HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:47.4 nTPM
HPA Brain:106.7 nTPM
GTEx:47.4 nTPM
FANTOM5:79.6 Scaled Tags Per Million
Pig:41.2 nTPM
Mouse:28.1 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021646Antibody HPA059795
Glial cells Not detectedLow
Neuronal cells Not detectedNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 106.7
Sample id Sample description nTPM
Hippocampus
nTPM: 79.4
1855 Male, age 76, left hemisphere 90.4
2621 Female, age 67, right hemisphere 87.4
1911 Female, age 85, right hemisphere 86.2
1898 Male, age 80, left hemisphere 82.4
2529 Female, age 94, left hemisphere 65.9
2148 Female, age 91, left hemisphere 64.1
Dentate gyrus
nTPM: 72.3
1927 Female, age 91, both hemispheres 94.1
2010 Male, age 76, both hemispheres 87.0
2246 Female, age 85, both hemispheres 68.2
2530 Female, age 94, left hemisphere 65.2
2531 Female, age 67, both hemispheres 62.1
2528 Male, age 74, both hemispheres 57.3
Entorhinal gyrus
nTPM: 72.7
1938 Female, age 85, left hemisphere 86.6
2613 Female, age 94, left hemisphere 83.1
2764 Male, age 80, right hemisphere 71.6
1787 Male, age 76, left hemisphere 69.5
2686 Male, age 75, right hemisphere 63.3
2117 Female, age 91, right hemisphere 62.0
Hippocampus, CA1
nTPM: 99.0
2749 Male, age 80, left hemisphere 210.8
1873 Female, age 85, both hemispheres 86.7
2527 Male, age 74, both hemispheres 70.9
2045 Male, age 76, both hemispheres 65.4
2082 Female, age 91, right hemisphere 61.2
Hippocampus, CA2
nTPM: 81.2
1963 Male, age 80, left hemisphere 111.6
1892 Male, age 76, both hemispheres 105.7
2249 Male, age 74, both hemispheres 73.3
1940 Female, age 85, left hemisphere 67.6
2437 Female, age 94, left hemisphere 64.9
2113 Female, age 91, right hemisphere 63.9
Hippocampus, CA3
nTPM: 106.7
2137 Male, age 80, left hemisphere 256.0
1867 Male, age 76, both hemispheres 107.3
2436 Male, age 74, both hemispheres 81.4
1891 Female, age 85, both hemispheres 72.8
2861 Female, age 67, both hemispheres 61.5
2620 Female, age 94, left hemisphere 61.2
Parahippocampal cortex
nTPM: 72.5
1850 Male, age 80, both hemispheres 85.7
2245 Female, age 91, both hemispheres 84.1
1990 Female, age 91, right hemisphere 75.3
2018 Male, age 76, both hemispheres 72.2
2693 Female, age 94, both hemispheres 69.6
1933 Female, age 85, both hemispheres 69.2
2622 Female, age 67, right hemisphere 69.1
2250 Female, age 67, right hemisphere 68.0
2532 Female, age 72, left hemisphere 67.3
2692 Male, age 74, both hemispheres 65.0
Perirhinal gyrus
nTPM: 77.2
1847 Female, age 91, left hemisphere 91.9
1841 Female, age 85, right hemisphere 77.5
2521 Female, age 94, right hemisphere 76.3
1794 Male, age 80, right hemisphere 73.9
2848 Male, age 76, right hemisphere 66.4
Subiculum
nTPM: 84.2
1901 Male, age 80, both hemispheres 126.9
2042 Male, age 76, both hemispheres 97.8
2438 Female, age 94, left hemisphere 86.3
1977 Female, age 85, both hemispheres 73.7
2619 Male, age 74, both hemispheres 64.1
2729 Female, age 91, right hemisphere 56.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 47.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 47.4
Samples: 255

Max nTPM: 188.6
Min nTPM: 6.8
Std nTPM: 31.2
Median nTPM: 37.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 188.6
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 182.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 173.1
GTEX-15SHU-0011-R1b-SM-H6Q7U 40-49 years, female 147.1
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 143.2
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 139.7
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 133.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 132.5
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 132.2
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 123.7
GTEX-1C6VR-0011-R1a-SM-7MXUE 60-69 years, male 122.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 79.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 79.6
FF:10169-103B7 60 years, female 92.4
FF:10153-102I9 76 years, female 66.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 41.2
Pig sample Sample description nTPM
Subiculum
nTPM: 37.1
Samples: 4

Max nTPM: 42.4
Min nTPM: 33.4
Sample A Female 42.4
Sample B Female 33.4
Sample C Male 36.3
Sample D Male 36.1
Dorsal hippocampus
nTPM: 41.2
Samples: 4

Max nTPM: 45.0
Min nTPM: 35.2
Sample A Female 45.0
Sample B Female 42.8
Sample C Male 41.9
Sample D Male 35.2
Entorhinal cortex
nTPM: 40.0
Samples: 4

Max nTPM: 43.2
Min nTPM: 36.7
Sample A Female 42.7
Sample B Female 43.2
Sample C Male 37.4
Sample D Male 36.7
Ventral hippocampus
nTPM: 38.2
Samples: 4

Max nTPM: 44.2
Min nTPM: 31.6
Sample A Female 38.0
Sample B Female 31.6
Sample C Male 39.1
Sample D Male 44.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 28.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.1
Samples: 4

Max nTPM: 28.9
Min nTPM: 27.6
Sample A Male 28.0
Sample B Male 27.6
Sample C Female 28.9
Sample D Female 27.9
Hippocampal formation
nTPM: 27.0
Samples: 4

Max nTPM: 28.2
Min nTPM: 26.2
Sample A Male 26.3
Sample B Male 28.2
Sample C Female 27.1
Sample D Female 26.2

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