HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:114.2 nTPM
HPA Brain:88.5 nTPM
GTEx:114.2 nTPM
FANTOM5:237.3 Scaled Tags Per Million
Pig:171.0 nTPM
Mouse:118.9 nTPM
Allen mouse:3.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody CAB014882Antibody CAB040567
Glial cells HighMedium
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 88.5
Sample id Sample description nTPM
Hippocampus
nTPM: 86.8
1911 Female, age 85, right hemisphere 95.5
2529 Female, age 94, left hemisphere 93.3
2148 Female, age 91, left hemisphere 89.0
1898 Male, age 80, left hemisphere 88.7
1855 Male, age 76, left hemisphere 85.9
2621 Female, age 67, right hemisphere 68.6
Dentate gyrus
nTPM: 71.7
2528 Male, age 74, both hemispheres 96.2
2246 Female, age 85, both hemispheres 82.2
2530 Female, age 94, left hemisphere 71.6
1927 Female, age 91, both hemispheres 70.0
2010 Male, age 76, both hemispheres 66.2
2531 Female, age 67, both hemispheres 43.7
Entorhinal gyrus
nTPM: 74.0
2117 Female, age 91, right hemisphere 126.7
1938 Female, age 85, left hemisphere 83.9
1787 Male, age 76, left hemisphere 68.8
2764 Male, age 80, right hemisphere 63.8
2613 Female, age 94, left hemisphere 51.2
2686 Male, age 75, right hemisphere 49.2
Hippocampus, CA1
nTPM: 77.7
2527 Male, age 74, both hemispheres 114.5
1873 Female, age 85, both hemispheres 87.6
2082 Female, age 91, right hemisphere 81.4
2749 Male, age 80, left hemisphere 57.3
2045 Male, age 76, both hemispheres 47.6
Hippocampus, CA2
nTPM: 83.4
2249 Male, age 74, both hemispheres 120.4
1940 Female, age 85, left hemisphere 98.9
2113 Female, age 91, right hemisphere 92.9
1963 Male, age 80, left hemisphere 76.7
2437 Female, age 94, left hemisphere 64.7
1892 Male, age 76, both hemispheres 46.9
Hippocampus, CA3
nTPM: 68.3
1891 Female, age 85, both hemispheres 106.9
2436 Male, age 74, both hemispheres 93.2
2620 Female, age 94, left hemisphere 64.9
1867 Male, age 76, both hemispheres 54.0
2137 Male, age 80, left hemisphere 47.8
2861 Female, age 67, both hemispheres 43.0
Parahippocampal cortex
nTPM: 71.9
2250 Female, age 67, right hemisphere 95.9
2692 Male, age 74, both hemispheres 89.3
1933 Female, age 85, both hemispheres 81.0
1990 Female, age 91, right hemisphere 79.6
2245 Female, age 91, both hemispheres 71.1
1850 Male, age 80, both hemispheres 67.1
2622 Female, age 67, right hemisphere 60.2
2018 Male, age 76, both hemispheres 59.3
2693 Female, age 94, both hemispheres 59.1
2532 Female, age 72, left hemisphere 56.4
Perirhinal gyrus
nTPM: 62.6
1847 Female, age 91, left hemisphere 75.2
1841 Female, age 85, right hemisphere 68.1
2521 Female, age 94, right hemisphere 61.4
1794 Male, age 80, right hemisphere 59.6
2848 Male, age 76, right hemisphere 48.9
Subiculum
nTPM: 88.5
2729 Female, age 91, right hemisphere 115.3
2042 Male, age 76, both hemispheres 91.6
2619 Male, age 74, both hemispheres 90.3
1977 Female, age 85, both hemispheres 86.8
1901 Male, age 80, both hemispheres 77.3
2438 Female, age 94, left hemisphere 69.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 114.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 114.2
Samples: 255

Max nTPM: 218.3
Min nTPM: 43.1
Std nTPM: 34.4
Median nTPM: 112.0
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 218.3
GTEX-1R9PO-0011-R1b-SM-F2I2G 60-69 years, female 215.7
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 202.0
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 193.1
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 192.8
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 192.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 187.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 185.5
GTEX-12ZZZ-0011-R1a-SM-GIN8I 60-69 years, male 181.9
GTEX-1LVAO-0011-R1a-SM-F649O 60-69 years, male 181.4
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 179.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 237.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 237.3
FF:10153-102I9 76 years, female 266.8
FF:10169-103B7 60 years, female 207.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 171.0
Pig sample Sample description nTPM
Subiculum
nTPM: 171.0
Samples: 4

Max nTPM: 200.9
Min nTPM: 148.7
Sample A Female 200.9
Sample B Female 176.8
Sample C Male 148.7
Sample D Male 157.5
Dorsal hippocampus
nTPM: 151.3
Samples: 4

Max nTPM: 186.2
Min nTPM: 128.5
Sample A Female 186.2
Sample B Female 136.8
Sample C Male 153.8
Sample D Male 128.5
Entorhinal cortex
nTPM: 156.7
Samples: 4

Max nTPM: 180.3
Min nTPM: 122.5
Sample A Female 143.6
Sample B Female 180.3
Sample C Male 180.3
Sample D Male 122.5
Ventral hippocampus
nTPM: 159.9
Samples: 4

Max nTPM: 174.2
Min nTPM: 135.7
Sample A Female 174.2
Sample B Female 156.1
Sample C Male 173.5
Sample D Male 135.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 118.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 102.5
Samples: 4

Max nTPM: 115.5
Min nTPM: 89.8
Sample A Male 115.5
Sample B Male 94.8
Sample C Female 109.7
Sample D Female 89.8
Hippocampal formation
nTPM: 119.0
Samples: 4

Max nTPM: 131.6
Min nTPM: 102.7
Sample A Male 127.9
Sample B Male 102.7
Sample C Female 131.6
Sample D Female 113.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.0
76081936 Antisense, RP_060626_01_B01, Mouse strain C57BL/6J (56 days, male) 3.0

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