HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:112.6 nTPM
HPA Brain:105.8 nTPM
GTEx:112.6 nTPM
FANTOM5:108.6 Scaled Tags Per Million
Pig:46.3 nTPM
Mouse:48.2 nTPM
Allen mouse:3.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036898Antibody HPA036899Antibody CAB026196
Glial cells MediumMediumMedium
Neuronal cells LowNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 105.8
Sample id Sample description nTPM
Hippocampus
nTPM: 95.4
2529 Female, age 94, left hemisphere 115.0
1898 Male, age 80, left hemisphere 100.2
1911 Female, age 85, right hemisphere 93.5
2148 Female, age 91, left hemisphere 93.4
1855 Male, age 76, left hemisphere 86.2
2621 Female, age 67, right hemisphere 84.0
Dentate gyrus
nTPM: 84.1
2528 Male, age 74, both hemispheres 95.7
2530 Female, age 94, left hemisphere 95.6
2010 Male, age 76, both hemispheres 93.1
2246 Female, age 85, both hemispheres 82.1
1927 Female, age 91, both hemispheres 72.5
2531 Female, age 67, both hemispheres 65.7
Entorhinal gyrus
nTPM: 94.2
2117 Female, age 91, right hemisphere 120.2
2764 Male, age 80, right hemisphere 104.5
1938 Female, age 85, left hemisphere 97.8
1787 Male, age 76, left hemisphere 87.4
2686 Male, age 75, right hemisphere 81.0
2613 Female, age 94, left hemisphere 74.2
Hippocampus, CA1
nTPM: 82.5
2527 Male, age 74, both hemispheres 90.0
1873 Female, age 85, both hemispheres 87.4
2749 Male, age 80, left hemisphere 87.4
2082 Female, age 91, right hemisphere 83.4
2045 Male, age 76, both hemispheres 64.0
Hippocampus, CA2
nTPM: 93.0
2249 Male, age 74, both hemispheres 100.6
1963 Male, age 80, left hemisphere 99.8
2113 Female, age 91, right hemisphere 96.1
2437 Female, age 94, left hemisphere 93.4
1940 Female, age 85, left hemisphere 85.5
1892 Male, age 76, both hemispheres 82.5
Hippocampus, CA3
nTPM: 85.7
1891 Female, age 85, both hemispheres 103.9
2620 Female, age 94, left hemisphere 89.6
1867 Male, age 76, both hemispheres 87.5
2436 Male, age 74, both hemispheres 87.1
2137 Male, age 80, left hemisphere 79.1
2861 Female, age 67, both hemispheres 66.9
Parahippocampal cortex
nTPM: 87.2
1850 Male, age 80, both hemispheres 98.9
1933 Female, age 85, both hemispheres 91.7
1990 Female, age 91, right hemisphere 91.4
2692 Male, age 74, both hemispheres 91.4
2532 Female, age 72, left hemisphere 90.3
2018 Male, age 76, both hemispheres 89.3
2250 Female, age 67, right hemisphere 86.9
2245 Female, age 91, both hemispheres 83.5
2622 Female, age 67, right hemisphere 75.3
2693 Female, age 94, both hemispheres 73.2
Perirhinal gyrus
nTPM: 83.9
1794 Male, age 80, right hemisphere 90.5
1841 Female, age 85, right hemisphere 88.5
1847 Female, age 91, left hemisphere 87.6
2848 Male, age 76, right hemisphere 77.6
2521 Female, age 94, right hemisphere 75.4
Subiculum
nTPM: 105.8
2042 Male, age 76, both hemispheres 127.0
1901 Male, age 80, both hemispheres 105.6
2619 Male, age 74, both hemispheres 103.9
1977 Female, age 85, both hemispheres 103.8
2729 Female, age 91, right hemisphere 101.6
2438 Female, age 94, left hemisphere 92.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 112.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 112.6
Samples: 255

Max nTPM: 259.3
Min nTPM: 48.4
Std nTPM: 28.5
Median nTPM: 107.1
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 259.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 201.1
GTEX-1JN6P-0011-R1b-SM-G8LL3 60-69 years, male 200.6
GTEX-1KANB-0011-R1a-SM-F3K5M 50-59 years, male 198.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 195.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 188.5
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 184.8
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 180.6
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 178.4
GTEX-ZYFD-0011-R1b-SM-GRR1T 50-59 years, male 176.6
GTEX-13PVQ-0011-R1b-SM-GJ3RQ 50-59 years, male 176.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 108.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 108.6
FF:10169-103B7 60 years, female 110.0
FF:10153-102I9 76 years, female 107.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 46.3
Pig sample Sample description nTPM
Subiculum
nTPM: 46.4
Samples: 4

Max nTPM: 62.8
Min nTPM: 37.5
Sample A Female 62.8
Sample B Female 45.1
Sample C Male 37.5
Sample D Male 40.0
Dorsal hippocampus
nTPM: 39.5
Samples: 4

Max nTPM: 49.0
Min nTPM: 30.9
Sample A Female 49.0
Sample B Female 39.4
Sample C Male 38.7
Sample D Male 30.9
Entorhinal cortex
nTPM: 45.7
Samples: 4

Max nTPM: 52.9
Min nTPM: 35.7
Sample A Female 44.7
Sample B Female 49.4
Sample C Male 52.9
Sample D Male 35.7
Ventral hippocampus
nTPM: 42.4
Samples: 4

Max nTPM: 54.8
Min nTPM: 36.0
Sample A Female 42.2
Sample B Female 36.0
Sample C Male 54.8
Sample D Male 36.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 48.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 42.8
Samples: 4

Max nTPM: 44.4
Min nTPM: 41.3
Sample A Male 42.5
Sample B Male 44.4
Sample C Female 43.0
Sample D Female 41.3
Hippocampal formation
nTPM: 48.3
Samples: 4

Max nTPM: 50.9
Min nTPM: 46.7
Sample A Male 46.7
Sample B Male 47.8
Sample C Female 50.9
Sample D Female 47.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.6
68442967 Antisense, RP_050111_01_B04, Mouse strain C57BL/6J (56 days, male) 7.0
70918772 Antisense, RP_050712_04_E01, Mouse strain C57BL/6J (56 days, male) 0.1

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