We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
SRPK2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • SRPK2
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:33.1 nTPM
HPA Brain:94.8 nTPM
GTEx:33.1 nTPM
Pig:66.9 nTPM
Mouse:28.9 nTPM
Allen mouse:1.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

94.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 71.5
2226 Male, age 75, left hemisphere 80.2
1961 Female, age 42, unknown 62.8
Dorsomedial nucleus
nTPM: 79.9
1989 Male, age 62, unknown 90.4
2041 Female, age 72, unknown 75.1
2017 Female, age 42, unknown 74.3
Lateral hypothalamic area
nTPM: 86.9
2228 Male, age 66, unknown 97.8
2271 Male, age 75, both hemispheres 86.6
1791 Male, age 80, right hemisphere 82.7
2412 Male, age 62, unknown 80.7
Mammillary body
nTPM: 92.3
1923 Female, age 72, unknown 111.4
1945 Male, age 80, right hemisphere 95.2
1948 Female, age 72, unknown 91.7
1834 Female, age 42, unknown 83.0
2413 Male, age 66, unknown 80.1
Paraventricular nucleus
nTPM: 94.8
2700 Male, age 62, unknown 94.8
Preoptic area
nTPM: 86.3
1907 Male, age 80, right hemisphere 90.3
2414 Female, age 72, unknown 88.3
1861 Female, age 42, unknown 80.3
Supraoptic nucleus
nTPM: 76.2
1894 Female, age 72, unknown 80.9
2835 Female, age 72, unknown 77.2
2043 Male, age 62, unknown 70.5
Ventromedial nucleus
nTPM: 67.1
1982 Female, age 72, unknown 71.4
1822 Female, age 42, unknown 62.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

33.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 33.1
Samples: 257

Max nTPM: 93.0
Min nTPM: 15.4
Std nTPM: 9.7
Median nTPM: 32.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 93.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 64.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 64.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 63.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 58.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 58.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 55.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 52.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 50.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 50.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 49.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 47.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 46.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 46.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 46.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 46.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 46.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 46.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 46.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 46.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 45.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 45.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 45.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 44.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 44.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 44.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 44.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 44.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 43.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 43.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 43.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 43.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 43.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 43.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 42.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 42.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 42.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 41.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 41.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 41.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 41.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 41.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 41.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 41.3
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 41.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 40.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 40.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 40.8
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 40.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 40.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 40.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 40.2
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 40.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 40.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 40.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 39.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 39.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 39.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 39.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 39.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 39.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 39.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 39.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 39.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 39.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 38.9
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 38.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 38.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 38.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 38.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 38.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 37.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 37.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 37.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 37.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 37.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 36.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 36.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 36.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 36.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 36.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 36.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 36.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 36.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 35.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 35.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 35.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 35.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 35.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 35.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 35.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 35.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 35.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 35.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 35.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 35.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 35.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 35.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 35.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 34.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 34.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 34.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 34.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 34.7
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 34.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 34.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 34.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 34.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 34.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 34.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 34.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 34.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 34.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 34.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 34.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 34.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 33.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 33.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 33.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 33.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 33.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 33.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 33.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 32.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 32.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 32.6
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 32.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 32.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 32.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 32.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 32.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 32.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 32.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 32.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 31.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 31.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 31.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 31.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 31.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 31.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 31.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 30.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 30.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 30.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 30.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 30.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 30.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 30.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 30.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 30.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 30.3
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 30.3
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 30.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 30.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 30.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 29.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 29.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 29.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 29.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 29.4
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 29.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 29.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 29.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 29.1
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 29.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 29.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 29.0
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 29.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 28.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 28.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 28.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 28.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 28.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 28.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 28.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 28.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 28.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 27.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 27.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 27.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 27.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 27.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 27.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 26.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 26.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 26.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 26.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 26.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 26.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 26.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 26.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 26.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 25.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 25.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 25.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 25.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 25.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 25.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 25.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 25.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 25.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 25.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 25.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 25.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 25.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 24.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 24.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 24.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 24.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 24.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 24.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 24.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 24.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 24.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 24.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 24.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 23.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 23.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 23.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 23.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 23.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 23.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 23.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 23.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 22.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 22.7
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 22.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 22.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 22.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 22.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 22.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 22.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 22.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 21.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 21.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 21.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 21.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 21.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 20.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 20.2
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 20.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 19.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 19.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 19.5
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 19.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 19.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 19.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 19.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 19.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 19.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 18.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 18.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 18.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 17.0
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 16.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 16.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 15.4
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

66.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 66.9
Samples: 4

Max nTPM: 80.7
Min nTPM: 57.8
Sample A Female 80.7
Sample B Female 68.5
Sample C Male 60.7
Sample D Male 57.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

28.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 28.8
Samples: 4

Max nTPM: 31.5
Min nTPM: 27.7
Sample A Male 28.3
Sample B Male 27.8
Sample C Female 31.5
Sample D Female 27.7

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.1
634451 Antisense, RP_040914_01_A01, Mouse strain C57BL/6J (56 days, male) 1.1

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo