HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:50.0 nTPM
HPA Brain:52.1 nTPM
GTEx:50.0 nTPM
FANTOM5:93.3 Scaled Tags Per Million
Pig:34.8 nTPM
Mouse:66.7 nTPM
Allen mouse:2.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049781
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 52.1
Sample id Sample description nTPM
Hippocampus
nTPM: 45.1
1898 Male, age 80, left hemisphere 60.5
1855 Male, age 76, left hemisphere 48.1
1911 Female, age 85, right hemisphere 46.7
2621 Female, age 67, right hemisphere 42.9
2529 Female, age 94, left hemisphere 38.9
2148 Female, age 91, left hemisphere 33.7
Dentate gyrus
nTPM: 42.6
2010 Male, age 76, both hemispheres 56.3
2530 Female, age 94, left hemisphere 46.6
1927 Female, age 91, both hemispheres 43.3
2246 Female, age 85, both hemispheres 39.5
2528 Male, age 74, both hemispheres 38.4
2531 Female, age 67, both hemispheres 31.5
Entorhinal gyrus
nTPM: 40.8
1938 Female, age 85, left hemisphere 49.2
2764 Male, age 80, right hemisphere 44.3
2613 Female, age 94, left hemisphere 41.4
1787 Male, age 76, left hemisphere 41.2
2117 Female, age 91, right hemisphere 39.1
2686 Male, age 75, right hemisphere 29.8
Hippocampus, CA1
nTPM: 52.1
2749 Male, age 80, left hemisphere 90.5
1873 Female, age 85, both hemispheres 54.2
2527 Male, age 74, both hemispheres 45.1
2045 Male, age 76, both hemispheres 35.4
2082 Female, age 91, right hemisphere 35.1
Hippocampus, CA2
nTPM: 48.0
1892 Male, age 76, both hemispheres 63.1
1963 Male, age 80, left hemisphere 62.4
2249 Male, age 74, both hemispheres 51.2
1940 Female, age 85, left hemisphere 37.6
2437 Female, age 94, left hemisphere 37.0
2113 Female, age 91, right hemisphere 36.5
Hippocampus, CA3
nTPM: 45.4
2137 Male, age 80, left hemisphere 72.6
1867 Male, age 76, both hemispheres 56.2
1891 Female, age 85, both hemispheres 46.6
2436 Male, age 74, both hemispheres 39.2
2620 Female, age 94, left hemisphere 32.2
2861 Female, age 67, both hemispheres 25.2
Parahippocampal cortex
nTPM: 37.9
1850 Male, age 80, both hemispheres 53.1
1933 Female, age 85, both hemispheres 45.6
2018 Male, age 76, both hemispheres 40.9
1990 Female, age 91, right hemisphere 40.8
2532 Female, age 72, left hemisphere 38.1
2245 Female, age 91, both hemispheres 37.3
2250 Female, age 67, right hemisphere 35.6
2693 Female, age 94, both hemispheres 34.0
2692 Male, age 74, both hemispheres 30.4
2622 Female, age 67, right hemisphere 22.9
Perirhinal gyrus
nTPM: 44.0
1847 Female, age 91, left hemisphere 49.7
1841 Female, age 85, right hemisphere 46.9
1794 Male, age 80, right hemisphere 45.6
2848 Male, age 76, right hemisphere 39.4
2521 Female, age 94, right hemisphere 38.5
Subiculum
nTPM: 43.8
1901 Male, age 80, both hemispheres 57.1
2042 Male, age 76, both hemispheres 55.7
1977 Female, age 85, both hemispheres 47.7
2438 Female, age 94, left hemisphere 38.2
2619 Male, age 74, both hemispheres 32.5
2729 Female, age 91, right hemisphere 31.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 50.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 50.0
Samples: 255

Max nTPM: 108.3
Min nTPM: 26.4
Std nTPM: 13.3
Median nTPM: 47.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 108.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 93.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 80.4
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 80.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 79.7
GTEX-1QP6S-0011-R1b-SM-F3K59 40-49 years, male 77.4
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 77.3
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 76.8
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 76.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 75.9
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 75.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 93.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 93.3
FF:10169-103B7 60 years, female 106.9
FF:10153-102I9 76 years, female 79.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 34.8
Pig sample Sample description nTPM
Subiculum
nTPM: 22.3
Samples: 4

Max nTPM: 26.8
Min nTPM: 19.8
Sample A Female 26.8
Sample B Female 22.2
Sample C Male 20.5
Sample D Male 19.8
Dorsal hippocampus
nTPM: 34.9
Samples: 4

Max nTPM: 37.7
Min nTPM: 31.4
Sample A Female 37.7
Sample B Female 36.4
Sample C Male 31.4
Sample D Male 33.9
Entorhinal cortex
nTPM: 21.5
Samples: 4

Max nTPM: 25.6
Min nTPM: 18.2
Sample A Female 20.3
Sample B Female 25.6
Sample C Male 21.7
Sample D Male 18.2
Ventral hippocampus
nTPM: 26.6
Samples: 4

Max nTPM: 40.2
Min nTPM: 20.1
Sample A Female 21.9
Sample B Female 20.1
Sample C Male 24.0
Sample D Male 40.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 66.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 58.8
Samples: 4

Max nTPM: 61.8
Min nTPM: 54.9
Sample A Male 59.1
Sample B Male 54.9
Sample C Female 61.8
Sample D Female 59.4
Hippocampal formation
nTPM: 66.7
Samples: 4

Max nTPM: 77.1
Min nTPM: 62.3
Sample A Male 63.0
Sample B Male 62.3
Sample C Female 77.1
Sample D Female 64.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.3
71280658 Antisense, RP_050818_01_C09, Mouse strain C57BL/6J (56 days, male) 2.3

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