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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
10.2
nTPM
HPA Brain:
79.5
nTPM
GTEx:
10.2
nTPM
FANTOM5:
54.2
Scaled Tags Per Million
Pig:
19.9
nTPM
Mouse:
7.6
nTPM
Allen mouse:
0.2
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
79.5
Sample id
Sample description
nTPM
Amygdala nTPM: 79.5
2695
Female, age 67, right hemisphere
94.8
2514
Male, age 75, right hemisphere
83.9
2517
Female, age 94, left hemisphere
73.8
2814
Male, age 76, right hemisphere
73.8
1987
Female, age 91, left hemisphere
71.4
Basal amygdala nTPM: 69.3
2609
Male, age 75, right hemisphere
94.4
2243
Female, age 91, right hemisphere
71.3
2110
Male, age 80, left hemisphere
69.2
2685
Female, age 94, left hemisphere
66.7
1955
Male, age 76, both hemispheres
59.8
2827
Female, age 67, right hemisphere
54.6
Central amygdala nTPM: 64.3
1905
Male, age 76, both hemispheres
81.3
2239
Male, age 80, left hemisphere
62.6
2515
Male, age 75, right hemisphere
61.1
2701
Female, age 91, right hemisphere
59.6
2826
Female, age 94, left hemisphere
56.9
Corticomedial amygdala nTPM: 60.1
2428
Male, age 75, right hemisphere
76.7
2429
Female, age 94, left hemisphere
66.7
2242
Female, age 91, right hemisphere
60.1
2829
Male, age 80, left hemisphere
55.4
2535
Female, age 67, right hemisphere
51.9
2240
Male, age 76, both hemispheres
49.9
Lateral amygdala nTPM: 71.7
2516
Male, age 75, right hemisphere
98.0
2255
Female, age 91, right hemisphere
77.1
2256
Male, age 80, left hemisphere
70.8
1883
Male, age 76, both hemispheres
64.9
2534
Female, age 94, left hemisphere
60.8
2830
Female, age 67, right hemisphere
58.2
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
10.2
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 10.2
Samples: 152
Max nTPM: 31.1
Min nTPM: 0.6
Std nTPM: 5.4
Median nTPM: 9.1
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
31.1
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
29.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
26.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
25.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
25.1
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
22.4
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
20.6
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
20.5
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
20.4
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
19.8
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
19.2
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
19.2
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
19.1
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
18.8
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
18.5
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
18.4
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
18.1
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
17.8
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
16.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
15.6
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
15.2
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
15.2
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
15.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
15.0
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
14.9
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
14.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
14.4
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
14.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
14.0
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
13.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
13.8
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
13.8
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
13.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
13.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
13.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
12.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
12.9
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
12.8
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
12.7
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
12.7
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
12.5
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
12.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
12.4
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
12.2
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
11.9
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
11.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
11.7
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
11.3
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
11.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
11.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
11.2
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
11.1
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
11.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
11.0
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
10.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
10.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
10.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
10.8
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
10.7
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
10.7
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
10.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
10.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
10.5
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
10.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
10.4
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
10.1
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
9.9
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
9.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
9.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
9.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
9.5
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
9.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
9.5
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
9.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
9.2
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
9.2
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
9.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
9.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
8.8
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
8.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
8.5
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
8.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
8.5
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
8.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
8.4
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
8.4
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
8.3
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
8.3
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
8.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
8.1
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
8.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
8.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
7.9
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
7.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
7.7
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
7.7
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
7.7
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
7.6
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
7.6
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
7.5
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
7.3
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
7.3
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
7.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
7.2
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
7.2
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
7.1
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
7.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
6.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
6.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
6.8
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
6.7
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
6.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
6.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
6.5
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
6.5
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
6.4
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
6.3
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
6.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
6.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
6.2
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
6.2
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
6.0
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
5.9
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
5.9
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
5.7
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
5.6
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
5.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
5.4
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
5.0
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
5.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
5.0
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
4.9
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
4.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
4.7
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
4.6
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
4.5
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
4.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
4.2
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
4.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
4.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
3.9
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
3.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
3.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
3.5
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
3.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
3.2
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
3.1
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
3.1
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
2.9
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
2.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
2.4
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
0.6
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
7.6
Mouse sample
Sample description
nTPM
Amygdala nTPM: 7.6
Samples: 4
Max nTPM: 8.7
Min nTPM: 6.9
Sample A
Male
6.9
Sample B
Male
7.3
Sample C
Female
7.6
Sample D
Female
8.7
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.