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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
88.4
nTPM
HPA Brain:
100.0
nTPM
GTEx:
88.4
nTPM
FANTOM5:
141.1
Scaled Tags Per Million
Pig:
133.5
nTPM
Mouse:
141.1
nTPM
Allen mouse:
8.8
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
100.0
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 83.5
2586
Male, age 75, left hemisphere
101.8
2411
Female, age 72, unknown
95.1
1827
Male, age 72, unknown
88.2
2019
Male, age 18, unknown
87.7
2828
Female, age 72, unknown
86.0
2666
Male, age 74, left hemisphere
82.0
2219
Male, age 76, both hemispheres
77.3
1870
Female, age 42, unknown
76.5
1833
Male, age 53, unknown
70.9
1830
Male, age 51, unknown
69.2
Dorsal raphe nucleus nTPM: 83.7
2750
Male, age 76, both hemispheres
95.9
2298
Female, age 72, unknown
92.6
2047
Male, age 72, unknown
90.5
1828
Male, age 53, unknown
81.7
2016
Female, age 72, unknown
57.5
Inferior colliculus nTPM: 67.5
2097
Female, age 72, unknown
76.3
1848
Female, age 42, unknown
68.6
1890
Male, age 53, unknown
67.1
2849
Male, age 72, unknown
58.0
Median raphe nucleus nTPM: 85.3
2220
Male, age 76, midline
85.3
Periaquaductal grey, anterior nTPM: 88.2
1795
Male, age 51, unknown
89.8
2502
Female, age 75, unknown
89.1
1947
Male, age 18, unknown
85.8
Periaquaductal grey, dorsal nTPM: 60.0
2464
Female, age 72, unknown
65.3
1831
Male, age 72, unknown
60.0
1840
Male, age 53, unknown
59.6
2850
Male, age 76, both hemispheres
55.0
Periaquaductal grey, lateral nTPM: 59.3
2053
Male, age 18, unknown
63.1
2272
Male, age 74, both hemispheres
58.5
2140
Male, age 76, both hemispheres
56.4
Pretectal area nTPM: 80.5
1816
Male, age 51, unknown
101.6
2007
Male, age 72, unknown
101.5
1817
Female, age 42, unknown
96.8
1944
Female, age 72, unknown
94.5
1815
Male, age 53, unknown
85.9
2667
Female, age 75, unknown
83.3
2825
Male, age 18, unknown
69.9
2224
Female, age 72, unknown
68.9
2407
Male, age 75, both hemispheres
62.8
2316
Male, age 76, right hemisphere
60.5
2273
Male, age 74, both hemispheres
59.8
Red nucleus nTPM: 78.4
1821
Female, age 72, unknown
90.2
2785
Male, age 18, unknown
85.0
2584
Male, age 75, left hemisphere
80.8
2725
Female, age 75, unknown
80.1
2588
Male, age 74, left hemisphere
79.9
1865
Male, age 51, unknown
79.1
1904
Male, age 53, unknown
77.3
1954
Female, age 42, unknown
75.8
2769
Male, age 72, unknown
74.1
2503
Female, age 72, unknown
73.3
2227
Male, age 72, unknown
72.9
2823
Male, age 76, right hemisphere
71.7
Substantia nigra nTPM: 100.0
1916
Female, age 42, unknown
139.2
1941
Male, age 53, unknown
113.7
1851
Male, age 51, unknown
113.3
2241
Male, age 72, unknown
102.3
1889
Female, age 72, unknown
99.8
2409
Female, age 72, unknown
92.8
2665
Male, age 74, both hemispheres
90.3
2583
Male, age 75, right hemisphere
86.0
2699
Male, age 18, unknown
83.7
2590
Female, age 75, unknown
79.2
Superior colliculus nTPM: 74.3
2087
Female, age 72, unknown
87.1
1796
Male, age 53, unknown
84.5
2668
Female, age 75, unknown
84.2
2261
Male, age 18, unknown
82.6
1895
Male, age 76, right hemisphere
70.3
2587
Male, age 74, left hemisphere
70.1
1913
Female, age 42, unknown
69.8
2664
Male, age 75, both hemispheres
66.8
1839
Male, age 51, unknown
66.0
1995
Male, age 72, unknown
61.8
Ventral tegmental area nTPM: 92.5
2410
Female, age 72, unknown
120.4
2218
Male, age 76, both hemispheres
99.7
1915
Female, age 42, unknown
99.6
1942
Male, age 51, unknown
80.2
2223
Female, age 72, unknown
79.2
2021
Male, age 53, unknown
76.1
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
88.4
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 88.4
Samples: 139
Max nTPM: 211.0
Min nTPM: 45.2
Std nTPM: 24.5
Median nTPM: 84.3
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
211.0
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
163.8
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
151.8
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
149.7
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
143.6
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
131.8
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
131.3
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
126.9
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
126.1
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
124.6
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
123.1
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
121.9
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
121.8
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
120.1
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
119.8
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
118.9
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
117.5
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
114.8
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
114.6
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
114.6
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
113.5
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
113.2
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
110.7
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
110.5
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
107.3
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
105.5
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
105.3
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
104.5
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
104.2
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
102.8
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
102.6
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
102.4
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
102.4
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
101.5
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
101.5
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
101.3
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
101.3
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
99.9
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
98.8
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
97.5
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
97.2
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
96.5
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
95.3
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
94.0
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
93.7
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
93.4
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
93.4
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
93.0
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
92.7
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
92.6
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
92.4
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
92.2
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
92.1
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
92.1
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
91.8
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
89.5
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
89.4
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
89.0
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
88.9
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
88.5
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
88.0
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
88.0
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
87.1
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
86.4
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
86.2
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
86.0
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
85.7
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
85.3
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
84.8
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
84.3
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
83.5
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
83.5
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
83.2
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
83.2
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
82.3
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
82.3
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
82.3
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
82.3
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
82.2
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
81.0
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
80.7
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
80.0
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
80.0
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
79.8
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
79.5
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
79.0
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
78.4
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
77.7
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
77.3
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
77.1
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
77.1
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
77.1
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
77.0
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
75.9
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
75.2
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
75.1
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
74.9
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
74.4
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
74.0
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
73.9
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
73.2
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
71.7
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
71.6
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
71.6
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
71.5
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
71.1
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
70.7
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
70.1
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
69.8
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
69.3
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
69.0
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
68.5
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
68.0
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
67.6
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
67.0
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
66.5
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
66.5
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
65.9
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
63.9
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
63.8
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
63.6
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
63.0
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
62.6
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
62.1
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
61.3
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
60.3
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
60.3
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
60.2
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
60.0
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
57.8
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
57.7
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
57.5
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
56.2
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
56.0
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
54.1
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
53.6
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
53.3
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
50.7
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
45.2
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
141.1
Mouse sample
Sample description
nTPM
Midbrain nTPM: 141.1
Samples: 4
Max nTPM: 143.4
Min nTPM: 138.8
Sample A
Male
138.8
Sample B
Male
139.4
Sample C
Female
143.4
Sample D
Female
142.9
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.