HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:45.1 nTPM
HPA Brain:104.7 nTPM
GTEx:45.1 nTPM
FANTOM5:95.3 Scaled Tags Per Million
Pig:63.8 nTPM
Mouse:72.9 nTPM
Allen mouse:5.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027218Antibody HPA027381
Glial cells MediumNot detected
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 104.7
Sample id Sample description nTPM
Hippocampus
nTPM: 98.6
2621 Female, age 67, right hemisphere 108.6
2529 Female, age 94, left hemisphere 105.3
2148 Female, age 91, left hemisphere 103.9
1911 Female, age 85, right hemisphere 95.0
1855 Male, age 76, left hemisphere 93.2
1898 Male, age 80, left hemisphere 85.5
Dentate gyrus
nTPM: 100.2
2531 Female, age 67, both hemispheres 109.7
2246 Female, age 85, both hemispheres 105.8
2530 Female, age 94, left hemisphere 101.0
1927 Female, age 91, both hemispheres 100.3
2010 Male, age 76, both hemispheres 92.4
2528 Male, age 74, both hemispheres 92.2
Entorhinal gyrus
nTPM: 104.7
2764 Male, age 80, right hemisphere 110.3
2613 Female, age 94, left hemisphere 109.9
1787 Male, age 76, left hemisphere 109.7
2117 Female, age 91, right hemisphere 100.8
1938 Female, age 85, left hemisphere 98.8
2686 Male, age 75, right hemisphere 98.6
Hippocampus, CA1
nTPM: 95.7
2082 Female, age 91, right hemisphere 106.4
1873 Female, age 85, both hemispheres 101.9
2045 Male, age 76, both hemispheres 93.5
2749 Male, age 80, left hemisphere 88.4
2527 Male, age 74, both hemispheres 88.2
Hippocampus, CA2
nTPM: 97.9
1940 Female, age 85, left hemisphere 101.5
1963 Male, age 80, left hemisphere 100.7
2437 Female, age 94, left hemisphere 100.1
2113 Female, age 91, right hemisphere 98.4
2249 Male, age 74, both hemispheres 96.1
1892 Male, age 76, both hemispheres 90.8
Hippocampus, CA3
nTPM: 100.1
2620 Female, age 94, left hemisphere 113.5
2861 Female, age 67, both hemispheres 113.2
1891 Female, age 85, both hemispheres 104.7
2436 Male, age 74, both hemispheres 94.3
1867 Male, age 76, both hemispheres 89.5
2137 Male, age 80, left hemisphere 85.6
Parahippocampal cortex
nTPM: 103.6
2532 Female, age 72, left hemisphere 121.3
2622 Female, age 67, right hemisphere 108.5
2692 Male, age 74, both hemispheres 108.3
2245 Female, age 91, both hemispheres 108.0
1850 Male, age 80, both hemispheres 107.8
2693 Female, age 94, both hemispheres 104.0
1990 Female, age 91, right hemisphere 99.9
1933 Female, age 85, both hemispheres 96.6
2018 Male, age 76, both hemispheres 92.2
2250 Female, age 67, right hemisphere 89.3
Perirhinal gyrus
nTPM: 101.8
1794 Male, age 80, right hemisphere 112.3
2848 Male, age 76, right hemisphere 109.3
1841 Female, age 85, right hemisphere 99.4
1847 Female, age 91, left hemisphere 95.4
2521 Female, age 94, right hemisphere 92.8
Subiculum
nTPM: 98.6
2619 Male, age 74, both hemispheres 102.5
1977 Female, age 85, both hemispheres 101.0
2729 Female, age 91, right hemisphere 99.5
1901 Male, age 80, both hemispheres 98.0
2042 Male, age 76, both hemispheres 96.6
2438 Female, age 94, left hemisphere 94.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 45.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 45.1
Samples: 255

Max nTPM: 71.9
Min nTPM: 20.0
Std nTPM: 7.3
Median nTPM: 44.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 71.9
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 71.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 71.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 68.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 68.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 64.5
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 62.7
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 60.1
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 59.1
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 58.9
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 58.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 95.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 95.3
FF:10153-102I9 76 years, female 104.4
FF:10169-103B7 60 years, female 86.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 63.8
Pig sample Sample description nTPM
Subiculum
nTPM: 56.3
Samples: 4

Max nTPM: 65.6
Min nTPM: 50.7
Sample A Female 65.6
Sample B Female 55.2
Sample C Male 53.6
Sample D Male 50.7
Dorsal hippocampus
nTPM: 63.9
Samples: 4

Max nTPM: 71.2
Min nTPM: 54.4
Sample A Female 71.2
Sample B Female 66.6
Sample C Male 63.2
Sample D Male 54.4
Entorhinal cortex
nTPM: 57.7
Samples: 4

Max nTPM: 60.6
Min nTPM: 54.6
Sample A Female 57.6
Sample B Female 60.6
Sample C Male 54.6
Sample D Male 58.0
Ventral hippocampus
nTPM: 63.6
Samples: 4

Max nTPM: 70.3
Min nTPM: 54.7
Sample A Female 60.8
Sample B Female 54.7
Sample C Male 68.7
Sample D Male 70.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 72.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 72.9
Samples: 4

Max nTPM: 76.8
Min nTPM: 71.0
Sample A Male 72.8
Sample B Male 76.8
Sample C Female 71.0
Sample D Female 71.1
Hippocampal formation
nTPM: 70.4
Samples: 4

Max nTPM: 72.9
Min nTPM: 68.1
Sample A Male 72.9
Sample B Male 68.1
Sample C Female 70.7
Sample D Female 70.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 5.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.7
70429208 Antisense, RP_050614_01_C03, Mouse strain C57BL/6J (56 days, male) 7.8
70919304 Antisense, RP_050713_01_A11, Mouse strain C57BL/6J (56 days, male) 3.7

Contact

The Project

The Human Protein Atlas

KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo