HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:17.1 nTPM
HPA Brain:12.5 nTPM
GTEx:17.1 nTPM
FANTOM5:30.0 Scaled Tags Per Million
Pig:18.1 nTPM
Mouse:0.6 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 12.5
Sample id Sample description nTPM
Hippocampus
nTPM: 11.4
1911 Female, age 85, right hemisphere 12.7
2621 Female, age 67, right hemisphere 11.9
2529 Female, age 94, left hemisphere 11.8
1855 Male, age 76, left hemisphere 11.6
2148 Female, age 91, left hemisphere 10.3
1898 Male, age 80, left hemisphere 10.0
Dentate gyrus
nTPM: 10.2
2010 Male, age 76, both hemispheres 13.5
2530 Female, age 94, left hemisphere 10.6
2246 Female, age 85, both hemispheres 10.4
2528 Male, age 74, both hemispheres 10.1
1927 Female, age 91, both hemispheres 8.5
2531 Female, age 67, both hemispheres 7.9
Entorhinal gyrus
nTPM: 10.1
2117 Female, age 91, right hemisphere 13.5
2686 Male, age 75, right hemisphere 10.5
1787 Male, age 76, left hemisphere 9.6
1938 Female, age 85, left hemisphere 9.6
2613 Female, age 94, left hemisphere 8.8
2764 Male, age 80, right hemisphere 8.7
Hippocampus, CA1
nTPM: 10.6
2045 Male, age 76, both hemispheres 12.0
2082 Female, age 91, right hemisphere 11.6
2527 Male, age 74, both hemispheres 11.3
1873 Female, age 85, both hemispheres 10.6
2749 Male, age 80, left hemisphere 7.3
Hippocampus, CA2
nTPM: 11.8
1940 Female, age 85, left hemisphere 13.2
2437 Female, age 94, left hemisphere 12.3
2249 Male, age 74, both hemispheres 12.2
2113 Female, age 91, right hemisphere 11.6
1892 Male, age 76, both hemispheres 10.6
1963 Male, age 80, left hemisphere 10.6
Hippocampus, CA3
nTPM: 10.4
2436 Male, age 74, both hemispheres 13.6
1867 Male, age 76, both hemispheres 13.0
1891 Female, age 85, both hemispheres 12.5
2861 Female, age 67, both hemispheres 8.0
2137 Male, age 80, left hemisphere 7.5
2620 Female, age 94, left hemisphere 7.5
Parahippocampal cortex
nTPM: 10.6
2018 Male, age 76, both hemispheres 15.3
2693 Female, age 94, both hemispheres 11.6
2250 Female, age 67, right hemisphere 11.2
2532 Female, age 72, left hemisphere 11.1
2692 Male, age 74, both hemispheres 11.1
1990 Female, age 91, right hemisphere 10.9
2622 Female, age 67, right hemisphere 9.7
2245 Female, age 91, both hemispheres 9.3
1850 Male, age 80, both hemispheres 8.8
1933 Female, age 85, both hemispheres 7.4
Perirhinal gyrus
nTPM: 10.2
2848 Male, age 76, right hemisphere 11.8
2521 Female, age 94, right hemisphere 10.9
1794 Male, age 80, right hemisphere 10.2
1841 Female, age 85, right hemisphere 9.6
1847 Female, age 91, left hemisphere 8.3
Subiculum
nTPM: 12.5
2042 Male, age 76, both hemispheres 14.4
2729 Female, age 91, right hemisphere 13.4
2438 Female, age 94, left hemisphere 12.9
2619 Male, age 74, both hemispheres 12.8
1901 Male, age 80, both hemispheres 11.4
1977 Female, age 85, both hemispheres 10.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 17.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.1
Samples: 255

Max nTPM: 39.1
Min nTPM: 7.7
Std nTPM: 4.4
Median nTPM: 17.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 39.1
GTEX-12696-0011-R1a-SM-GHWPW 60-69 years, male 36.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 30.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 29.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 29.1
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 26.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 25.7
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 25.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 25.6
GTEX-1JMQL-0011-R1a-SM-F3K4U 50-59 years, female 25.6
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 25.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 30.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 30.0
FF:10153-102I9 76 years, female 34.1
FF:10169-103B7 60 years, female 25.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 18.1
Pig sample Sample description nTPM
Subiculum
nTPM: 16.9
Samples: 4

Max nTPM: 20.3
Min nTPM: 13.0
Sample A Female 20.3
Sample B Female 13.0
Sample C Male 15.9
Sample D Male 18.5
Dorsal hippocampus
nTPM: 18.2
Samples: 4

Max nTPM: 23.5
Min nTPM: 13.0
Sample A Female 23.5
Sample B Female 13.0
Sample C Male 17.9
Sample D Male 18.2
Entorhinal cortex
nTPM: 15.6
Samples: 4

Max nTPM: 21.5
Min nTPM: 12.5
Sample A Female 21.5
Sample B Female 12.5
Sample C Male 13.7
Sample D Male 14.5
Ventral hippocampus
nTPM: 17.6
Samples: 4

Max nTPM: 22.4
Min nTPM: 14.2
Sample A Female 18.5
Sample B Female 14.2
Sample C Male 15.2
Sample D Male 22.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 0.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.5
Samples: 4

Max nTPM: 0.8
Min nTPM: 0.0
Sample A Male 0.8
Sample B Male 0.6
Sample C Female 0.6
Sample D Female 0.0
Hippocampal formation
nTPM: 0.6
Samples: 4

Max nTPM: 0.8
Min nTPM: 0.3
Sample A Male 0.8
Sample B Male 0.5
Sample C Female 0.3
Sample D Female 0.7

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