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FAM181A
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  • FAM181A
BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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Brain proteome
Amygdala
Brain methods
AMYGDALA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:13.9 nTPM
HPA Brain:6.4 nTPM
GTEx:13.9 nTPM
FANTOM5:7.6 Scaled Tags Per Million
Pig:9.9 nTPM
Mouse:3.9 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

6.4
Sample id Sample description nTPM
Amygdala
nTPM: 5.2
1987 Female, age 91, left hemisphere 8.7
2517 Female, age 94, left hemisphere 5.1
2695 Female, age 67, right hemisphere 5.1
2814 Male, age 76, right hemisphere 4.2
2514 Male, age 75, right hemisphere 3.1
Basal amygdala
nTPM: 4.3
2110 Male, age 80, left hemisphere 6.9
2609 Male, age 75, right hemisphere 5.1
1955 Male, age 76, both hemispheres 4.3
2243 Female, age 91, right hemisphere 3.9
2685 Female, age 94, left hemisphere 3.4
2827 Female, age 67, right hemisphere 2.4
Central amygdala
nTPM: 6.4
2515 Male, age 75, right hemisphere 9.0
2239 Male, age 80, left hemisphere 6.8
1905 Male, age 76, both hemispheres 6.2
2701 Female, age 91, right hemisphere 5.4
2826 Female, age 94, left hemisphere 4.8
Corticomedial amygdala
nTPM: 3.8
2829 Male, age 80, left hemisphere 5.6
2428 Male, age 75, right hemisphere 4.6
2242 Female, age 91, right hemisphere 3.9
2429 Female, age 94, left hemisphere 3.4
2240 Male, age 76, both hemispheres 2.9
2535 Female, age 67, right hemisphere 2.6
Lateral amygdala
nTPM: 4.9
2256 Male, age 80, left hemisphere 7.3
2255 Female, age 91, right hemisphere 5.9
1883 Male, age 76, both hemispheres 4.4
2516 Male, age 75, right hemisphere 4.3
2830 Female, age 67, right hemisphere 3.9
2534 Female, age 94, left hemisphere 3.7

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

13.9
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 13.9
Samples: 181

Max nTPM: 35.4
Min nTPM: 3.1
Std nTPM: 6.5
Median nTPM: 13.0
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 35.4
GTEX-147F4-0011-R4b-SM-GJ3R4 50-59 years, male 35.3
GTEX-1JMQK-0011-R4a-SM-G8LLQ 60-69 years, male 34.5
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 33.4
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 31.4
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 29.6
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 27.4
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 27.0
GTEX-1PWST-0011-R4a-SM-F2T9X 70-79 years, male 26.3
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 25.5
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 24.8
GTEX-1JJ6O-0011-R4a-SM-EY5YM 60-69 years, male 24.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 24.6
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 23.9
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 23.5
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 23.4
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 23.3
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 23.2
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 23.1
GTEX-1JMOU-0011-R4b-SM-EY5ZL 60-69 years, female 23.1
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 22.7
GTEX-1LB8K-0011-R4b-SM-F6487 50-59 years, male 22.5
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 22.4
GTEX-1LVA9-0011-R4a-SM-F2TA2 50-59 years, male 22.4
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 22.3
GTEX-11DXY-0011-R4b-SM-GI4VR 60-69 years, male 21.7
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 21.5
GTEX-11GSO-0011-R4b-SM-GJ3R8 60-69 years, male 21.1
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 20.6
GTEX-1LH75-0011-R4a-SM-F2TAM 50-59 years, female 20.2
GTEX-1QMI2-0011-R4b-SM-F3K4R 60-69 years, male 20.2
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 19.3
GTEX-1PIIG-0011-R4a-SM-F2TAQ 30-39 years, male 19.2
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 19.0
GTEX-11OF3-0011-R4a-SM-GJ3RB 60-69 years, male 18.9
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 18.9
GTEX-1RLM8-0011-R4a-SM-F2TBL 50-59 years, male 18.9
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 18.5
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 18.4
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 18.4
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 18.1
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 17.6
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 17.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 17.5
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 17.4
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 17.4
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 17.3
GTEX-11NV4-0011-R4a-SM-GI4XC 60-69 years, male 17.1
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 16.9
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 16.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 16.7
GTEX-1JMLX-0011-R4a-SM-EY5YJ 50-59 years, male 16.7
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 16.2
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 16.2
GTEX-14BMV-0011-R4a-SM-H6Q7P 50-59 years, male 16.2
GTEX-1JN1M-0011-R4b-SM-F6494 60-69 years, female 16.1
GTEX-ZYY3-0011-R4a-SM-GQ1CY 60-69 years, female 15.9
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 15.6
GTEX-15RJE-0011-R4a-SM-H7OH4 40-49 years, male 15.6
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 15.4
GTEX-1QP6S-0011-R4b-SM-F33ZY 40-49 years, male 15.3
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 15.2
GTEX-13PLJ-0011-R4b-SM-GJ3R6 60-69 years, female 15.1
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 15.1
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 15.1
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 15.0
GTEX-1KWVE-0011-R4a-SM-F3K5X 30-39 years, male 15.0
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 14.7
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 14.6
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 14.6
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 14.6
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 14.6
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 14.4
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 14.3
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 14.3
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 14.2
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 14.1
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 14.0
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 13.9
GTEX-13FHO-0011-R4b-SM-H6611 60-69 years, male 13.8
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 13.8
GTEX-11DYG-0011-R4b-SM-GJ3RG 60-69 years, male 13.7
GTEX-1LKK1-0011-R4b-SM-EY5YA 50-59 years, female 13.6
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 13.3
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 13.3
GTEX-1R46S-0011-R4b-SM-F2TBF 60-69 years, female 13.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 13.2
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 13.1
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 13.0
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 13.0
GTEX-ZZPT-0011-R4a-SM-GPRX4 50-59 years, male 13.0
GTEX-11GS4-0011-R4a-SM-GJ3RJ 60-69 years, male 12.8
GTEX-145LU-0011-R4b-SM-5P9K1 50-59 years, male 12.8
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 12.8
GTEX-1OJC4-0011-R4a-SM-F3K54 50-59 years, female 12.7
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 12.5
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 12.4
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 12.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 12.2
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 12.1
GTEX-11ZTS-0011-R4b-SM-GINAQ 60-69 years, female 11.9
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 11.9
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 11.9
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 11.8
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 11.8
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 11.8
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 11.6
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 11.4
GTEX-1RDX4-0011-R4b-SM-F3K43 50-59 years, female 11.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 11.1
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 11.1
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 11.1
GTEX-1MJK2-0011-R4a-SM-F3426 50-59 years, male 11.0
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 11.0
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 10.9
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 10.9
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 10.6
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 10.4
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 10.3
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 10.2
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 10.2
GTEX-12WSC-0011-R4a-SM-H6Q8M 50-59 years, male 10.1
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 10.1
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 10.0
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 10.0
GTEX-12ZZY-0011-R4a-SM-GIN9F 60-69 years, male 9.7
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 9.6
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 9.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 9.5
GTEX-13QJC-0011-R4a-SM-H65ZP 60-69 years, female 9.4
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 9.3
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 9.2
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 9.2
GTEX-1NV8Z-0011-R4b-SM-G8LMZ 60-69 years, male 9.1
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 9.0
GTEX-1O9I2-0011-R4b-SM-F3K4K 50-59 years, male 9.0
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 9.0
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 8.8
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 8.8
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 8.8
GTEX-1N2EF-0011-R4a-SM-F341F 60-69 years, male 8.7
GTEX-117XS-0011-R4b-SM-GJ3PR 60-69 years, male 8.5
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 8.5
GTEX-14C5O-0011-R4b-SM-G9ERF 60-69 years, male 8.5
GTEX-1POEN-0011-R4b-SM-F3K4O 30-39 years, female 8.3
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 8.2
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 8.2
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 8.2
GTEX-1RQEC-0011-R4b-SM-F342C 60-69 years, male 8.1
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 8.0
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 7.9
GTEX-1117F-0011-R4b-SM-GI4VM 60-69 years, female 7.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 7.8
GTEX-PVOW-0011-R4A-SM-H6Q8O 40-49 years, male 7.8
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 7.8
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 7.8
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 7.6
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 7.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 7.3
GTEX-111FC-0011-R4a-SM-GIN8K 60-69 years, male 7.2
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 7.2
GTEX-1P4AB-0011-R4b-SM-F2T9S 50-59 years, male 7.2
GTEX-1PPGY-0011-R4a-SM-F3K4F 60-69 years, male 7.0
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 6.9
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 6.3
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 6.3
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 6.2
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 6.2
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 6.0
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 5.6
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 5.5
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 5.4
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 5.2
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 4.9
GTEX-1RQED-0011-R4b-SM-F2I2X 60-69 years, male 4.7
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 4.6
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 4.0
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 3.3
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 3.2
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 3.1
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 3.1
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AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

7.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 7.6
FF:10151-102I7 76 years, female 7.6

AMYGDALA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

9.9
Pig sample Sample description nTPM
Amygdala
nTPM: 10.0
Samples: 4

Max nTPM: 16.3
Min nTPM: 6.6
Sample A Female 16.3
Sample B Female 6.6
Sample C Male 8.5
Sample D Male 8.4

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3.9
Mouse sample Sample description nTPM
Amygdala
nTPM: 3.9
Samples: 4

Max nTPM: 5.1
Min nTPM: 2.7
Sample A Male 3.9
Sample B Male 5.1
Sample C Female 2.7
Sample D Female 3.9

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