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  • TISSUE

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  • ELP2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:10.9 nTPM
HPA Brain:28.1 nTPM
GTEx:10.9 nTPM
Pig:16.7 nTPM
Mouse:83.0 nTPM
Allen mouse:2.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

28.1
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 28.1
2226 Male, age 75, left hemisphere 29.9
1961 Female, age 42, unknown 26.3
Dorsomedial nucleus
nTPM: 24.2
2041 Female, age 72, unknown 26.9
1989 Male, age 62, unknown 23.8
2017 Female, age 42, unknown 22.0
Lateral hypothalamic area
nTPM: 25.1
1791 Male, age 80, right hemisphere 27.5
2228 Male, age 66, unknown 26.9
2412 Male, age 62, unknown 23.4
2271 Male, age 75, both hemispheres 22.5
Mammillary body
nTPM: 21.7
1923 Female, age 72, unknown 25.5
1948 Female, age 72, unknown 22.1
1945 Male, age 80, right hemisphere 21.7
2413 Male, age 66, unknown 20.0
1834 Female, age 42, unknown 19.3
Paraventricular nucleus
nTPM: 20.7
2700 Male, age 62, unknown 20.7
Preoptic area
nTPM: 23.9
1907 Male, age 80, right hemisphere 26.5
1861 Female, age 42, unknown 23.4
2414 Female, age 72, unknown 21.8
Supraoptic nucleus
nTPM: 25.1
1894 Female, age 72, unknown 28.4
2043 Male, age 62, unknown 24.6
2835 Female, age 72, unknown 22.4
Ventromedial nucleus
nTPM: 25.3
1982 Female, age 72, unknown 26.0
1822 Female, age 42, unknown 24.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

10.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 10.9
Samples: 257

Max nTPM: 19.2
Min nTPM: 6.2
Std nTPM: 2.3
Median nTPM: 10.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 19.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 18.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 17.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 17.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 17.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 16.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 16.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 16.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 16.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 16.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 15.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 15.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 15.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 15.3
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 15.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 15.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 15.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 15.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 15.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 14.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 14.8
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 14.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 14.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 14.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 14.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 14.5
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 14.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 14.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 14.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 14.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 14.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 14.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 13.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 13.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 13.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 13.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 13.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 13.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 13.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 13.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 13.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 13.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 13.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 12.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 12.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 12.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 12.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 12.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 12.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 12.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 12.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 12.6
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 12.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 12.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 12.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 12.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 12.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 12.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 12.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 12.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 12.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 12.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 12.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 12.2
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 12.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 12.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 12.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 12.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 12.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 12.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 11.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 11.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 11.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 11.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 11.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 11.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 11.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 11.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 11.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 11.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 11.6
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 11.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 11.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 11.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 11.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 11.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 11.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 11.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 11.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 11.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 11.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 11.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 11.5
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 11.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 11.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 11.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 11.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 11.4
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 11.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 11.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 11.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 11.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 11.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 11.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 11.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 11.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 11.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 11.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 11.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 11.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 11.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 11.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 11.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 11.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 10.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 10.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 10.9
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 10.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 10.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 10.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 10.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 10.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 10.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 10.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 10.7
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 10.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 10.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 10.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 10.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 10.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 10.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 10.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 10.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 10.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 10.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 10.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 10.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 10.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 10.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 10.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 10.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 10.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 10.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 10.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 10.3
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 10.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 10.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 10.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 10.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 10.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 10.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 10.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 10.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 10.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 10.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 10.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 10.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 10.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 9.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 9.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 9.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 9.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 9.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 9.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 9.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 9.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 9.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 9.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 9.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 9.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 9.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 9.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 9.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 9.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 9.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 9.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 9.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 9.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 9.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 9.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 9.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 9.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 9.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 9.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 9.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 9.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 9.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 9.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 9.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 9.2
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 9.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 9.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 9.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 9.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 9.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 9.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 9.0
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 9.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 9.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 9.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 8.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 8.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 8.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 8.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 8.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 8.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 8.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 8.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 8.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 8.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 8.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 8.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 8.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 8.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 8.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 8.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 8.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 8.5
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 8.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 8.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 8.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 8.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 8.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 8.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 8.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 8.4
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 8.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 8.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 8.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 8.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 8.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 8.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 8.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 8.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 8.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 8.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 8.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 7.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 7.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 7.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 7.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 7.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 7.8
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 7.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 7.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 7.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 7.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 7.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 7.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 7.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 7.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 7.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 7.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 7.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 7.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 6.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 6.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

16.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 16.7
Samples: 4

Max nTPM: 18.2
Min nTPM: 15.7
Sample A Female 18.2
Sample B Female 16.4
Sample C Male 15.7
Sample D Male 16.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

83.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 83.0
Samples: 4

Max nTPM: 87.8
Min nTPM: 78.3
Sample A Male 81.4
Sample B Male 84.5
Sample C Female 87.8
Sample D Female 78.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 2.3
393196 Antisense, RP_040804_02_C04, Mouse strain C57BL/6J (56 days, male) 4.4
70919531 Antisense, RP_050713_01_E07, Mouse strain C57BL/6J (56 days, male) 0.3

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