both hemispheres 931.3
2033 Male, age 80, both hemispheres 889.4
2386 Female, age 85, both hemispheres 719.1
Spinal trigeminal nucleus, oral
nTPM: 896.4
2164 Male, age 80, both hemispheres 1088.0
2737 Female, age 85, both hemispheres 926.8
1978 Male, age 76, both hemispheres 674.5
Spinal vestibular nucleus
nTPM: 853.7
2186 Female, age 91, both hemispheres 935.9
2748 Male, age 76, both hemispheres 898.4
2780 Male, age 80, both hemispheres 896.7
2384 Male, age 74, both hemispheres 832.3
2806 Female, age 85, both hemispheres 791.1
2796 Male, age 61, both hemispheres 767.8
Subcoeruleus area
nTPM: 835.4
2323 Female, age 91, left hemisphere 954.5
1958 Male, age 80, both hemispheres 942.4
2089 Male, age 76, left hemisphere 876.7
2451 Male, age 74, both hemispheres 738.0
2369 Female, age 85, left hemisphere 665.5
Superior olive
nTPM: 912.9
1875 Female, age 85, both hemispheres 1207.4
2364 Male, age 74, right hemisphere 947.5
2020 Male, age 76, both hemispheres 867.1
2329 Male, age 80, right hemisphere 837.8
2561 Female, age 91, both hemispheres 704.7
Superior vestibular nucleus
nTPM: 785.2
2015 Male, age 80, both hemispheres 873.7
2383 Male, age 74, both hemispheres 751.6
2061 Male, age 76, both hemispheres 730.4
Ventral medullary reticular nucleus
nTPM: 750.0
2060 Male, age 76, both hemispheres 779.7
2372 Male, age 61, both hemispheres 720.4
Ventral periolivary nuclei
nTPM: 981.2
2130 Female, age 85, both hemispheres 1234.9
2165 Male, age 80, both hemispheres 1132.7
2023 Male, age 76, both hemispheres 820.4
2794 Female, age 91, left hemisphere 737.0
Ventrolateral medulla, A1-C1 cell groups
nTPM: 886.8
2741 Female, age 85, both hemispheres 1087.7
1986 Male, age 76, both hemispheres 1035.5
2180 Male, age 61, both hemispheres 866.7
2302 Female, age 91, both hemispheres 774.9
2118 Male, age 80, both hemispheres 669.1
Ventrolateral tegmental area, A5 NE cell group
nTPM: 873.2
2449 Male, age 74, both hemispheres 1041.4
2840 Female, age 85, both hemispheres 996.1
1959 Male, age 76, both hemispheres 913.9
2359 Male, age 61, both hemispheres 871.1
2161 Male, age 80, both hemispheres 829.5
2456 Female, age 91, both hemispheres 587.2

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 2741.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 1259.8
FF:10182-103D2 60 years, female 1698.9
FF:10165-103B3 76 years, female 820.7
Medulla oblongata
Scaled Tags Per Million: 837.5
FF:10038-101F2 18-64 years, mixed 1248.9
FF:10174-103C3 60 years, female 687.5
FF:10155-103A2 76 years, female 576.1
Pons
Scaled Tags Per Million: 2741.9
FF:10033-101E6 18-54 years, mixed 2741.9

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 539.2
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 455.4
Samples: 4

Max nTPM: 548.8
Min nTPM: 304.0
Sample A Female 548.8
Sample B Female 463.3
Sample C Male 505.3
Sample D Male 304.0
Pons
nTPM: 539.2
Samples: 4

Max nTPM: 665.1
Min nTPM: 440.2
Sample A Female 665.1
Sample B Female 440.2
Sample C Male 524.4
Sample D Male 527.1

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 81.0
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 81.0
Samples: 4

Max nTPM: 91.6
Min nTPM: 67.4
Sample A Male 91.6
Sample B Male 85.0
Sample C Female 67.4
Sample D Female 80.0

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 16.4
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 16.4
71570737 Antisense, RP_050505_01_H06, Mouse strain C57BL/6J (56 days, male) 17.4
73834355 Antisense, RP_051212_03_G08, Mouse strain C57BL/6J (56 days, male) 15.5
Pons
Expression energy: 16.3
71570737 Antisense, RP_050505_01_H06, Mouse strain C57BL/6J (56 days, male) 17.3
73834355 Antisense, RP_051212_03_G08, Mouse strain C57BL/6J (56 days, male) 15.4

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