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  • TISSUE

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  • SNAP25
TISSUE PRIMARY DATA HIPPOCAMPUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Hippocampus
Tissue proteome
Tissue methods
HIPPOCAMPUS - Expression summary
Protein expression
Hippocampusi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Mouse brain, Intensity
Hippocampal formationi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

53.374
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:844.0 nTPM
GTEx:896.2 nTPM
FANTOM5:1703.8 Scaled Tags Per Million
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HIPPOCAMPUS - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA001830Antibody HPA071013Antibody CAB000360
Glial cells LowNot detectedNot detected
Neuronal cells MediumNot detectedNot detected







HIPPOCAMPAL FORMATION - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA001830
Hippocampal formation mean intensity 53.374
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Polymorph layer of the dentate gyrus 4.936
Molecular layer of the dentate gyrus 31.861
Granular dentate gyrus 1.105
CA1 - oriens layer 39.657
CA1 - pyramidal layer 11.590
CA1 - radiatum layer 39.047
CA2 - oriens layer 36.576
CA2 - pyramidal layer 24.831
CA2 - radiatum layer 43.587
CA3 - oriens layer 29.029
CA3 - pyramidal layer 3.792
CA3 - radiatum layer 23.670
Stratum lucidum 29.082
Lacunosum moleculare 53.374
Subiculum 28.234

HIPPOCAMPUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

844.0
Sample id Sample description nTPM
Hippocampus
nTPM: 844.0
1898 Male, age 80, left hemisphere 1286.3
2621 Female, age 67, right hemisphere 1077.3
2148 Female, age 91, left hemisphere 845.1
1855 Male, age 76, left hemisphere 814.4
1911 Female, age 85, right hemisphere 649.3
2529 Female, age 94, left hemisphere 391.8

HIPPOCAMPUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

896.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 896.2
Samples: 255

Max nTPM: 2897.3
Min nTPM: 41.3
Std nTPM: 635.3
Median nTPM: 827.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2897.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 2880.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 2698.7
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 2391.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 2382.4
GTEX-11H98-0011-R1a-SM-GIN8O 50-59 years, male 2228.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 2215.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 2145.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 2141.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 2116.3
GTEX-1JMQJ-0011-R1b-SM-F2T9P 50-59 years, male 2094.2
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 2072.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 2070.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 2063.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 2038.7
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 2032.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 2030.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 1962.2
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 1944.1
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 1917.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 1914.3
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 1861.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 1856.2
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 1854.9
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 1849.7
GTEX-1LH75-0011-R1a-SM-F341Y 50-59 years, female 1849.2
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 1847.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 1797.0
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 1787.0
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 1747.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 1719.4
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 1717.2
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 1683.0
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 1679.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1678.2
GTEX-15SHU-0011-R1b-SM-H6Q7U 40-49 years, female 1677.0
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 1670.8
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 1650.8
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 1646.4
GTEX-1N2EF-0011-R1a-SM-F2TAT 60-69 years, male 1641.4
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 1617.0
GTEX-1O9I2-0011-R1a-SM-F2TAW 50-59 years, male 1567.1
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 1564.7
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 1550.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 1532.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 1531.1
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 1492.6
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 1491.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 1473.1
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 1468.7
GTEX-13SLX-0011-R1a-SM-H6Q8N 50-59 years, female 1436.0
GTEX-11DXY-0011-R1b-SM-GI4VQ 60-69 years, male 1419.1
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 1415.1
GTEX-1N2EE-0011-R1a-SM-F3K5K 60-69 years, male 1411.1
GTEX-11NV4-0011-R1a-SM-GINAK 60-69 years, male 1408.1
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 1404.0
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 1401.2
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 1372.7
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 1371.9
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 1365.9
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 1360.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 1346.0
GTEX-117XS-0011-R1b-SM-GJ3PQ 60-69 years, male 1345.2
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 1328.8
GTEX-11OF3-0011-R1b-SM-H65ZT 60-69 years, male 1320.7
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 1313.8
GTEX-1POEN-0011-R1b-SM-F3K3K 30-39 years, female 1291.1
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 1287.6
GTEX-15RJE-0011-R1b-SM-H6Q7N 40-49 years, male 1282.9
GTEX-15DYW-0011-R1a-SM-H6Q6Q 60-69 years, female 1281.0
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 1263.7
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 1258.4
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 1258.2
GTEX-1192X-0011-R1b-SM-GI4VU 50-59 years, male 1248.8
GTEX-N7MT-0011-R1a-SM-CNPO1 60-69 years, female 1238.2
GTEX-12WSA-0011-R1b-SM-GI4VI 60-69 years, male 1236.5
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 1201.3
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 1193.4
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 1145.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1143.9
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 1133.7
GTEX-1RQEC-0011-R1b-SM-F2I2E 60-69 years, male 1123.1
GTEX-15EO6-0011-R1b-SM-H7OGP 50-59 years, male 1120.5
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 1114.7
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 1105.7
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 1087.4
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 1087.0
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 1086.1
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 1079.2
GTEX-1P4AB-0011-R1b-SM-F2TAV 50-59 years, male 1075.2
GTEX-13VXU-0011-R1a-SM-GINAT 50-59 years, male 1045.2
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 1039.7
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 1038.8
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 1029.7
GTEX-1I19N-0011-R1b-SM-GOR1A 70-79 years, male 1029.0
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 1027.1
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 1017.9
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 1015.4
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 1011.9
GTEX-RU72-0011-R1A-SM-HAUZG 50-59 years, female 1005.2
GTEX-1MJK2-0011-R1b-SM-F649H 50-59 years, male 989.9
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 985.9
GTEX-12ZZZ-0011-R1a-SM-GIN8I 60-69 years, male 983.4
GTEX-15DCD-0011-R1b-SM-6LPIJ 70-79 years, female 975.9
GTEX-1KD4Q-0011-R1a-SM-F3K4Z 40-49 years, male 975.3
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 971.0
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 954.3
GTEX-11PRG-0011-R1b-SM-H7OHD 50-59 years, male 950.6
GTEX-12ZZY-0011-R1a-SM-GIN9E 60-69 years, male 949.6
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 948.3
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 935.0
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 926.8
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 926.3
GTEX-1QP6S-0011-R1b-SM-F3K59 40-49 years, male 919.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 916.8
GTEX-1C6VR-0011-R1a-SM-7MXUE 60-69 years, male 905.2
GTEX-1PIIG-0011-R1a-SM-F649P 30-39 years, male 900.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 899.3
GTEX-ZAK1-0011-R1a-SM-GRR1R 50-59 years, female 894.5
GTEX-14BMV-0011-R1b-SM-G9ERL 50-59 years, male 892.6
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 892.5
GTEX-ZZPT-0011-R1b-SM-GNINL 50-59 years, male 886.1
GTEX-1JMOU-0011-R1b-SM-F341B 60-69 years, female 874.6
GTEX-11DYG-0011-R1a-SM-GI4X6 60-69 years, male 862.8
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 857.3
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 836.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 828.2
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 827.1
GTEX-1MCQQ-0011-R1a-SM-F341G 60-69 years, male 826.6
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 822.7
GTEX-1MA7X-0011-R1b-SM-F2TAB 60-69 years, male 809.0
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 806.4
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 804.0
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 798.3
GTEX-1LVAO-0011-R1a-SM-F649O 60-69 years, male 793.4
GTEX-15CHQ-0011-R1a-SM-COH27 60-69 years, male 771.8
GTEX-1PWST-0011-R1b-SM-F2I38 70-79 years, male 744.5
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 743.3
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 742.8
GTEX-ZUA1-0011-R1a-SM-4YCE2 40-49 years, male 733.8
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 726.0
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 716.0
GTEX-1JMPZ-0011-R1b-SM-F6497 30-39 years, male 712.4
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 699.6
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 685.4
GTEX-1EKGG-0011-R1b-SM-9QEI1 60-69 years, male 680.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 678.6
GTEX-1JJEA-0011-R1b-SM-F6495 60-69 years, male 677.2
GTEX-14PJM-0011-R1a-SM-CNPO3 50-59 years, female 664.6
GTEX-1PPGY-0011-R1b-SM-G8LN3 60-69 years, male 651.3
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 646.1
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 641.0
GTEX-14JFF-0011-R1b-SM-G8W88 60-69 years, male 626.5
GTEX-1R9PO-0011-R1b-SM-F2I2G 60-69 years, female 620.4
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 611.9
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 609.3
GTEX-1OJC4-0011-R1a-SM-F2TAZ 50-59 years, female 598.5
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 577.1
GTEX-1QMI2-0011-R1b-SM-F3K5Q 60-69 years, male 575.3
GTEX-1KWVE-0011-R1a-SM-F649B 30-39 years, male 564.0
GTEX-1JMQK-0011-R1a-SM-F6484 60-69 years, male 562.5
GTEX-1I1GQ-0011-R1a-SM-CY8GG 50-59 years, male 556.1
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 549.7
GTEX-1RDX4-0011-R1a-SM-F3K5H 50-59 years, female 548.6
GTEX-145LS-0011-R1b-SM-5PNUP 60-69 years, female 536.4
GTEX-1JMLX-0011-R1b-SM-G9ERV 50-59 years, male 522.5
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 522.3
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 515.2
GTEX-1LVA9-0011-R1b-SM-F2TB5 50-59 years, male 493.0
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 481.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 473.2
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 473.1
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 468.5
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 445.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 445.4
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 437.6
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 431.5
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 424.0
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 423.3
GTEX-1RQED-0011-R1a-SM-F3K5W 60-69 years, male 420.7
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 413.3
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 399.0
GTEX-1F52S-0011-R1a-SM-9OSX9 60-69 years, female 387.3
GTEX-13PVQ-0011-R1b-SM-GJ3RQ 50-59 years, male 372.7
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 372.6
GTEX-ZYY3-0011-R1b-SM-GPI92 60-69 years, female 372.2
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 360.0
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 358.7
GTEX-1LSVX-0011-R1a-SM-F3K5F 60-69 years, male 343.8
GTEX-1RNSC-0011-R1b-SM-F342D 60-69 years, male 338.6
GTEX-1NV8Z-0011-R1b-SM-F647K 60-69 years, male 333.1
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 326.7
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 320.0
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 319.3
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 317.9
GTEX-1LSNL-0011-R1a-SM-F3K51 50-59 years, male 313.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 308.4
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 303.6
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 302.2
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 302.0
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 297.0
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 296.5
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 283.6
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 282.9
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 276.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 271.7
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 270.6
GTEX-ZYFD-0011-R1b-SM-GRR1T 50-59 years, male 263.1
GTEX-14DAQ-0011-R1a-SM-G8W85 60-69 years, female 262.2
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 259.8
GTEX-1JMQL-0011-R1a-SM-F3K4U 50-59 years, female 251.0
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 248.9
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 222.8
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 220.7
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 217.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 188.6
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 186.8
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 185.9
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 182.6
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 179.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 171.8
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 158.8
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 158.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 149.9
GTEX-1KANB-0011-R1a-SM-F3K5M 50-59 years, male 145.7
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 143.7
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 138.3
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 137.6
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 136.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 133.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 133.5
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 124.3
GTEX-1JN6P-0011-R1b-SM-G8LL3 60-69 years, male 119.8
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 119.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 110.3
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 109.9
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 107.2
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 105.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 103.2
GTEX-13PLJ-0011-R1a-SM-GJ3QF 60-69 years, female 96.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 94.6
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 94.0
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 90.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 90.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 87.1
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 86.8
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 86.3
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 77.3
GTEX-12696-0011-R1a-SM-GHWPW 60-69 years, male 72.3
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 70.8
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 61.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 58.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 50.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 46.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 41.3
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HIPPOCAMPUS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1703.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1703.8
FF:10169-103B7 60 years, female 2176.8
FF:10153-102I9 76 years, female 1230.7

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