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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:44.1 nTPM
HPA Brain:136.4 nTPM
GTEx:44.1 nTPM
Pig:52.3 nTPM
Mouse:41.4 nTPM
Allen mouse:6.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

136.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 102.6
1961 Female, age 42, unknown 107.4
2226 Male, age 75, left hemisphere 97.7
Dorsomedial nucleus
nTPM: 89.5
2017 Female, age 42, unknown 109.3
2041 Female, age 72, unknown 108.1
1989 Male, age 62, unknown 51.1
Lateral hypothalamic area
nTPM: 96.7
2228 Male, age 66, unknown 133.8
2412 Male, age 62, unknown 91.4
1791 Male, age 80, right hemisphere 87.2
2271 Male, age 75, both hemispheres 74.3
Mammillary body
nTPM: 85.3
1923 Female, age 72, unknown 94.2
1948 Female, age 72, unknown 93.8
1945 Male, age 80, right hemisphere 88.1
1834 Female, age 42, unknown 83.5
2413 Male, age 66, unknown 66.6
Paraventricular nucleus
nTPM: 123.8
2700 Male, age 62, unknown 123.8
Preoptic area
nTPM: 113.2
1907 Male, age 80, right hemisphere 156.1
1861 Female, age 42, unknown 98.9
2414 Female, age 72, unknown 84.5
Supraoptic nucleus
nTPM: 90.1
1894 Female, age 72, unknown 96.5
2043 Male, age 62, unknown 91.7
2835 Female, age 72, unknown 82.1
Ventromedial nucleus
nTPM: 136.4
1982 Female, age 72, unknown 151.2
1822 Female, age 42, unknown 121.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

44.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 44.1
Samples: 257

Max nTPM: 88.2
Min nTPM: 14.6
Std nTPM: 10.4
Median nTPM: 43.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 88.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 78.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 78.0
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 73.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 69.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 69.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 68.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 68.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 67.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 63.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 61.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 60.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 60.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 60.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 58.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 58.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 58.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 58.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 57.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 57.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 57.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 57.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 57.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 57.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 57.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 56.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 56.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 56.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 56.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 56.1
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 56.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 56.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 56.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 55.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 54.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 54.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 54.7
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 54.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 54.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 54.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 53.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 53.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 53.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 53.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 53.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 52.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 52.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 52.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 52.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 52.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 52.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 52.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 52.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 52.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 52.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 51.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 51.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 51.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 50.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 50.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 50.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 50.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 50.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 49.9
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 49.7
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 49.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 49.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 49.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 49.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 48.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 48.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 48.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 48.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 48.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 48.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 48.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 47.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 47.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 47.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 47.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 47.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 47.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 47.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 47.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 47.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 47.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 47.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 47.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 47.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 47.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 46.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 46.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 46.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 46.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 46.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 46.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 46.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 46.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 46.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 46.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 46.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 46.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 46.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 46.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 46.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 46.0
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 45.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 45.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 45.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 45.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 45.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 44.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 44.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 44.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 44.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 44.2
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 44.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 44.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 44.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 44.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 43.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 43.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 43.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 43.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 43.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 43.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 43.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 43.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 43.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 43.0
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 42.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 42.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 42.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 42.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 42.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 42.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 42.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 42.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 42.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 42.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 42.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 42.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 42.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 42.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 42.1
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 41.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 41.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 41.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 41.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 41.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 41.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 41.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 41.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 41.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 41.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 41.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 41.6
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 41.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 41.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 41.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 41.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 41.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 41.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 41.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 41.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 41.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 40.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 40.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 40.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 40.4
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 40.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 40.3
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 40.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 40.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 39.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 39.7
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 39.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 39.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 39.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 39.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 38.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 38.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 38.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 38.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 38.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 38.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 38.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 38.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 38.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 38.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 37.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 37.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 37.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 37.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 37.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 37.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 37.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 37.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 37.1
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 36.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 36.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 36.6
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 36.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 36.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 36.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 35.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 35.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 35.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 35.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 35.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 35.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 34.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 34.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 34.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 34.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 34.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 34.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 34.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 33.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 33.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 33.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 33.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 32.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 32.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 32.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 32.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 31.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 31.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 31.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 31.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 30.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 30.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 30.1
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 30.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 30.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 29.9
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 29.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 29.5
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 29.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 29.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 28.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 28.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 28.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 28.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 27.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 27.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 27.3
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 27.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 26.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 26.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 25.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 24.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 23.7
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 22.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 22.5
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 19.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 14.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

52.3
Pig sample Sample description nTPM
Hypothalamus
nTPM: 52.3
Samples: 4

Max nTPM: 62.6
Min nTPM: 48.3
Sample A Female 62.6
Sample B Female 48.8
Sample C Male 48.3
Sample D Male 49.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

41.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 41.4
Samples: 4

Max nTPM: 42.6
Min nTPM: 38.7
Sample A Male 42.6
Sample B Male 42.4
Sample C Female 41.9
Sample D Female 38.7

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 6.7
70300565 Antisense, RP_050607_01_G10, Mouse strain C57BL/6J (56 days, male) 11.6
73931640 Antisense, RP_051214_04_B08, Mouse strain C57BL/6J (56 days, male) 1.8

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