HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:83.8 nTPM
HPA Brain:253.0 nTPM
GTEx:83.8 nTPM
FANTOM5:129.4 Scaled Tags Per Million
Pig:512.3 nTPM
Mouse:986.6 nTPM
Allen mouse:17.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012778Antibody CAB018581
Glial cells LowLow
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 253.0
Sample id Sample description nTPM
Hippocampus
nTPM: 178.8
1911 Female, age 85, right hemisphere 224.2
1898 Male, age 80, left hemisphere 201.3
2621 Female, age 67, right hemisphere 180.2
2148 Female, age 91, left hemisphere 180.1
1855 Male, age 76, left hemisphere 154.5
2529 Female, age 94, left hemisphere 132.4
Dentate gyrus
nTPM: 200.1
1927 Female, age 91, both hemispheres 369.7
2531 Female, age 67, both hemispheres 193.9
2246 Female, age 85, both hemispheres 178.3
2010 Male, age 76, both hemispheres 174.6
2530 Female, age 94, left hemisphere 144.5
2528 Male, age 74, both hemispheres 139.4
Entorhinal gyrus
nTPM: 138.2
1938 Female, age 85, left hemisphere 185.8
2764 Male, age 80, right hemisphere 153.0
2613 Female, age 94, left hemisphere 149.2
1787 Male, age 76, left hemisphere 128.1
2117 Female, age 91, right hemisphere 110.1
2686 Male, age 75, right hemisphere 103.2
Hippocampus, CA1
nTPM: 250.4
2749 Male, age 80, left hemisphere 488.6
1873 Female, age 85, both hemispheres 234.8
2045 Male, age 76, both hemispheres 226.8
2527 Male, age 74, both hemispheres 156.8
2082 Female, age 91, right hemisphere 145.0
Hippocampus, CA2
nTPM: 182.3
1892 Male, age 76, both hemispheres 264.2
1963 Male, age 80, left hemisphere 222.0
2113 Female, age 91, right hemisphere 171.8
2249 Male, age 74, both hemispheres 155.2
1940 Female, age 85, left hemisphere 153.2
2437 Female, age 94, left hemisphere 127.4
Hippocampus, CA3
nTPM: 253.0
2137 Male, age 80, left hemisphere 521.0
2620 Female, age 94, left hemisphere 267.8
1867 Male, age 76, both hemispheres 233.4
2436 Male, age 74, both hemispheres 183.4
1891 Female, age 85, both hemispheres 171.3
2861 Female, age 67, both hemispheres 140.9
Parahippocampal cortex
nTPM: 165.8
1850 Male, age 80, both hemispheres 249.5
2245 Female, age 91, both hemispheres 213.8
2693 Female, age 94, both hemispheres 174.1
2018 Male, age 76, both hemispheres 170.3
2532 Female, age 72, left hemisphere 168.0
1990 Female, age 91, right hemisphere 165.6
1933 Female, age 85, both hemispheres 152.2
2250 Female, age 67, right hemisphere 148.9
2622 Female, age 67, right hemisphere 130.0
2692 Male, age 74, both hemispheres 85.0
Perirhinal gyrus
nTPM: 218.7
1841 Female, age 85, right hemisphere 285.1
1794 Male, age 80, right hemisphere 261.0
1847 Female, age 91, left hemisphere 225.9
2521 Female, age 94, right hemisphere 167.4
2848 Male, age 76, right hemisphere 154.0
Subiculum
nTPM: 153.1
1901 Male, age 80, both hemispheres 258.1
2042 Male, age 76, both hemispheres 172.0
1977 Female, age 85, both hemispheres 144.6
2729 Female, age 91, right hemisphere 128.4
2438 Female, age 94, left hemisphere 122.5
2619 Male, age 74, both hemispheres 92.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 83.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 83.8
Samples: 255

Max nTPM: 396.3
Min nTPM: 11.7
Std nTPM: 51.3
Median nTPM: 77.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 396.3
GTEX-1KD4Q-0011-R1a-SM-F3K4Z 40-49 years, male 237.9
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 234.9
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 215.4
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 212.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 207.6
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 193.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 190.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 188.7
GTEX-1RQEC-0011-R1b-SM-F2I2E 60-69 years, male 186.5
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 177.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 129.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 129.4
FF:10169-103B7 60 years, female 173.4
FF:10153-102I9 76 years, female 85.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 512.3
Pig sample Sample description nTPM
Subiculum
nTPM: 193.5
Samples: 4

Max nTPM: 254.7
Min nTPM: 163.5
Sample A Female 254.7
Sample B Female 163.8
Sample C Male 191.8
Sample D Male 163.5
Dorsal hippocampus
nTPM: 512.3
Samples: 4

Max nTPM: 593.6
Min nTPM: 359.2
Sample A Female 593.1
Sample B Female 593.6
Sample C Male 359.2
Sample D Male 503.1
Entorhinal cortex
nTPM: 288.5
Samples: 4

Max nTPM: 328.8
Min nTPM: 244.8
Sample A Female 328.8
Sample B Female 321.1
Sample C Male 244.8
Sample D Male 259.4
Ventral hippocampus
nTPM: 345.2
Samples: 4

Max nTPM: 744.8
Min nTPM: 190.8
Sample A Female 210.3
Sample B Female 234.9
Sample C Male 190.8
Sample D Male 744.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 986.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 573.5
Samples: 4

Max nTPM: 616.1
Min nTPM: 513.9
Sample A Male 616.1
Sample B Male 590.4
Sample C Female 573.6
Sample D Female 513.9
Hippocampal formation
nTPM: 986.6
Samples: 4

Max nTPM: 1212.5
Min nTPM: 799.7
Sample A Male 853.2
Sample B Male 1081.1
Sample C Female 1212.5
Sample D Female 799.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 17.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.8
73817435 Antisense, RP_051101_01_A11, Mouse strain C57BL/6J (56 days, male) 18.0
69817246 Antisense, RP_050510_02_H10, Mouse strain C57BL/6J (56 days, male) 17.6

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