HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:3.0 nTPM
HPA Brain:17.3 nTPM
GTEx:3.0 nTPM
FANTOM5:1.8 Scaled Tags Per Million
Pig:5.0 nTPM
Mouse:9.2 nTPM
Allen mouse:0.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038520
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 17.3
Sample id Sample description nTPM
Hippocampus
nTPM: 16.0
2148 Female, age 91, left hemisphere 19.2
2621 Female, age 67, right hemisphere 18.3
1911 Female, age 85, right hemisphere 16.8
1898 Male, age 80, left hemisphere 15.7
1855 Male, age 76, left hemisphere 15.5
2529 Female, age 94, left hemisphere 10.8
Dentate gyrus
nTPM: 16.1
1927 Female, age 91, both hemispheres 23.0
2528 Male, age 74, both hemispheres 16.6
2246 Female, age 85, both hemispheres 16.2
2531 Female, age 67, both hemispheres 16.1
2010 Male, age 76, both hemispheres 13.7
2530 Female, age 94, left hemisphere 11.3
Entorhinal gyrus
nTPM: 11.9
2613 Female, age 94, left hemisphere 18.0
2764 Male, age 80, right hemisphere 13.0
2686 Male, age 75, right hemisphere 11.5
1938 Female, age 85, left hemisphere 11.3
1787 Male, age 76, left hemisphere 10.3
2117 Female, age 91, right hemisphere 7.6
Hippocampus, CA1
nTPM: 17.1
2749 Male, age 80, left hemisphere 23.3
2082 Female, age 91, right hemisphere 18.5
2527 Male, age 74, both hemispheres 18.0
1873 Female, age 85, both hemispheres 14.7
2045 Male, age 76, both hemispheres 11.1
Hippocampus, CA2
nTPM: 17.2
1963 Male, age 80, left hemisphere 30.0
2113 Female, age 91, right hemisphere 16.5
2249 Male, age 74, both hemispheres 15.5
1940 Female, age 85, left hemisphere 15.0
1892 Male, age 76, both hemispheres 14.9
2437 Female, age 94, left hemisphere 11.3
Hippocampus, CA3
nTPM: 17.3
2137 Male, age 80, left hemisphere 25.9
2620 Female, age 94, left hemisphere 20.3
2861 Female, age 67, both hemispheres 18.3
2436 Male, age 74, both hemispheres 15.2
1891 Female, age 85, both hemispheres 13.1
1867 Male, age 76, both hemispheres 10.9
Parahippocampal cortex
nTPM: 13.1
1850 Male, age 80, both hemispheres 16.1
2693 Female, age 94, both hemispheres 14.9
2622 Female, age 67, right hemisphere 14.7
2250 Female, age 67, right hemisphere 13.8
1933 Female, age 85, both hemispheres 13.4
2245 Female, age 91, both hemispheres 13.4
1990 Female, age 91, right hemisphere 13.2
2692 Male, age 74, both hemispheres 11.8
2532 Female, age 72, left hemisphere 10.8
2018 Male, age 76, both hemispheres 8.6
Perirhinal gyrus
nTPM: 14.3
1841 Female, age 85, right hemisphere 15.7
2521 Female, age 94, right hemisphere 15.3
1847 Female, age 91, left hemisphere 14.9
1794 Male, age 80, right hemisphere 13.4
2848 Male, age 76, right hemisphere 12.2
Subiculum
nTPM: 10.2
1901 Male, age 80, both hemispheres 12.8
2729 Female, age 91, right hemisphere 12.1
1977 Female, age 85, both hemispheres 12.0
2619 Male, age 74, both hemispheres 8.7
2042 Male, age 76, both hemispheres 8.5
2438 Female, age 94, left hemisphere 7.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 3.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 3.0
Samples: 255

Max nTPM: 21.5
Min nTPM: 0.0
Std nTPM: 3.5
Median nTPM: 1.9
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 21.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 20.3
GTEX-12696-0011-R1a-SM-GHWPW 60-69 years, male 17.5
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 16.5
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 16.2
GTEX-14JFF-0011-R1b-SM-G8W88 60-69 years, male 16.1
GTEX-1JMLX-0011-R1b-SM-G9ERV 50-59 years, male 16.1
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 14.7
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 13.8
GTEX-1F52S-0011-R1a-SM-9OSX9 60-69 years, female 13.5
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 13.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1.8
FF:10153-102I9 76 years, female 2.7
FF:10169-103B7 60 years, female 1.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 5.0
Pig sample Sample description nTPM
Subiculum
nTPM: 4.1
Samples: 4

Max nTPM: 4.6
Min nTPM: 3.6
Sample A Female 3.8
Sample B Female 4.6
Sample C Male 3.6
Sample D Male 4.3
Dorsal hippocampus
nTPM: 5.0
Samples: 4

Max nTPM: 5.9
Min nTPM: 3.8
Sample A Female 5.9
Sample B Female 5.1
Sample C Male 5.1
Sample D Male 3.8
Entorhinal cortex
nTPM: 4.2
Samples: 4

Max nTPM: 4.4
Min nTPM: 3.9
Sample A Female 4.3
Sample B Female 4.0
Sample C Male 3.9
Sample D Male 4.4
Ventral hippocampus
nTPM: 4.8
Samples: 4

Max nTPM: 5.2
Min nTPM: 4.2
Sample A Female 5.2
Sample B Female 4.2
Sample C Male 5.0
Sample D Male 4.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 9.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.2
Samples: 4

Max nTPM: 10.1
Min nTPM: 8.7
Sample A Male 8.7
Sample B Male 9.1
Sample C Female 9.0
Sample D Female 10.1
Hippocampal formation
nTPM: 6.7
Samples: 4

Max nTPM: 7.3
Min nTPM: 5.6
Sample A Male 7.2
Sample B Male 6.7
Sample C Female 5.6
Sample D Female 7.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
69443184 Antisense, RP_050414_03_E12, Mouse strain C57BL/6J (56 days, male) 0.8
74724776 Antisense, RP_060220_04_B10, Mouse strain C57BL/6J (56 days, male) 0.5

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