HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:11.3 nTPM
HPA Brain:51.9 nTPM
GTEx:11.3 nTPM
FANTOM5:93.4 Scaled Tags Per Million
Pig:24.2 nTPM
Mouse:22.7 nTPM
Allen mouse:2.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 51.9
Sample id Sample description nTPM
Hippocampus
nTPM: 41.9
2529 Female, age 94, left hemisphere 48.0
1898 Male, age 80, left hemisphere 43.7
2621 Female, age 67, right hemisphere 43.5
1911 Female, age 85, right hemisphere 41.7
1855 Male, age 76, left hemisphere 39.3
2148 Female, age 91, left hemisphere 35.5
Dentate gyrus
nTPM: 40.4
2530 Female, age 94, left hemisphere 58.8
2010 Male, age 76, both hemispheres 43.5
2246 Female, age 85, both hemispheres 40.9
2528 Male, age 74, both hemispheres 35.6
1927 Female, age 91, both hemispheres 32.2
2531 Female, age 67, both hemispheres 31.4
Entorhinal gyrus
nTPM: 47.9
2764 Male, age 80, right hemisphere 57.1
2117 Female, age 91, right hemisphere 52.2
2613 Female, age 94, left hemisphere 50.7
1938 Female, age 85, left hemisphere 49.5
2686 Male, age 75, right hemisphere 39.1
1787 Male, age 76, left hemisphere 38.7
Hippocampus, CA1
nTPM: 37.6
2749 Male, age 80, left hemisphere 46.1
1873 Female, age 85, both hemispheres 42.9
2527 Male, age 74, both hemispheres 38.5
2082 Female, age 91, right hemisphere 31.7
2045 Male, age 76, both hemispheres 28.9
Hippocampus, CA2
nTPM: 44.0
1940 Female, age 85, left hemisphere 47.6
1963 Male, age 80, left hemisphere 47.4
1892 Male, age 76, both hemispheres 45.9
2437 Female, age 94, left hemisphere 43.3
2249 Male, age 74, both hemispheres 42.8
2113 Female, age 91, right hemisphere 36.8
Hippocampus, CA3
nTPM: 37.4
1891 Female, age 85, both hemispheres 47.5
1867 Male, age 76, both hemispheres 46.4
2137 Male, age 80, left hemisphere 38.6
2436 Male, age 74, both hemispheres 33.9
2861 Female, age 67, both hemispheres 29.9
2620 Female, age 94, left hemisphere 28.4
Parahippocampal cortex
nTPM: 44.4
2532 Female, age 72, left hemisphere 53.6
1990 Female, age 91, right hemisphere 47.8
1933 Female, age 85, both hemispheres 47.4
2245 Female, age 91, both hemispheres 47.0
1850 Male, age 80, both hemispheres 46.9
2622 Female, age 67, right hemisphere 42.2
2018 Male, age 76, both hemispheres 42.0
2692 Male, age 74, both hemispheres 41.3
2250 Female, age 67, right hemisphere 39.0
2693 Female, age 94, both hemispheres 37.2
Perirhinal gyrus
nTPM: 42.8
2521 Female, age 94, right hemisphere 46.4
1841 Female, age 85, right hemisphere 44.1
1847 Female, age 91, left hemisphere 42.9
1794 Male, age 80, right hemisphere 41.4
2848 Male, age 76, right hemisphere 39.1
Subiculum
nTPM: 51.9
2438 Female, age 94, left hemisphere 59.5
2042 Male, age 76, both hemispheres 58.3
1901 Male, age 80, both hemispheres 57.8
1977 Female, age 85, both hemispheres 55.3
2619 Male, age 74, both hemispheres 47.3
2729 Female, age 91, right hemisphere 33.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 11.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.3
Samples: 255

Max nTPM: 24.4
Min nTPM: 3.9
Std nTPM: 3.9
Median nTPM: 10.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 24.4
GTEX-1QP6S-0011-R1b-SM-F3K59 40-49 years, male 24.3
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 24.3
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 22.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 22.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 22.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 21.8
GTEX-1KD4Q-0011-R1a-SM-F3K4Z 40-49 years, male 20.9
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 19.3
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 19.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 19.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 93.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 93.4
FF:10153-102I9 76 years, female 121.3
FF:10169-103B7 60 years, female 65.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 24.2
Pig sample Sample description nTPM
Subiculum
nTPM: 23.8
Samples: 4

Max nTPM: 25.6
Min nTPM: 22.4
Sample A Female 24.7
Sample B Female 22.4
Sample C Male 25.6
Sample D Male 22.5
Dorsal hippocampus
nTPM: 24.1
Samples: 4

Max nTPM: 29.9
Min nTPM: 13.9
Sample A Female 29.4
Sample B Female 23.0
Sample C Male 29.9
Sample D Male 13.9
Entorhinal cortex
nTPM: 20.1
Samples: 4

Max nTPM: 21.5
Min nTPM: 18.5
Sample A Female 19.4
Sample B Female 21.1
Sample C Male 21.5
Sample D Male 18.5
Ventral hippocampus
nTPM: 24.3
Samples: 4

Max nTPM: 28.0
Min nTPM: 21.9
Sample A Female 28.0
Sample B Female 22.4
Sample C Male 24.7
Sample D Male 21.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 22.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.7
Samples: 4

Max nTPM: 26.6
Min nTPM: 20.9
Sample A Male 21.5
Sample B Male 21.7
Sample C Female 20.9
Sample D Female 26.6
Hippocampal formation
nTPM: 17.6
Samples: 4

Max nTPM: 19.0
Min nTPM: 16.2
Sample A Male 16.2
Sample B Male 18.4
Sample C Female 19.0
Sample D Female 16.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.3
74510236 Antisense, RP_060208_01_D04, Mouse strain C57BL/6J (56 days, male) 2.3

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