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  • TISSUE

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  • TTYH3
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:21.3 nTPM
HPA Brain:65.5 nTPM
GTEx:21.3 nTPM
Pig:28.5 nTPM
Mouse:48.1 nTPM
Allen mouse:2.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

65.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 55.5
2226 Male, age 75, left hemisphere 56.7
1961 Female, age 42, unknown 54.4
Dorsomedial nucleus
nTPM: 65.5
1989 Male, age 62, unknown 99.6
2017 Female, age 42, unknown 54.0
2041 Female, age 72, unknown 42.8
Lateral hypothalamic area
nTPM: 56.1
2271 Male, age 75, both hemispheres 71.5
1791 Male, age 80, right hemisphere 56.3
2412 Male, age 62, unknown 56.3
2228 Male, age 66, unknown 40.2
Mammillary body
nTPM: 57.2
2413 Male, age 66, unknown 75.1
1923 Female, age 72, unknown 64.7
1834 Female, age 42, unknown 53.5
1945 Male, age 80, right hemisphere 48.9
1948 Female, age 72, unknown 44.0
Paraventricular nucleus
nTPM: 46.5
2700 Male, age 62, unknown 46.5
Preoptic area
nTPM: 52.5
1861 Female, age 42, unknown 57.8
1907 Male, age 80, right hemisphere 51.8
2414 Female, age 72, unknown 47.8
Supraoptic nucleus
nTPM: 42.1
2835 Female, age 72, unknown 51.0
1894 Female, age 72, unknown 39.5
2043 Male, age 62, unknown 35.7
Ventromedial nucleus
nTPM: 54.3
1982 Female, age 72, unknown 60.2
1822 Female, age 42, unknown 48.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

21.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 21.3
Samples: 257

Max nTPM: 70.6
Min nTPM: 9.1
Std nTPM: 7.1
Median nTPM: 19.8
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 70.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 58.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 43.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 38.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 37.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 35.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 35.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 35.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 34.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 34.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 34.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 34.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 34.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 33.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 32.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 32.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 32.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 31.9
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 31.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 31.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 31.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 31.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 30.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 30.3
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 30.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 29.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 29.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 29.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 28.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 28.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 28.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 28.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 28.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 27.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 27.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 27.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 27.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 27.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 27.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 27.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 27.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 26.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 26.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 26.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 26.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 26.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 26.7
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 26.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 26.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 26.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 26.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 26.3
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 26.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 26.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 25.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 25.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 25.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 25.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 25.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 25.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 25.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 25.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 25.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 25.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 25.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 25.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 25.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 24.7
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 24.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 24.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 24.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 24.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 24.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 24.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 23.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 23.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 23.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 23.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 23.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 23.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 23.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 23.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 23.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 23.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 23.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 23.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 23.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 23.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 23.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 23.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 23.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 23.0
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 23.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 22.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 22.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 22.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 22.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 22.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 22.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 22.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 22.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 22.3
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 22.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 22.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 22.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 21.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 21.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 21.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 21.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 21.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 21.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 21.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 21.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 21.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 20.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 20.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 20.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 20.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 20.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 20.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 20.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 20.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 20.4
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 20.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 20.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 20.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 20.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 19.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 19.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 19.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 19.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 19.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 19.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 19.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 19.4
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 19.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 19.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 19.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 19.2
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 19.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 19.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 19.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 19.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 18.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 18.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 18.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 18.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 18.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 18.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 18.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 18.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 18.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 18.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 18.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 18.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 18.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 18.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 18.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 18.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 18.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 18.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 18.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 18.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 18.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 18.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 18.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 17.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 17.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 17.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 17.8
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 17.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 17.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 17.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 17.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 17.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 17.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 17.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 17.3
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 17.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 17.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 17.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 17.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 16.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 16.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 16.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 16.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 16.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 16.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 16.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 16.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 16.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 16.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 16.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 16.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 16.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 16.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 15.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 15.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 15.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 15.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 15.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 15.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 15.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 15.6
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 15.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 15.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 15.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 15.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 15.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 15.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 15.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 15.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 15.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 15.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 15.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 14.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 14.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 14.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 14.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 14.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 14.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 14.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 14.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 14.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 14.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 14.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 14.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 14.5
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 14.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 14.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 14.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 14.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 14.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 13.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 13.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 13.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 13.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 13.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 13.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 13.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 13.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 13.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 13.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 13.0
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 12.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 12.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 12.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 12.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 12.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 12.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 12.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 12.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 12.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 11.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 11.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 11.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 9.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

28.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 28.6
Samples: 4

Max nTPM: 34.2
Min nTPM: 25.1
Sample A Female 34.2
Sample B Female 26.5
Sample C Male 28.4
Sample D Male 25.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

48.1
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 48.1
Samples: 4

Max nTPM: 50.1
Min nTPM: 44.5
Sample A Male 50.1
Sample B Male 49.9
Sample C Female 44.5
Sample D Female 47.8

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.8
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 2.8
69863296 Antisense, RP_050331_04_H03, Mouse strain C57BL/6J (56 days, male) 2.8
74988711 Antisense, RP_060315_04_A10, Mouse strain C57BL/6J (56 days, male) 2.7

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