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BEX1
HPA
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  • TISSUE

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  • BEX1
TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:113.5 nTPM
HPA Brain:142.4 nTPM
GTEx:113.5 nTPM
FANTOM5:373.4 Scaled Tags Per Million
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

142.4
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 108.5
2194 Female, age 79, both hemispheres 127.7
1981 Female, age 72, midline 116.4
2565 Male, age 75, midline 102.5
2816 Male, age 47, midline 102.5
2048 Male, age 55, midline 93.5
Cervical spinal cord, dorsal horn
nTPM: 142.4
2297 Male, age 75, both hemispheres 198.0
2721 Male, age 90, both hemispheres 177.2
2069 Male, age 47, both hemispheres 161.2
1877 Male, age 55, unknown 127.3
2173 Female, age 72, unknown 118.2
2296 Male, age 66, both hemispheres 72.5
Cervical spinal cord, ventral horn
nTPM: 94.1
2068 Male, age 55, unknown 130.2
2480 Male, age 75, both hemispheres 120.2
2820 Female, age 79, both hemispheres 104.7
2295 Male, age 66, both hemispheres 85.3
2809 Male, age 90, both hemispheres 72.8
2098 Female, age 72, unknown 51.1

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

113.5
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 113.5
Samples: 204

Max nTPM: 388.0
Min nTPM: 27.6
Std nTPM: 61.9
Median nTPM: 100.2
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 388.0
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 335.8
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 305.2
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 293.2
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 288.5
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 284.7
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 273.8
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 256.1
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 252.5
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 238.5
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 237.2
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 227.5
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 223.7
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 222.2
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 221.8
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 221.3
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 218.9
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 213.4
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 212.7
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 210.1
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 209.5
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 199.0
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 194.7
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 194.3
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 193.4
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 190.9
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 185.4
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 179.7
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 176.4
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 166.7
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 166.3
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 165.6
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 164.7
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 160.3
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 159.2
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 158.9
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 154.1
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 153.7
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 152.7
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 152.7
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 152.3
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 148.9
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 147.4
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 144.2
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 143.5
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 142.4
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 142.4
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 142.2
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 141.7
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 141.3
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 138.3
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 137.3
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 136.0
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 135.9
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 135.6
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 135.0
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 134.4
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 133.5
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 133.2
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 131.9
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 131.1
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 130.8
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 129.2
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 128.6
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 127.6
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 125.1
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 123.7
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 122.5
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 121.4
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 120.8
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 120.4
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 120.0
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 119.7
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 119.5
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 119.2
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 117.0
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 116.3
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 114.0
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 113.1
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 112.6
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 112.6
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 111.6
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 111.3
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 111.2
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 111.0
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 111.0
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 109.3
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 108.7
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 108.5
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 107.0
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 106.1
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 105.6
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 105.2
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 104.7
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 104.5
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 104.2
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 104.0
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 103.1
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 102.8
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 102.6
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 101.4
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 101.4
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 99.0
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 98.2
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 98.2
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 98.1
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 98.1
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 96.2
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 94.3
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 93.5
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 93.4
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 92.9
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 92.7
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 91.3
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 90.4
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 90.3
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 90.2
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 89.7
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 89.1
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 88.3
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 87.3
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 87.1
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 86.5
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 86.4
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 85.8
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 83.0
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 82.1
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 80.4
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 80.0
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 78.9
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 78.7
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 77.1
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 75.9
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 75.8
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 75.8
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 75.7
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 75.2
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 75.0
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 74.5
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 74.3
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 73.5
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 73.0
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 72.9
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 72.8
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 72.7
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 71.7
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 71.2
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 69.9
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 69.8
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 69.5
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 67.5
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 66.2
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 66.2
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 66.0
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 65.2
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 64.9
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 64.6
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 64.2
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 64.0
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 63.4
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 63.4
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 63.3
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 62.5
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 62.0
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 61.9
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 60.8
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 60.7
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 60.7
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 60.5
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 60.1
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 60.1
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 59.9
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 58.4
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 58.3
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 58.2
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 57.9
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 57.4
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 57.3
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 57.3
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 57.2
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 56.6
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 56.3
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 55.8
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 55.4
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 53.7
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 53.3
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 53.2
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 52.3
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 51.8
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 50.8
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 50.3
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 50.2
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 48.6
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 48.3
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 48.1
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 45.6
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 42.9
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 42.4
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 41.2
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 41.1
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 38.6
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 37.2
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 33.8
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 27.6
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

373.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 373.4
FF:10181-103D1 60 years, female 612.0
FF:10159-103A6 76 years, female 134.9

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