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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
254.3
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 161.2
2586
Male, age 75, left hemisphere
310.1
1827
Male, age 72, unknown
191.2
2828
Female, age 72, unknown
177.9
1833
Male, age 53, unknown
173.1
2666
Male, age 74, left hemisphere
153.1
1870
Female, age 42, unknown
141.7
2219
Male, age 76, both hemispheres
127.5
2411
Female, age 72, unknown
122.8
1830
Male, age 51, unknown
120.8
2019
Male, age 18, unknown
93.4
Dorsal raphe nucleus nTPM: 181.5
1828
Male, age 53, unknown
242.2
2016
Female, age 72, unknown
224.7
2047
Male, age 72, unknown
203.2
2298
Female, age 72, unknown
151.6
2750
Male, age 76, both hemispheres
85.9
Inferior colliculus nTPM: 254.3
1848
Female, age 42, unknown
340.0
2849
Male, age 72, unknown
297.9
1890
Male, age 53, unknown
201.1
2097
Female, age 72, unknown
178.0
Median raphe nucleus nTPM: 68.3
2220
Male, age 76, midline
68.3
Periaquaductal grey, anterior nTPM: 185.0
2502
Female, age 75, unknown
206.8
1947
Male, age 18, unknown
177.7
1795
Male, age 51, unknown
170.6
Periaquaductal grey, dorsal nTPM: 194.3
1840
Male, age 53, unknown
291.8
2464
Female, age 72, unknown
226.1
2850
Male, age 76, both hemispheres
142.2
1831
Male, age 72, unknown
117.0
Periaquaductal grey, lateral nTPM: 157.1
2053
Male, age 18, unknown
197.8
2140
Male, age 76, both hemispheres
173.7
2272
Male, age 74, both hemispheres
99.8
Pretectal area nTPM: 179.5
1944
Female, age 72, unknown
225.0
1816
Male, age 51, unknown
224.0
1817
Female, age 42, unknown
214.1
2224
Female, age 72, unknown
212.6
2667
Female, age 75, unknown
208.6
2825
Male, age 18, unknown
207.4
1815
Male, age 53, unknown
154.2
2316
Male, age 76, right hemisphere
151.4
2007
Male, age 72, unknown
147.8
2273
Male, age 74, both hemispheres
117.1
2407
Male, age 75, both hemispheres
112.5
Red nucleus nTPM: 158.2
1821
Female, age 72, unknown
203.5
2769
Male, age 72, unknown
202.1
2227
Male, age 72, unknown
200.9
2588
Male, age 74, left hemisphere
200.2
2503
Female, age 72, unknown
194.8
1954
Female, age 42, unknown
187.4
1904
Male, age 53, unknown
147.8
2823
Male, age 76, right hemisphere
147.6
1865
Male, age 51, unknown
125.0
2725
Female, age 75, unknown
123.9
2785
Male, age 18, unknown
85.5
2584
Male, age 75, left hemisphere
80.1
Substantia nigra nTPM: 200.3
1916
Female, age 42, unknown
297.0
2699
Male, age 18, unknown
290.7
2665
Male, age 74, both hemispheres
237.6
1889
Female, age 72, unknown
201.9
2241
Male, age 72, unknown
196.4
1851
Male, age 51, unknown
193.3
2409
Female, age 72, unknown
184.6
2590
Female, age 75, unknown
155.4
2583
Male, age 75, right hemisphere
145.0
1941
Male, age 53, unknown
101.4
Superior colliculus nTPM: 167.9
2664
Male, age 75, both hemispheres
233.3
1839
Male, age 51, unknown
207.2
2261
Male, age 18, unknown
200.3
2087
Female, age 72, unknown
197.0
1796
Male, age 53, unknown
181.7
2668
Female, age 75, unknown
177.5
1895
Male, age 76, right hemisphere
162.5
2587
Male, age 74, left hemisphere
160.9
1995
Male, age 72, unknown
87.9
1913
Female, age 42, unknown
70.9
Ventral tegmental area nTPM: 129.1
2410
Female, age 72, unknown
192.9
1915
Female, age 42, unknown
186.1
1942
Male, age 51, unknown
116.9
2218
Male, age 76, both hemispheres
113.9
2021
Male, age 53, unknown
107.9
2223
Female, age 72, unknown
57.1
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
77.7
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 77.7
Samples: 183
Max nTPM: 381.6
Min nTPM: 0.7
Std nTPM: 68.2
Median nTPM: 59.3
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
381.6
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
298.2
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
279.9
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
277.0
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
252.2
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
245.0
GTEX-1O9I2-0011-R2b-SM-F3K53
50-59 years, male
230.8
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
224.4
GTEX-1117F-0011-R2b-SM-GI4VL
60-69 years, female
211.5
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
211.4
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
209.5
GTEX-11TTK-0011-R2b-SM-GJ3PU
60-69 years, female
208.6
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
199.6
GTEX-1192X-0011-R2b-SM-GI4VV
50-59 years, male
193.7
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
185.9
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
181.7
GTEX-1R9PO-0011-R2a-SM-F2TBH
60-69 years, female
179.8
GTEX-1KWVE-0011-R2a-SM-G8OLX
30-39 years, male
178.3
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
177.6
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
173.6
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
172.1
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
168.3
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
165.3
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
165.2
GTEX-13OW7-0011-R2b-SM-H6Q8E
50-59 years, male
157.7
GTEX-1RQEC-0011-R2b-SM-EY5ZT
60-69 years, male
152.3
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
151.5
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
151.4
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
145.5
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
139.1
GTEX-15SHU-0011-R2a-SM-GPRXS
40-49 years, female
134.8
GTEX-1IDJH-0011-R2a-SM-GPI9D
70-79 years, male
133.2
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
130.4
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
128.4
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
125.9
GTEX-1KD4Q-0011-R2a-SM-F649I
40-49 years, male
122.2
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
118.0
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
116.0
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
115.0
GTEX-1QMI2-0011-R2b-SM-F648R
60-69 years, male
114.7
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
113.7
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
113.6
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
112.8
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
111.8
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
111.8
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
111.2
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
111.0
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
109.2
GTEX-1JMPZ-0011-R2a-SM-G8LLS
30-39 years, male
107.8
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
104.9
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
104.6
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
103.8
GTEX-11NUK-0011-R2a-SM-GINAO
50-59 years, male
102.4
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
102.2
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
101.7
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
101.0
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
97.5
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
95.9
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
93.9
GTEX-1N2EE-0011-R2a-SM-F649F
60-69 years, male
93.2
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
93.0
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
92.3
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
90.6
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
88.6
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
86.6
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
86.5
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
86.5
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
86.4
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
85.1
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
85.0
GTEX-1N2EF-0011-R2b-SM-F6482
60-69 years, male
84.8
GTEX-1MCQQ-0011-R2a-SM-F649V
60-69 years, male
81.1
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
79.6
GTEX-1I19N-0011-R2b-SM-GPRYG
70-79 years, male
78.1
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
75.8
GTEX-1PPGY-0011-R2b-SM-F33YW
60-69 years, male
75.0
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
69.8
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
67.3
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
66.5
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
66.5
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
66.3
GTEX-1LG7Y-0011-R2b-SM-G8LMM
50-59 years, male
66.0
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
65.8
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
65.5
GTEX-1PWST-0011-R2b-SM-F3K5I
70-79 years, male
62.4
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
61.9
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
61.8
GTEX-111FC-0011-R2a-SM-GIN8S
60-69 years, male
61.7
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
60.8
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
60.6
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
59.8
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
59.3
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
58.4
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
57.8
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
57.6
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
56.8
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
55.8
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
55.7
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
55.6
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
53.1
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
52.8
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
52.1
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
49.1
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
48.3
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
47.3
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
47.1
GTEX-1JJ6O-0011-R2a-SM-EY5ZO
60-69 years, male
46.9
GTEX-1NV5F-0011-R2a-SM-G8LME
60-69 years, female
46.5
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
46.4
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
46.3
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
44.5
GTEX-13OVL-0011-R2b-SM-H65ZN
50-59 years, male
40.9
GTEX-1HBPH-0011-R2a-SM-GQ1DS
40-49 years, female
40.2
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
39.4
GTEX-117XS-0011-R2b-SM-GI4VT
60-69 years, male
38.7
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
37.9
GTEX-1RQED-0011-R2a-SM-F3K5T
60-69 years, male
37.9
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
37.6
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
37.5
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
35.7
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
35.7
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
35.5
GTEX-1POEN-0011-R2b-SM-G8LLP
30-39 years, female
34.9
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
34.3
GTEX-1NV8Z-0011-R2b-SM-F648N
60-69 years, male
34.2
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
33.7
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
33.5
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
33.5
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
31.3
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
31.3
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
31.2
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
30.0
GTEX-ZYY3-0011-R2a-SM-GNTB2
60-69 years, female
27.6
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
26.9
GTEX-ZAJG-0011-R2a-SM-GNTAX
50-59 years, female
26.0
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
25.8
GTEX-1PIIG-0011-R2b-SM-F648W
30-39 years, male
25.5
GTEX-12696-0011-R2b-SM-GHWPY
60-69 years, male
24.8
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
24.6
GTEX-1P4AB-0011-R2a-SM-F649K
50-59 years, male
23.4
GTEX-1LSVX-0011-R2a-SM-G8OL9
60-69 years, male
23.1
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
22.8
GTEX-1JN1M-0011-R2b-SM-G9EPE
60-69 years, female
22.5
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
22.4
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
22.3
GTEX-1CB4J-0011-R2a-SM-9WG5N
60-69 years, male
20.9
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
20.5
GTEX-1MJK2-0011-R2b-SM-EXUS5
50-59 years, male
19.4
GTEX-1RDX4-0011-R2b-SM-F649Z
50-59 years, female
18.1
GTEX-ZZPT-0011-R2a-SM-GNTB1
50-59 years, male
18.0
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
17.4
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
17.1
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
15.9
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
15.9
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
15.8
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
15.5
GTEX-ZAK1-0011-R2a-SM-GPRX1
50-59 years, female
15.5
GTEX-1JMQJ-0011-R2a-SM-F6493
50-59 years, male
13.5
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
13.0
GTEX-16GPK-0011-R2a-SM-GRR1F
60-69 years, male
12.5
GTEX-1R9K4-0011-R2b-SM-G8LLF
60-69 years, male
12.5
GTEX-15G19-0011-R2b-SM-H6Q7S
60-69 years, male
10.3
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
9.9
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
9.7
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
9.5
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
9.2
GTEX-1KD5A-0011-R2b-SM-G9EPP
50-59 years, male
9.0
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
7.9
GTEX-X4EP-0011-R2B-SM-3P625
60-69 years, female
7.8
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
7.7
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
7.5
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
7.0
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
6.9
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
5.4
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
5.0
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
4.5
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
4.4
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
4.4
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
3.4
GTEX-1LKK1-0011-R2b-SM-G8OLT
50-59 years, female
2.9
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
1.4
GTEX-1N5O9-0011-R2a-SM-G8LM1
60-69 years, male
0.9
GTEX-RN5K-0011-R2A-SM-GQ1CA
50-59 years, female
0.7
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
226.0
Pig sample
Sample description
nTPM
Substantia nigra nTPM: 170.9
Samples: 4
Max nTPM: 205.4
Min nTPM: 129.9
Sample A
Female
178.5
Sample B
Female
129.9
Sample C
Male
205.4
Sample D
Male
169.7
Midbrain nTPM: 176.3
Samples: 4
Max nTPM: 231.8
Min nTPM: 30.2
Sample A
Female
30.2
Sample B
Female
231.8
Sample C
Male
216.8
Sample D
Male
226.2
Periaqueductal gray nTPM: 226.0
Samples: 3
Max nTPM: 263.4
Min nTPM: 189.9
Sample B
Female
263.4
Sample C
Male
224.6
Sample D
Male
189.9
Superior colliculi nTPM: 165.3
Samples: 4
Max nTPM: 211.0
Min nTPM: 75.8
Sample A
Female
211.0
Sample B
Female
75.8
Sample C
Male
178.0
Sample D
Male
196.4
MIDBRAIN - Mouse RNA-seqi
RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
461.5
Mouse sample
Sample description
nTPM
Midbrain nTPM: 461.5
Samples: 4
Max nTPM: 477.1
Min nTPM: 446.1
Sample A
Male
477.1
Sample B
Male
456.1
Sample C
Female
446.1
Sample D
Female
466.5
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.