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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:94.8 nTPM
HPA Brain:101.3 nTPM
GTEx:94.8 nTPM
Pig:64.0 nTPM
Mouse:164.7 nTPM
Allen mouse:17.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

101.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 97.7
2226 Male, age 75, left hemisphere 115.7
1961 Female, age 42, unknown 79.6
Dorsomedial nucleus
nTPM: 83.2
2041 Female, age 72, unknown 94.3
1989 Male, age 62, unknown 83.8
2017 Female, age 42, unknown 71.5
Lateral hypothalamic area
nTPM: 101.3
2228 Male, age 66, unknown 112.4
1791 Male, age 80, right hemisphere 111.6
2271 Male, age 75, both hemispheres 107.2
2412 Male, age 62, unknown 74.0
Mammillary body
nTPM: 92.1
1923 Female, age 72, unknown 118.1
2413 Male, age 66, unknown 92.2
1948 Female, age 72, unknown 88.3
1945 Male, age 80, right hemisphere 85.5
1834 Female, age 42, unknown 76.7
Paraventricular nucleus
nTPM: 88.1
2700 Male, age 62, unknown 88.1
Preoptic area
nTPM: 85.1
1907 Male, age 80, right hemisphere 95.2
1861 Female, age 42, unknown 81.0
2414 Female, age 72, unknown 79.1
Supraoptic nucleus
nTPM: 94.7
1894 Female, age 72, unknown 104.0
2043 Male, age 62, unknown 93.4
2835 Female, age 72, unknown 86.9
Ventromedial nucleus
nTPM: 88.5
1982 Female, age 72, unknown 99.6
1822 Female, age 42, unknown 77.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

94.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 94.8
Samples: 257

Max nTPM: 155.5
Min nTPM: 60.8
Std nTPM: 16.2
Median nTPM: 93.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 155.5
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 146.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 142.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 141.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 133.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 131.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 129.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 127.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 125.4
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 124.9
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 124.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 123.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 123.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 121.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 121.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 120.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 120.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 120.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 119.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 119.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 118.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 118.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 118.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 117.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 116.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 116.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 116.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 116.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 116.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 115.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 115.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 115.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 115.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 114.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 114.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 112.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 111.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 110.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 110.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 110.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 110.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 110.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 110.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 110.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 110.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 109.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 109.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 109.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 109.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 108.7
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 108.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 108.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 108.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 107.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 107.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 107.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 107.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 107.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 107.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 106.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 106.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 106.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 105.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 105.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 105.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 104.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 104.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 104.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 103.8
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 102.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 102.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 102.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 102.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 102.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 102.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 101.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 101.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 101.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 101.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 101.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 101.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 100.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 100.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 99.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 99.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 99.4
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 99.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 99.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 99.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 98.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 98.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 98.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 98.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 98.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 97.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 97.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 97.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 97.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 97.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 97.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 97.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 96.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 96.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 96.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 96.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 96.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 96.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 96.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 96.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 96.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 96.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 96.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 95.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 95.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 95.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 95.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 95.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 95.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 95.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 95.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 94.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 94.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 94.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 94.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 94.2
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 94.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 93.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 93.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 93.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 93.2
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 92.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 92.9
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 92.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 92.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 92.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 92.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 92.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 91.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 91.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 91.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 91.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 91.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 91.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 91.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 91.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 90.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 90.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 90.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 90.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 89.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 89.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 89.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 89.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 88.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 88.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 88.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 88.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 88.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 87.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 87.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 87.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 87.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 87.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 87.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 86.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 86.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 86.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 86.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 86.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 86.5
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 86.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 86.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 86.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 86.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 86.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 86.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 85.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 85.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 85.7
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 85.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 85.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 85.4
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 85.4
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 85.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 85.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 85.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 85.1
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 85.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 85.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 84.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 84.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 84.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 84.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 84.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 84.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 83.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 83.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 83.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 83.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 82.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 82.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 82.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 82.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 82.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 82.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 81.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 81.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 80.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 80.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 80.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 80.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 79.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 79.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 79.6
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 79.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 79.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 79.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 79.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 78.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 78.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 77.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 77.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 77.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 77.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 77.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 76.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 76.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 76.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 76.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 75.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 75.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 75.1
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 75.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 74.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 74.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 74.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 74.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 73.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 73.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 72.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 72.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 72.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 71.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 71.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 71.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 69.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 68.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 68.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 68.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 67.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 66.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 66.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 63.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 62.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 61.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 61.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 60.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

64.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 64.0
Samples: 4

Max nTPM: 79.6
Min nTPM: 51.9
Sample A Female 79.6
Sample B Female 61.9
Sample C Male 62.6
Sample D Male 51.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

164.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 164.7
Samples: 4

Max nTPM: 176.5
Min nTPM: 151.4
Sample A Male 164.8
Sample B Male 176.5
Sample C Female 166.1
Sample D Female 151.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

17.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 17.7
81600108 Antisense, RP_080205_02_D01, Mouse strain C57BL/6J (56 days, male) 19.1
413791 Antisense, RP_040809_01_E01, Mouse strain C57BL/6J (56 days, male) 16.4

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