We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
SERF2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • SERF2
TISSUE HIPPOCAMPAL FORMATION Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE
MIDBRAIN OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Tissue proteome
Hippocampal formation
Tissue methods
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:556.0 nTPM
HPA Brain:256.9 nTPM
GTEx:556.0 nTPM
FANTOM5:220.4 Scaled Tags Per Million
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

256.9
Sample id Sample description nTPM
Hippocampus
nTPM: 227.9
1898 Male, age 80, left hemisphere 270.4
2529 Female, age 94, left hemisphere 230.2
1855 Male, age 76, left hemisphere 229.1
2148 Female, age 91, left hemisphere 219.0
1911 Female, age 85, right hemisphere 211.8
2621 Female, age 67, right hemisphere 206.7
Dentate gyrus
nTPM: 204.2
2530 Female, age 94, left hemisphere 252.6
2010 Male, age 76, both hemispheres 227.2
2528 Male, age 74, both hemispheres 198.9
1927 Female, age 91, both hemispheres 190.8
2246 Female, age 85, both hemispheres 178.7
2531 Female, age 67, both hemispheres 176.9
Entorhinal gyrus
nTPM: 206.0
2117 Female, age 91, right hemisphere 273.0
1938 Female, age 85, left hemisphere 205.7
2764 Male, age 80, right hemisphere 204.5
1787 Male, age 76, left hemisphere 202.3
2686 Male, age 75, right hemisphere 185.4
2613 Female, age 94, left hemisphere 164.9
Hippocampus, CA1
nTPM: 216.8
2749 Male, age 80, left hemisphere 292.2
1873 Female, age 85, both hemispheres 229.7
2082 Female, age 91, right hemisphere 198.1
2527 Male, age 74, both hemispheres 184.0
2045 Male, age 76, both hemispheres 179.8
Hippocampus, CA2
nTPM: 236.2
1963 Male, age 80, left hemisphere 324.4
2249 Male, age 74, both hemispheres 265.3
1892 Male, age 76, both hemispheres 218.1
1940 Female, age 85, left hemisphere 208.7
2113 Female, age 91, right hemisphere 203.1
2437 Female, age 94, left hemisphere 197.7
Hippocampus, CA3
nTPM: 256.9
2436 Male, age 74, both hemispheres 498.6
1867 Male, age 76, both hemispheres 250.5
2137 Male, age 80, left hemisphere 234.3
1891 Female, age 85, both hemispheres 209.0
2620 Female, age 94, left hemisphere 178.4
2861 Female, age 67, both hemispheres 170.4
Parahippocampal cortex
nTPM: 178.3
2018 Male, age 76, both hemispheres 223.0
1933 Female, age 85, both hemispheres 207.3
1990 Female, age 91, right hemisphere 188.4
1850 Male, age 80, both hemispheres 181.6
2245 Female, age 91, both hemispheres 179.6
2250 Female, age 67, right hemisphere 175.7
2532 Female, age 72, left hemisphere 175.0
2622 Female, age 67, right hemisphere 158.1
2692 Male, age 74, both hemispheres 156.3
2693 Female, age 94, both hemispheres 138.4
Perirhinal gyrus
nTPM: 175.7
1794 Male, age 80, right hemisphere 201.6
1847 Female, age 91, left hemisphere 190.3
1841 Female, age 85, right hemisphere 181.2
2521 Female, age 94, right hemisphere 158.8
2848 Male, age 76, right hemisphere 146.7
Subiculum
nTPM: 202.4
2042 Male, age 76, both hemispheres 224.8
1977 Female, age 85, both hemispheres 224.7
1901 Male, age 80, both hemispheres 222.6
2729 Female, age 91, right hemisphere 210.5
2619 Male, age 74, both hemispheres 195.3
2438 Female, age 94, left hemisphere 136.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

556.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 556.0
Samples: 255

Max nTPM: 1161.0
Min nTPM: 270.3
Std nTPM: 146.9
Median nTPM: 536.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1161.0
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 1122.2
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 1037.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1021.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 990.0
GTEX-1JJEA-0011-R1b-SM-F6495 60-69 years, male 905.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 903.6
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 859.5
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 840.7
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 831.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 830.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 829.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 823.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 820.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 802.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 797.3
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 793.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 788.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 786.2
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 777.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 768.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 754.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 748.9
GTEX-14DAQ-0011-R1a-SM-G8W85 60-69 years, female 745.6
GTEX-1KANB-0011-R1a-SM-F3K5M 50-59 years, male 741.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 736.0
GTEX-1MJK2-0011-R1b-SM-F649H 50-59 years, male 735.0
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 733.9
GTEX-11DYG-0011-R1a-SM-GI4X6 60-69 years, male 732.6
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 727.1
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 726.5
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 725.8
GTEX-ZYFD-0011-R1b-SM-GRR1T 50-59 years, male 714.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 712.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 712.4
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 702.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 701.3
GTEX-1P4AB-0011-R1b-SM-F2TAV 50-59 years, male 698.4
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 698.2
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 697.4
GTEX-1MA7X-0011-R1b-SM-F2TAB 60-69 years, male 693.0
GTEX-1OJC4-0011-R1a-SM-F2TAZ 50-59 years, female 690.1
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 689.0
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 687.1
GTEX-1NV8Z-0011-R1b-SM-F647K 60-69 years, male 686.7
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 685.6
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 685.1
GTEX-1JN6P-0011-R1b-SM-G8LL3 60-69 years, male 683.7
GTEX-1O9I2-0011-R1a-SM-F2TAW 50-59 years, male 678.4
GTEX-1I19N-0011-R1b-SM-GOR1A 70-79 years, male 678.2
GTEX-1192X-0011-R1b-SM-GI4VU 50-59 years, male 668.9
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 668.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 667.8
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 667.6
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 665.2
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 663.0
GTEX-1PPGY-0011-R1b-SM-G8LN3 60-69 years, male 660.3
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 659.2
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 658.2
GTEX-12WSA-0011-R1b-SM-GI4VI 60-69 years, male 653.2
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 649.0
GTEX-14JFF-0011-R1b-SM-G8W88 60-69 years, male 642.1
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 636.2
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 635.1
GTEX-RU72-0011-R1A-SM-HAUZG 50-59 years, female 632.6
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 630.8
GTEX-1LSNL-0011-R1a-SM-F3K51 50-59 years, male 630.2
GTEX-13PVQ-0011-R1b-SM-GJ3RQ 50-59 years, male 630.1
GTEX-11OF3-0011-R1b-SM-H65ZT 60-69 years, male 629.0
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 627.2
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 626.5
GTEX-12ZZZ-0011-R1a-SM-GIN8I 60-69 years, male 626.2
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 623.8
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 622.8
GTEX-1LVAO-0011-R1a-SM-F649O 60-69 years, male 613.1
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 613.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 602.7
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 602.7
GTEX-1RNSC-0011-R1b-SM-F342D 60-69 years, male 601.0
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 600.9
GTEX-13PLJ-0011-R1a-SM-GJ3QF 60-69 years, female 599.4
GTEX-1RQEC-0011-R1b-SM-F2I2E 60-69 years, male 597.1
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 595.6
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 594.0
GTEX-1MCQQ-0011-R1a-SM-F341G 60-69 years, male 593.1
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 592.2
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 590.1
GTEX-1F52S-0011-R1a-SM-9OSX9 60-69 years, female 589.4
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 588.7
GTEX-1LVA9-0011-R1b-SM-F2TB5 50-59 years, male 587.6
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 587.5
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 586.6
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 583.7
GTEX-11NV4-0011-R1a-SM-GINAK 60-69 years, male 583.6
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 581.4
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 580.5
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 579.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 574.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 574.5
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 573.2
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 572.9
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 572.7
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 565.3
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 564.6
GTEX-1R9PO-0011-R1b-SM-F2I2G 60-69 years, female 563.5
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 562.6
GTEX-11DXY-0011-R1b-SM-GI4VQ 60-69 years, male 561.1
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 560.8
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 559.8
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 559.2
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 556.6
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 555.8
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 555.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 552.8
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 552.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 549.8
GTEX-15CHQ-0011-R1a-SM-COH27 60-69 years, male 546.0
GTEX-14PJM-0011-R1a-SM-CNPO3 50-59 years, female 545.6
GTEX-ZYY3-0011-R1b-SM-GPI92 60-69 years, female 544.4
GTEX-1JMLX-0011-R1b-SM-G9ERV 50-59 years, male 543.6
GTEX-15DYW-0011-R1a-SM-H6Q6Q 60-69 years, female 542.8
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 542.0
GTEX-1RQED-0011-R1a-SM-F3K5W 60-69 years, male 540.7
GTEX-13SLX-0011-R1a-SM-H6Q8N 50-59 years, female 538.3
GTEX-15DCD-0011-R1b-SM-6LPIJ 70-79 years, female 538.2
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 537.6
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 536.8
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 536.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 532.2
GTEX-1KD4Q-0011-R1a-SM-F3K4Z 40-49 years, male 530.1
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 530.0
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 529.8
GTEX-14BMV-0011-R1b-SM-G9ERL 50-59 years, male 529.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 527.9
GTEX-117XS-0011-R1b-SM-GJ3PQ 60-69 years, male 526.4
GTEX-N7MT-0011-R1a-SM-CNPO1 60-69 years, female 526.0
GTEX-1KWVE-0011-R1a-SM-F649B 30-39 years, male 525.8
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 525.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 525.0
GTEX-ZAK1-0011-R1a-SM-GRR1R 50-59 years, female 524.4
GTEX-1EKGG-0011-R1b-SM-9QEI1 60-69 years, male 522.7
GTEX-1C6VR-0011-R1a-SM-7MXUE 60-69 years, male 522.6
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 519.7
GTEX-1N2EF-0011-R1a-SM-F2TAT 60-69 years, male 519.5
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 519.2
GTEX-1PIIG-0011-R1a-SM-F649P 30-39 years, male 517.6
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 514.6
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 514.1
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 511.1
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 503.6
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 503.1
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 500.2
GTEX-13VXU-0011-R1a-SM-GINAT 50-59 years, male 499.8
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 499.7
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 496.3
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 496.0
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 495.1
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 494.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 494.1
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 494.0
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 492.6
GTEX-1QP6S-0011-R1b-SM-F3K59 40-49 years, male 490.4
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 489.6
GTEX-1QMI2-0011-R1b-SM-F3K5Q 60-69 years, male 489.0
GTEX-1LSVX-0011-R1a-SM-F3K5F 60-69 years, male 486.9
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 486.2
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 484.6
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 483.3
GTEX-11PRG-0011-R1b-SM-H7OHD 50-59 years, male 475.0
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 474.5
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 474.2
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 473.7
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 473.2
GTEX-1RDX4-0011-R1a-SM-F3K5H 50-59 years, female 473.0
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 472.6
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 472.1
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 471.4
GTEX-12696-0011-R1a-SM-GHWPW 60-69 years, male 470.7
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 468.9
GTEX-1JMQJ-0011-R1b-SM-F2T9P 50-59 years, male 468.1
GTEX-145LS-0011-R1b-SM-5PNUP 60-69 years, female 467.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 466.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 466.4
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 466.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 462.6
GTEX-1POEN-0011-R1b-SM-F3K3K 30-39 years, female 462.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 460.8
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 460.7
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 460.2
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 459.5
GTEX-11H98-0011-R1a-SM-GIN8O 50-59 years, male 459.1
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 458.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 455.5
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 454.5
GTEX-ZZPT-0011-R1b-SM-GNINL 50-59 years, male 453.8
GTEX-1JMQK-0011-R1a-SM-F6484 60-69 years, male 450.5
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 447.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 446.5
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 446.5
GTEX-1JMQL-0011-R1a-SM-F3K4U 50-59 years, female 445.8
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 445.4
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 442.5
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 439.7
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 438.7
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 435.8
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 434.6
GTEX-ZUA1-0011-R1a-SM-4YCE2 40-49 years, male 432.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 432.1
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 431.3
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 431.3
GTEX-1N2EE-0011-R1a-SM-F3K5K 60-69 years, male 430.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 428.8
GTEX-1JMOU-0011-R1b-SM-F341B 60-69 years, female 425.9
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 421.4
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 421.2
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 420.7
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 419.6
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 419.1
GTEX-1I1GQ-0011-R1a-SM-CY8GG 50-59 years, male 416.2
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 415.3
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 404.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 401.6
GTEX-1PWST-0011-R1b-SM-F2I38 70-79 years, male 401.4
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 399.4
GTEX-1JMPZ-0011-R1b-SM-F6497 30-39 years, male 398.1
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 397.1
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 397.0
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 391.9
GTEX-12ZZY-0011-R1a-SM-GIN9E 60-69 years, male 391.6
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 390.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 386.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 385.5
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 383.2
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 379.3
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 378.6
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 373.1
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 371.3
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 370.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 365.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 361.6
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 359.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 355.0
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 353.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 353.1
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 352.4
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 352.2
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 349.7
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 329.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 325.3
GTEX-15EO6-0011-R1b-SM-H7OGP 50-59 years, male 316.1
GTEX-15RJE-0011-R1b-SM-H6Q7N 40-49 years, male 310.5
GTEX-15SHU-0011-R1b-SM-H6Q7U 40-49 years, female 306.0
GTEX-1LH75-0011-R1a-SM-F341Y 50-59 years, female 284.0
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 281.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 270.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

220.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 220.4
FF:10169-103B7 60 years, female 283.5
FF:10153-102I9 76 years, female 157.3

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo