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  • SUMMARY

  • TISSUE

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  • MTSS2
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:222.1 nTPM
HPA Brain:698.3 nTPM
GTEx:222.1 nTPM
Pig:153.4 nTPM
Mouse:96.5 nTPM
Allen mouse:8.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

698.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 372.6
1961 Female, age 42, unknown 432.1
2226 Male, age 75, left hemisphere 313.2
Dorsomedial nucleus
nTPM: 486.3
1989 Male, age 62, unknown 548.6
2017 Female, age 42, unknown 476.3
2041 Female, age 72, unknown 433.9
Lateral hypothalamic area
nTPM: 454.3
2412 Male, age 62, unknown 527.5
2271 Male, age 75, both hemispheres 511.3
1791 Male, age 80, right hemisphere 509.7
2228 Male, age 66, unknown 268.6
Mammillary body
nTPM: 428.0
1834 Female, age 42, unknown 515.2
2413 Male, age 66, unknown 442.8
1945 Male, age 80, right hemisphere 439.3
1948 Female, age 72, unknown 394.9
1923 Female, age 72, unknown 347.9
Paraventricular nucleus
nTPM: 489.9
2700 Male, age 62, unknown 489.9
Preoptic area
nTPM: 437.1
1861 Female, age 42, unknown 543.1
2414 Female, age 72, unknown 458.7
1907 Male, age 80, right hemisphere 309.6
Supraoptic nucleus
nTPM: 698.3
2043 Male, age 62, unknown 761.0
1894 Female, age 72, unknown 707.8
2835 Female, age 72, unknown 626.0
Ventromedial nucleus
nTPM: 444.7
1822 Female, age 42, unknown 446.0
1982 Female, age 72, unknown 443.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

222.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 222.1
Samples: 257

Max nTPM: 715.7
Min nTPM: 53.9
Std nTPM: 99.7
Median nTPM: 202.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 715.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 660.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 544.4
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 534.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 527.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 521.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 492.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 464.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 450.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 435.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 410.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 408.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 402.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 400.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 393.6
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 391.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 382.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 378.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 375.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 372.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 357.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 356.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 355.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 349.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 348.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 347.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 346.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 345.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 345.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 339.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 338.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 338.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 337.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 334.4
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 334.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 330.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 329.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 328.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 321.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 318.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 315.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 308.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 305.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 304.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 302.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 300.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 296.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 289.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 288.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 287.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 281.9
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 280.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 280.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 280.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 275.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 275.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 273.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 273.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 272.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 270.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 269.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 269.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 268.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 266.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 263.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 263.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 263.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 262.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 262.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 259.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 257.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 254.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 254.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 252.9
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 251.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 248.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 248.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 248.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 247.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 246.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 246.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 245.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 241.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 239.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 238.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 237.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 237.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 237.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 235.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 235.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 233.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 233.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 232.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 230.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 229.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 226.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 226.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 226.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 224.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 221.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 220.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 220.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 220.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 219.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 218.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 218.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 217.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 217.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 215.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 215.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 215.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 214.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 212.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 212.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 211.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 210.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 210.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 208.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 207.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 207.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 207.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 206.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 205.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 205.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 204.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 204.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 204.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 203.8
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 202.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 201.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 200.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 199.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 199.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 199.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 199.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 199.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 197.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 197.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 196.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 196.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 195.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 193.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 193.5
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 192.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 192.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 192.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 191.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 188.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 187.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 186.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 185.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 185.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 185.0
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 185.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 183.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 182.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 182.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 182.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 181.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 181.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 181.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 181.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 180.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 180.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 177.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 176.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 176.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 171.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 171.9
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 171.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 169.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 168.4
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 167.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 165.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 165.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 164.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 164.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 163.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 163.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 162.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 162.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 162.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 161.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 160.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 160.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 159.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 159.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 157.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 156.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 156.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 156.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 156.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 155.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 155.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 154.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 153.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 153.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 151.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 151.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 150.6
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 150.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 149.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 148.7
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 148.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 146.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 144.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 144.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 144.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 143.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 143.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 143.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 143.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 142.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 141.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 139.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 139.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 138.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 137.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 135.3
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 133.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 131.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 130.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 130.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 127.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 127.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 126.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 126.8
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 125.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 124.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 121.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 120.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 119.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 117.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 115.8
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 115.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 114.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 113.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 113.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 111.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 111.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 110.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 105.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 103.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 103.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 100.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 99.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 95.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 93.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 92.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 89.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 89.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 82.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 75.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 69.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 65.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 57.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 53.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

153.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 153.4
Samples: 4

Max nTPM: 182.3
Min nTPM: 127.2
Sample A Female 182.3
Sample B Female 157.7
Sample C Male 146.2
Sample D Male 127.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

96.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 96.5
Samples: 4

Max nTPM: 107.4
Min nTPM: 82.4
Sample A Male 101.4
Sample B Male 107.4
Sample C Female 82.4
Sample D Female 94.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

8.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 8.6
77332715 Antisense, RP_070116_02_B11, Mouse strain C57BL/6J (56 days, male) 8.7
69816494 Antisense, RP_050510_01_C01, Mouse strain C57BL/6J (56 days, male) 8.6

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